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current user: public |
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Query: d2itka2 d.26.1.1 (A:51-163) Mitotic rotamase PIN1, domain 2 {Human (Homo sapiens) [TaxId: 9606]}, from SCOP207 |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 | |||||||
# | Score | Template | Links and tools | %id | First | EPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE | Last |
1 | -61.900 | IDP91059 gene: ppiC; peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. tularensis SCHU S4] FTT_1472c [Francisella tularensis subsp. tularensis SCHU S4] | ali follow.. | 33 | 2 | ...KASARHLLV---------------------QSESECQQIKKDITEGKITFEEAARKHSLCPSGARGGDLGTFSQGQMVPEFDRVVFNDELHKVHGPVQTQFGYHLLEITS | 90 |
2 | -56.300 | IDP01326 peptidyl-prolyl cis-trans isomerase C VCA0953 [Vibrio cholerae O1 biovar El Tor str. N16961] | ali follow.. | 31 | 2 | .ARTAAALHILV---------------------KHKEQADDILAQLKKG-AKFHVLAKKYSTCPSGKKGGDLGEFRQGQMVPAFDKACFQGEVLT-PQLVKTKFGWHVVKVLY | 90 |
3 | -44.900 | IDP91264 protein export protein prsA [Bacillus anthracis str. Sterne] NT05BA1100 [Bacillus anthracis str. Sterne] | ali follow.. | 37 | 131 | ..PEIKASHILV---------------------KDEATAKKVKEELGQG-KSFEELAKQYSEDTSKEKGGDLGFFGAGKMVKEFEDAAYKLKKDEVSEPVKSQFGYHIIKVTD | 220 |
4 | -44.700 | IDP02319 gene: prsA; peptidylprolyl isomerase [Bacillus anthracis str. `Ames Ancestor`] GBAA1169 [Bacillus anthracis str. `Ames Ancestor`] | ali follow.. | 37 | 135 | ..PEIKASHILV---------------------SDENEAKEIKKKLDTG-ASFEELAKQESDLLSKEKGGDLGYFHSGAMTPEFETAAYKLKIGQISDPVQSPNGYHIIKLTG | 224 |
5 | -44.700 | IDP91267 protein export protein prsA [Bacillus anthracis str. Sterne] NT05BA2321 [Bacillus anthracis str. Sterne] | ali follow.. | 36 | 132 | .KPEMKVSHILV---------------------KDEKTAKEVKEKVNNG-EDFAALAKQYSEDTSKEQGGEITGFAPGQTVKEFEEAAYKLDAGQVSEPVKTTYGYHIIKVTD | 222 |
6 | -38.600 | IDP04442 gene: b0053; survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) [Yersinia pestis CO92] YPO0494 [Yersinia pestis CO92] | ali follow.. | 25 | 170 | GDTELNLSHILIPLPENPTQQQ---------VDQAEDLANKLVADIKGG-ADFGKLAIANSADSQALKGGQMGWGKLQELPSLFAERLQSAHKGEIVGPIRSGVGFHILKVND | 272 |
7 | -34.200 | IDP01432 peptidyl-prolyl cis-trans isomerse D VC1918 [Vibrio cholerae O1 biovar El Tor str. N16961] | ali follow.. | 31 | 267 | TAEQRNVSHILIEGNDEQK-------------------AQAILDELNAG-ADFATLAKEKSQDLSAAEGGSLGWIEPDTMDPAFEAAAFALEKGQVSGLVKSDFGYHIIRLDD | 361 |
8 | -32.200 | IDP02580 gene: cypD; peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella typhimurium LT2] STM0452 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] | ali follow.. | 23 | 265 | QPERIRYSIIQT---------------------KTEDDAKAVLDALNKG-EDFATLAKEKSTDISARNGGDMGWLEESATVPELKNAGLKEK-GQISGVIKSSVGFLVARLDD | 355 |
9 | -29.000 | IDP91058 gene: surA; peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella tularensis subsp. tularensis SCHU S4] FTT_0468 [Francisella tularensis subsp. tularensis SCHU S4] | ali follow.. | 15 | 204 | .VKLYTLKNLIVALPDSKK-----------ARQKKIDLFKKLALAVNDGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDYKEYIKELKNHQVSQPFIVNHTLQMIYIYN | 305 |
10 | -18.100 | IDP90386 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_355 [Chlamydia trachomatis D/UW-3/CX] | ali follow.. | 7 | 191 | QITQWTYRVLTIKAGL---------------EFLAHKIAGKVQERLNEGSSWDKELTALVLSQGGQLMCSEEFFREDAQLSVAHRQSEINFPEERCGKVLEHASGLKLFVLFN | 291 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Grynberg M, Li Z, Szczurek E, Godzik A. Putative type IV secretion genes in Bacillus anthracis. Trends Microbiol. 2007 May;15(5):191-5. Epub 2007 Mar 26. |