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Query: d2itka2 d.26.1.1 (A:51-163) Mitotic rotamase PIN1, domain 2 {Human (Homo sapiens) [TaxId: 9606]}, from SCOP207

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst EPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTELast
1 -61.900IDP91059 gene: ppiC; peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. tularensis SCHU S4] FTT_1472c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  33  2...KASARHLLV---------------------QSESECQQIKKDITEGKITFEEAARKHSLCPSGARGGDLGTFSQGQMVPEFDRVVFNDELHKVHGPVQTQFGYHLLEITS 90
2 -56.300IDP01326 peptidyl-prolyl cis-trans isomerase C VCA0953 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  31  2.ARTAAALHILV---------------------KHKEQADDILAQLKKG-AKFHVLAKKYSTCPSGKKGGDLGEFRQGQMVPAFDKACFQGEVLT-PQLVKTKFGWHVVKVLY 90
3 -44.900IDP91264 protein export protein prsA [Bacillus anthracis str. Sterne] NT05BA1100 [Bacillus anthracis str. Sterne]  ali follow..  37  131..PEIKASHILV---------------------KDEATAKKVKEELGQG-KSFEELAKQYSEDTSKEKGGDLGFFGAGKMVKEFEDAAYKLKKDEVSEPVKSQFGYHIIKVTD 220
4 -44.700IDP02319 gene: prsA; peptidylprolyl isomerase [Bacillus anthracis str. `Ames Ancestor`] GBAA1169 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  37  135..PEIKASHILV---------------------SDENEAKEIKKKLDTG-ASFEELAKQESDLLSKEKGGDLGYFHSGAMTPEFETAAYKLKIGQISDPVQSPNGYHIIKLTG 224
5 -44.700IDP91267 protein export protein prsA [Bacillus anthracis str. Sterne] NT05BA2321 [Bacillus anthracis str. Sterne]  ali follow..  36  132.KPEMKVSHILV---------------------KDEKTAKEVKEKVNNG-EDFAALAKQYSEDTSKEQGGEITGFAPGQTVKEFEEAAYKLDAGQVSEPVKTTYGYHIIKVTD 222
6 -38.600IDP04442 gene: b0053; survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) [Yersinia pestis CO92] YPO0494 [Yersinia pestis CO92]  ali follow..  25  170GDTELNLSHILIPLPENPTQQQ---------VDQAEDLANKLVADIKGG-ADFGKLAIANSADSQALKGGQMGWGKLQELPSLFAERLQSAHKGEIVGPIRSGVGFHILKVND 272
7 -34.200IDP01432 peptidyl-prolyl cis-trans isomerse D VC1918 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  31  267TAEQRNVSHILIEGNDEQK-------------------AQAILDELNAG-ADFATLAKEKSQDLSAAEGGSLGWIEPDTMDPAFEAAAFALEKGQVSGLVKSDFGYHIIRLDD 361
8 -32.200IDP02580 gene: cypD; peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella typhimurium LT2] STM0452 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  23  265QPERIRYSIIQT---------------------KTEDDAKAVLDALNKG-EDFATLAKEKSTDISARNGGDMGWLEESATVPELKNAGLKEK-GQISGVIKSSVGFLVARLDD 355
9 -29.000IDP91058 gene: surA; peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella tularensis subsp. tularensis SCHU S4] FTT_0468 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  15  204.VKLYTLKNLIVALPDSKK-----------ARQKKIDLFKKLALAVNDGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDYKEYIKELKNHQVSQPFIVNHTLQMIYIYN 305
10 -18.100IDP90386 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_355 [Chlamydia trachomatis D/UW-3/CX]  ali follow..  191QITQWTYRVLTIKAGL---------------EFLAHKIAGKVQERLNEGSSWDKELTALVLSQGGQLMCSEEFFREDAQLSVAHRQSEINFPEERCGKVLEHASGLKLFVLFN 291

FFAS is supported by the NIH grant R01-GM087218-01
1 4 0 5 8 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24