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Query: d1asha_ a.1.1.2 (A:) Ascaris hemoglobin, domain 1 {Pig roundworm (Ascaris suum) [TaxId: 6253]}, from SCOP207

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst ANKTRELCMKSLEHAKVDTSNEARQDGIDLYKHMFENYPPLRKYFKSREEYTAEDVQNDPFFAKQGQKILLACHVLCATYDDRETFNAYTRELLDRHARDHVHMPPEVWTDFWKLFEEYLGKKTTLDEPTKQAWHEIGREFAKEINKLast
1 -34.200IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  12  3TQEHINIIKSTIPLL----ESAGPALTQHFYQRMFSHNPELKHIFNMTHQKTGR----------QSVALFEAIAAYAKHIDNLAALTSAVERIAHKHTSFNIQPEHYVGHHLLETLRELA--PDAFTQPVEEAWTAAYFFLAQVFID 135
2 -32.800IDP00644 flavohemoprotein, putative SACOL0220 [Staphylococcus aureus subsp. aureus COL]  ali follow..  14  3TEQEKDIIKQTVPLL----KEKGTEITSIFYPKMFKAHPELLNMFN----------QTNQKRGMQSSALAQAVMAAAVNIDNLSVIKPVIMPVAYKHCALQVYAEHYVGKNLLKAIQDVT--GLEENDPVIQAWAKAYGVIADVFIQ 135
3 -32.600IDP00562 gene: hmp; nitric oxide dioxygenase YPO2908 [Yersinia pestis CO92]  ali follow..  10  3DTQTIAIVKSTIPLL----AATGPKLTAHFYERMFKHHPELKNIFNMSNQSSGD----------QREALFNAICAYATNIENLAALLPTVERIAQKHTSLNIQPEHY--PIVGEHLIATLDELFSPGQAVLDAWAKAYGVLADVFIQ 133
4 -5.840IDP01109 hypothetical protein GBAA_pXO1_0148 GBAA_pXO1_0148 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  12  2.......................EATKRYLCLYLKESQEKFISNWKKRILVHEHDPYKN-EIIKNGTHLLHVFTMYMREEINLQDIEDISKKIAQERMDAKVNIADFITNEGKKEILNTLFLLNPTGQECKVVIEQINLFFDHLIYS 126
5 -5.200IDP91435 DNA uptake lipoprotein [Vibrio vulnificus CMCP6] VV1_0485 [Vibrio vulnificus CMCP6]  ali follow..  16  116.AQDRNFMHDLFNIDRSDRDPEPVKQAFDDFKKLLERYPDSQKRMFALKNRLAEYDLATADYYLRREAWIAAINRLQKTYPDTIAARKSLKIQLEAYKQLGLQ............................................ 226
6 -5.200IDP02510 putative ribose-binding periplasmic protein (partial) [Yersinia pestis CO92] YPO2285 [Yersinia pestis CO92]  ali follow..  15  72.........PDLKRVGKEVANWDRTQGYNKMQSMLQANPDIKGVISGNDEMALGAIAALKEAGKIDQVKVGAFDGSPDAVD.................................................................. 143
7 -5.160IDP05120 gene: fliS2; flagellar protein [Clostridium difficile 630] CD0236 [Peptoclostridium difficile 630]  ali follow..  10  1..............MELDLNELNGLSKEELLLMLVD----VKYTNISKVALLNKDYLKAHNELVRVQNIFTELMVTLDQ-QWAKDMYKVYEFIKHELVKADINKDIKIIDDILPIV-----------EQIRDTWHEVYNKL...... 116
8 -5.020IDP06380 gene: ORF46; ORF46 [Human herpesvirus 8] YP_001129398 [Human herpesvirus 8]  ali follow..  11  21.DDRDLLLAPKWISF------SLSSFLKQKLLSLLRVYPPQDKLMWWSHCCDPEDIKQDPYHKGQATGLAFSVD---PQCQVPPSLRSIFRELEASVPNFSTPLDSWARQGVLLLNTVLTVEKGRAGSHEGLGWDWFTSFIISSISS 177
9 -4.780IDP90885 dihydrofolate reductase [Vibrio cholerae O1 biovar eltor str. N16961] VC0440 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  25.......LPADFAWFKRCTLGKPVVMGRKTYQSIGRPLPGRHNIV----------ISRDASLQIEGVDVVTSIEAALAKAGEVDEV------IGGGSL---YAACLPMAHKLYITEIHAKLDGDTQFPEWGSDWLER.......... 137
10 -4.760IDP05188 gene: fliS1; flagellar protein FliS [Clostridium difficile 630] CD0235 [Peptoclostridium difficile 630]  ali follow..  11  22............................QLLLMLVD----VKYTKIARGAIIDKNTRKAHRELIRVQDIFTELMVTLDQ-QWAKDMYRVYDFVRYELSRANIRKDVQIIDNVLPVI-----------EEIKDTWHEA.......... 119

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 5 8 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Clustering of highly homologous sequences to reduce the size of large protein databases. Bioinformatics. 2001 Mar;17(3):282-3.