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current user: public |
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| Query: d1ecaa_ a.1.1.2 (A:) Erythrocruorin {Midge (Chironomus thummi thummi), fraction III [TaxId: 7154]}, from SCOP207 |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . | |||||||
| # | Score | Template | Links and tools | %id | First | LSADQISTVQASFDKVKGDPVGILYAVFKADPSIMAKFTQFAGKDLESIKGTAPFETHANRIVGFFSKIIGELPNIEADVNTFVASHKPRGVTHDQLNNFRAGFVSYMKAHTDFAGAEAAWGATLDTFFGMIFSKM | Last |
| 1 | -34.400 | IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961] | ali follow.. | 11 | 2 | LTQEHINIIKSTIPLLESAGPAFYQRMFSHNPELKHIFNMTHQKTGRQ-------SVALFEAIAAYAKHIDNLAALTSAVERIAHKHTSFNIQPEHYQIVGHHLLETLRELAPTQPVEEAWTAAYFFLAQVFIDR. | 136 |
| 2 | -33.700 | IDP00562 gene: hmp; nitric oxide dioxygenase YPO2908 [Yersinia pestis CO92] | ali follow.. | 9 | 2 | LDTQTIAIVKSTIPLLAATGPKFYERMFKHHPELKNIFNMSNQSSGDQ-------REALFNAICAYATNIENLAALLPTVERIAQKHTSLNIQPEHYPIVGEHLIATLDELFSGQAVLDAWAKAYGVLADVFIQR. | 134 |
| 3 | -32.900 | IDP00644 flavohemoprotein, putative SACOL0220 [Staphylococcus aureus subsp. aureus COL] | ali follow.. | 12 | 2 | LTEQEKDIIKQTVPLLKEKGTEFYPKMFKAHPELLNMFNQ-------TNQKRGMQSSALAQAVMAAAVNIDNLSVIKPVIMPVAYKHCALQVYAEHYPIVGKNLLKAIQDVTGNDPVIQAWAKAYGVIADVFIQI. | 136 |
| 4 | -5.870 | IDP06380 gene: ORF46; ORF46 [Human herpesvirus 8] YP_001129398 [Human herpesvirus 8] | ali follow.. | 12 | 21 | ..DDRDLLLAPKWISFSSFLKQKLLSLLRVYPPQDKLMWWSHCCDPEDIKQDPYHKGQATGLAFSVDPQCQVPPSLRSIFRELEASVPNFSTPSDSWARQGVLLLNTVEKGRAGSHEGLGWDWFTSFIISSISSK. | 178 |
| 5 | -5.240 | IDP05706 gene: topB; DNA topoisomerase III [Listeria monocytogenes EGD-e] lmo2756 [Listeria monocytogenes EGD-e] | ali follow.. | 6 | 414 | FTLKGKVVKSLGWKSIYGESRE------DQLTKMKK---PVKRINLETGKTKPPARFDEATLLSAMENPSKYMETTNKALAKTLGETGGLGTVATRADIIGRQLLELVPEDLKSPELTARWEQKLSKIAK...... | 560 |
| 6 | -5.150 | IDP02504 gene: ung; uracil-DNA glycosylase [Francisella tularensis subsp. tularensis SCHU S4] FTT1578c [Francisella tularensis subsp. tularensis SCHU S4] | ali follow.. | 12 | 8 | ....AEEKQKPYFKQILDFLACESAKGKVIFPTKENIFNAFKYTELDNLKDPYHNYNQAHGLAFSVQKGVDIPPSLQNIYKELARSIPEFKTPNVDWAKQGVFLLNTVEAHKANSHKDIGWETFTDTVINKISEN. | 151 |
| 7 | -4.820 | IDP90208 gene: m139R; m139R MYXV_gp143 [Myxoma virus (strain Lausanne)] | ali follow.. | 9 | 50 | .SDDIVSILHNWYRGLPNKYGRVFKELKLFDIDAKTKYGDINTLFFMLNLNSDRCCRNFSNFVTLQKTIFKHTVTVYNCIEMIG-------------------LCALVAEQWKNNNKCLNWRIVVDEMFRFIDPD. | 169 |
| 8 | -4.790 | IDP90311 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_734 [Chlamydia trachomatis D/UW-3/CX] | ali follow.. | 7 | 91 | MTDSERKDLSFVVSAAADKSS---IALAMAQGEIKGALSRIREIHLQALAEDPALIAGMKKMQ---GRDWVWNIFITELSKVFSQAASLGAFSVADVAAFASTL-GLDSGTVTSIVDGERWAELIDVVIQ...... | 217 |
| 9 | -4.700 | IDP91716 gene: STAT1; signal transducer and activator of transcription 1-alpha/beta isoform alpha [Homo sapiens] NP_009330 [Homo sapiens] | ali follow.. | 7 | 1 | .........MSQWYELQQLDSKFLEQVHQLYPEIRQYLAQWLEKQEHAANDVSFATIRFHDLLSQLDDQYSRFSLENNFLLQHNIRKSKRNLQ-DNFQEDPIQMSMIIYSCLKEER.................... | 113 |
| 10 | -4.490 | IDP05627 hypothetical protein CD1406 [Clostridium difficile 630] CD1406 [Peptoclostridium difficile 630] | ali follow.. | 10 | 136 | VNSELAPEVVDIFKELYEKKYPILIDDYDAVDEKSMSDNNTSSFCYRTIAGTNVVSNHGKGRAIDINPLQNPQVSGNDVTPKVSTVYADRSSTKFGMIKKGDDCYNAFVSR--------SW............... | 254 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Zmasek CM, Zhang Q, Ye Y, Godzik A. Surprising complexity of the ancestral apoptosis network. Genome Biol. 2007 Oct 24;8(10):R226 [Epub ahead of print] |