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Query: d1dlwa_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Ciliate (Paramecium caudatum) [TaxId: 5885]}, from SCOP207

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .
# Score Template Links and tools%idFirst SLFEQLGGQAAVQAVTAQFYANIQADATVATFFNGIDMPNQTNKTAAFLCAALGGPNAWTGRNLKEVHANMGVSNAQFTTVIGHLRSALTGAGVAAALVEQTVAVAETVRGDVVTVLast
1 -7.990sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1  ali follow..  19  17........SRSPLEHGTVLFARLFAEPDLLPLFQSPEFLDHIRKVMLVIDAAVTNVEDLS-ASLGRKHRAVGVKLSSFSTVGESLLYMLEKC-LGPAFTPATRAAWSQLYGAVVQA 143
2 -7.410sp|P69891|HBG1_HUMAN Hemoglobin subunit gamma-1 OS=Homo sapiens GN=HBG1 PE=1 SV=2  ali follow..  12  14SLWGKVNVEDAGGETLGRLLV---VYPWTQRFFDNPKVKAHGKKVLTSLGDALDDLKGTFAQLSELHCDKLHVDPENFKLLGNVLVTVLAIH-FGKEFTPEVQASWQKMVTAVASA 141
3 -7.220sp|P69892|HBG2_HUMAN Hemoglobin subunit gamma-2 OS=Homo sapiens GN=HBG2 PE=1 SV=2  ali follow..  12  14SLWGKVNVEDAGGETLGRLLV---VYPWTQRFFDNPKVKAHGKKVLTSLGDALDDLKGTFAQLSELHCDKLHVDPENFKLLGNVLVTVLAIH-FGKEFTPEVQASWQKMVTGVASA 141
4 -6.750sp|P02100|HBE_HUMAN Hemoglobin subunit epsilon OS=Homo sapiens GN=HBE1 PE=1 SV=2  ali follow..  10  14SLWSKMNVEEAGGEALGRLLV---VYPWTQRFFDNPKVKAHGKKVLTSFGDAMDNLKPAFAKLSELHCDKLHVDPENFKLLGNVMVIILATH-FGKEFTPEVQAAWQKLVSAVAIA 141
5 -6.420sp|P02042|HBD_HUMAN Hemoglobin subunit delta OS=Homo sapiens GN=HBD PE=1 SV=2  ali follow..  12  14ALWGKVNVDAVGGEALGRLLV---VYPWTQRFFESMGNPKVKAHGKKVLGAFLDNLKGTFSQLSELHCDKLHVDPENFRLLGNVLVCVLARNEFTPQMQAAYQKVVAGVANALAH. 144
6 -6.370sp|P29590|PML_HUMAN Probable transcription factor PML OS=Homo sapiens GN=PML PE=1 SV=3  ali   10  165..LKIDNETQKISQLASKFRVVIQPEAFFSIYSKAVSLEVGLQHFLSFLSSM--------RRPILACY-----KLWGPG--LPNFFRALEDINRLWEFQEAISGFLAALP...... 262
7 -6.200sp|Q6DN90|IQEC1_HUMAN IQ motif and SEC7 domain-containing protein 1 OS=Homo sapiens GN=IQSEC1 PE=1 SV=1  ali   15  15..IRVQGEAQKVERLIEAFSQRYCINPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKL------------EDFIKNLRGVDDGEDIPREMLMGIYERIRK........ 109
8 -6.040sp|Q6B0K9|HBM_HUMAN Hemoglobin subunit mu OS=Homo sapiens GN=HBM PE=2 SV=1  ali follow..  15  18........AGHEAQFGAELLLRLFTYPSTKVYFDATQLLSHGQRMLAAVGAAVQHVDNLRASPLADLHAVLRVDPANFPLLIQCFHVVLASH-LQDEFTVQMQAAWDKFLTGVAVV 135
9 -5.950sp|P20585|MSH3_HUMAN DNA mismatch repair protein Msh3 OS=Homo sapiens GN=MSH3 PE=1 SV=4  ali   34GIFTRMGAADNIYKGQSTFMEELTDTAEI--------IRKATSQSLVILDELGRGTSTHDGIAIA--------------ATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNY 128
10 -5.740sp|O15397|IPO8_HUMAN Importin-8 OS=Homo sapiens GN=IPO8 PE=1 SV=2  ali   178NYLNQGVVHSITWKQMKPHIQNISEDVIFSVMYKDEDEELWQEDPYEYIRMKFDIFEDYASPTTAAQTLLYTAAKEVLPKMMAFCYQILTDPNFDPRKKDGALHVIGSLAEILLK. 296

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 5 6 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.