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Query: d1b0ba_ a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) [TaxId: 244486]}, from SCOP207

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140
# Score Template Links and tools%idFirst SLSAAQKDNVKSSWAKASAAWGTAGPEFFMALFDAHDDVFAKFSGLFSGAAKGTVKNTPEMAAQAQSFKGLVSNWVDNLDNAGALEGQCKTFAANHKARGISAGQLEAAFKVLAGFMKSYGGDEGAWTAVAGALMGMIRPDMLast
1 -40.300IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  16  2.LTQEHINIIKSTIPLLESAGPALTQHFYQRMFSHNPELKHIFN-----------MTHQKTGRQSVALFEAIAAYAKHIDNLAALTSAVERIAHKHTSFNIQPEHYQIVGHHLLETLRELAPDAEAWTAAYFFLAQVFIDR. 136
2 -39.800IDP00562 gene: hmp; nitric oxide dioxygenase YPO2908 [Yersinia pestis CO92]  ali follow..  16  2.LDTQTIAIVKSTIPLLAATGPKLTAHFYERMFKHHPELKNIFN-----------MSNQSSGDQREALFNAICAYATNIENLAALLPTVERIAQKHTSLNIQPEHYPIVGEHLIATLDELFSPGDAWAKAYGVLADVFIQR. 134
3 -39.400IDP00644 flavohemoprotein, putative SACOL0220 [Staphylococcus aureus subsp. aureus COL]  ali follow..  18  2.LTEQEKDIIKQTVPLLKEKGTEITSIFYPKMFKAHPELLNMFN-----------QTNQKRGMQSSALAQAVMAAAVNIDNLSVIKPVIMPVAYKHCALQVYAEHYPIVGKNLLKAIQDVTGLEQAWAKAYGVIADVFIQ.. 135
4 -6.090IDP01109 hypothetical protein GBAA_pXO1_0148 GBAA_pXO1_0148 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  1....................MEATKRYLCLYLKESQEKFISNWKK--RILVHEHDPYKNEIIKNGTHLLHVFTMYMREEINLQDIEDISKKIAQERMDAKVNIADTNEGKKEILNTLFLLNPTGQECKVVIEQINLFFDHLI 124
5 -5.800IDP91394 hypothetical protein VV1_1133 [Vibrio vulnificus CMCP6] VV1_1133 [Vibrio vulnificus CMCP6]  ali follow..  104..RQPLFIILDATWQEAR------------KMLNKSEWLKALPQLALHGDSASNYQLRRNQQQGNLCTLEIAAELVKQLGEAHNATSMTELL.................................................. 181
6 -5.260IDP90363 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_066 [Chlamydia trachomatis D/UW-3/CX]  ali follow..  48............................LKKMKNSAPQLLKMLKTFVIDSITPRSISPKPRAPRGSK--KRRDFVNFTKTDIERVLELARQVGDKDLLARFSPKPLPSLKRELIRSIRNNIVSTELWNAYVEALSQ...... 155
7 -5.100IDP90208 gene: m139R; m139R MYXV_gp143 [Myxoma virus (strain Lausanne)]  ali follow..  50..SDDIVSILHNWYRGFIGLPNKYG-RVFKELKLFDIDAKTKYGDINTLFFMLNLNSDRCCRNNFVTLQKTIFKHTVTVYNCIEMIGLCALVAEQWKNNNVVDEMFRFIDPDMLEKIRTVLQERLAYEDL............ 187
8 -4.900IDP90142 unknown [Monkeypox virus] MPXV_ZAI1979_005_188 [Monkeypox virus]  ali follow..  11  23..IDDVRQCLTEYWSSYAYRNRQCAGQLYGTLLSFKDDAESVFIDVRELVKNMPWDNVKDCTE---IIRCYIPDEQKTIREISAIIGLCAYAATYWGGEDHPTSNSLNALFVMLGMLNY....................... 138
9 -4.810IDP04668 phaP protein [Bacillus anthracis str. `Ames Ancestor`] GBAA1327 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  1.METKPYELVDAFWKNWSQSLSLF-EQLTLETLKQQQDALHKLTSGVDELEKELQQFTAQFNNQYTDYVKQLTGNSLNQEKWKELSAHMHQLTVSKTSLSILTQTSGQFEETTKQFIEQQQLQREEAQKQLEGFLEEFKLK. 154
10 -4.720IDP02571 gene: fliS; flagellar protein FliS [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0549 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  10  22..........................KLIEMLYE---GILRFCARAKVAIRNEDIEQRVYFVKRTTAIFIELINTLN-YEKGGEVAHYLSGL--TREIQLLSLANLENNEDRINEVINVTKGLLEAWREV............ 120

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 4 7 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.