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Query: d2dc3a_ a.1.1.2 (A:) Cytoglobin {Human (Homo sapiens) [TaxId: 9606]}, from SCOP207

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst EELSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQLRKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEEFASDFPPETQRAWAKLRGLIYSHVTAAYKEVGWVQQVPNATTPPATLPSSLast
1 -41.600IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  12  2..LTQEHINIIKSTIPLLESAGPALTQHFYQRMFSHNPELKHIFN-----------MTHQKTGRQSVALFEAIAAYAKHIDNLAALTSAVERIAHKHT-SFNIQPEHYQIVGHHLLETLRELAPDAFTQPVEEAWTAAYFFLAQVFIDREGALYLERKQA............ 147
2 -40.000IDP00644 flavohemoprotein, putative SACOL0220 [Staphylococcus aureus subsp. aureus COL]  ali follow..  16  2..LTEQEKDIIKQTVPLLKEKGTEITSIFYPKMFKAHPELLNMFN-----------QTNQKRGMQSSALAQAVMAAAVNIDNLSVIKPVIMPVAYKHC-ALQVYAEHYPIVGKNLLKAIQDVTGLEENDPVIQAWAKAYGVIADVFIQIEKEIYDQM............... 144
3 -38.200IDP00562 gene: hmp; nitric oxide dioxygenase YPO2908 [Yersinia pestis CO92]  ali follow..  14  2..LDTQTIAIVKSTIPLLAATGPKLTAHFYERMFKHHPELKNIFN-----------MSNQSSGDQREALFNAICAYATNIENLAALLPTVERIAQKHT-SLNIQPEHYPIVGEHLIATLDELFSP--GQAVLDAWAKAYGVLADVFIQRESQIYQQSETE............ 145
4 -6.580IDP90142 unknown [Monkeypox virus] MPXV_ZAI1979_005_188 [Monkeypox virus]  ali follow..  5  18DRLTSIDRQCLTEYWSSYAYRNRQCAGQLYGTLLSFKDDAESVFIDVRELVKNMPWDNVKDCTEIIRCYIPDEQKTIREISAIIGLCAYAATYWGGEDHPTSNSLNALFVMLGMLYTIIFWRMN................................................ 149
5 -5.620IDP06380 gene: ORF46; ORF46 [Human herpesvirus 8] YP_001129398 [Human herpesvirus 8]  ali follow..  7  17SQGVDDRDLLLAPKWISF--SLSSFLKQKLLSLLRVYPPQDKLMWWSHCCDPED-LGQDPYHKGQATGLAFSVDPQCQVPPSLRSIFRELEASVPNFSTPSHGCLDSWARQGVLLLNTVLTVEKGRAGSHEGLGWDWFTSFIISSISSKLEHC................... 182
6 -5.270IDP90217 gene: m003.1L; m003.1L, m3.1 MYXV_gp004 [Myxoma virus (strain Lausanne)]  ali follow..  16  8NEFGADDILAVQDRWSATPFRDRESAGRLFAVFESFKRDAEIVFRDNSSESLIRAMLRHDSYITEACAIIGLLARVAEYWGYDDPIPTSVRVIELFMRL---ITDYEVPHLRSVINIRLQRLCSQERRDD.......................................... 151
7 -5.130IDP90208 gene: m139R; m139R MYXV_gp143 [Myxoma virus (strain Lausanne)]  ali follow..  10  45NTIDASDVSILHNWYRGFIGLPNKYG-RVFKELKLFDIDAKTKYGDINTLFFMLNLNSDRCCRNNFVTLQKTIFKHTVTVYNCIEMIGLCALVAEKCLNWRIVVDEMFRFIDPDMLEKIRTVL------QERLAYEDL.................................. 187
8 -5.130IDP91562 gene: ECs0876; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB34299 [Escherichia coli O157:H7 str. Sakai]  ali follow..  10  542.TLKDKHYANLLTMLDLNDASESDKSKIFFC--------LSAVFANISHSNVFNGIPDASKLKRYAFALLAKAHSLDESMISNQTFNTYKTVLDFNNLSNEEANQLRISSLYRDMVRYAQYRFSKVLSEWTPDAW..................................... 669
9 -4.830IDP91394 hypothetical protein VV1_1133 [Vibrio vulnificus CMCP6] VV1_1133 [Vibrio vulnificus CMCP6]  ali follow..  11  110.........ILDATWQEAR------------KMLNKSEWLKALPQLALHGDSASNYQLRRNQQQGNLCTLEIAAELVKQLGEAHNATSMTELL............................................................................... 181
10 -4.830IDP90117 virokine protein [Monkeypox virus] MPXV_ZAI1979_005_027 [Monkeypox virus]  ali follow..  11  20.............................YNDDFKKL----ILFDELVDDDDVCTLIKNMRMTLSDGPLLDRLNQPVNNVEDVKRMIAISAKVARDIGRRSEIR---WEDSFTILFRMIEKYFDDLMTD........................................... 112
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.