current user: public

If you have questions about the server, please let us know.

Query: d1ngka_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbO [TaxId: 1773]}, from SCOP207

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .
# Score Template Links and tools%idFirst KSFYDAVGGAKTFDAIVSRFYAQVAEDEVLRRVYPEDDLAGAEERLRMFLEQYWGGPRTYSEQRGHPRLRMRHAPFRISLIERDAWLRCMHTAVASIDSETLDDEHRRELLDYLEMAAHSLVNSPFLast
1 -9.820sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1  ali follow..  17.........SRSPLEHGTVLFARLALEPDLLPLFQSPEFLDHIRKVMLVIDAAVTNVEDLSS----ASLGRKHRAVGVKLSSFSTVGESLLYMLEKCLGPAFTPATRAAWSQLYGAVVQAMSR... 146
2 -9.170sp|P69891|HBG1_HUMAN Hemoglobin subunit gamma-1 OS=Homo sapiens GN=HBG1 PE=1 SV=2  ali follow..  13TSLWGKVNVEDAGGETLGRLLV---VYPWTQRFFDNPKVKAHGKKVLTSLGDAIKHLDD-LKGTFAQLSELHCDKLHVDPENFKLLGNVLVTVLAIHFGKEFTPEVQASWQKMVTAVASALSSR.. 145
3 -9.090sp|P69892|HBG2_HUMAN Hemoglobin subunit gamma-2 OS=Homo sapiens GN=HBG2 PE=1 SV=2  ali follow..  13TSLWGKVNVEDAGGETLGRLLV---VYPWTQRFFDNPKVKAHGKKVLTSLGDAIKHLDDLKG---AQLSELHCDKLHVDPENFKLLGNVLVTVLAIHFGKEFTPEVQASWQKMVTGVASALSSR.. 145
4 -8.930sp|Q6B0K9|HBM_HUMAN Hemoglobin subunit mu OS=Homo sapiens GN=HBM PE=2 SV=1  ali follow..  12  11AQVWDLI--AGHEAQFGAELLLRLTVYPSTKVYFPHLSACQDATQLLSHGQRMLAAVGAAVQHVDNSPLADLHAVLRVDPANFPLLIQCFHVVLASHLQDEFTVQMQAAWDKFLTGVAVVLTEK.. 139
5 -8.820sp|P09105|HBAT_HUMAN Hemoglobin subunit theta-1 OS=Homo sapiens GN=HBQ1 PE=1 SV=2  ali follow..  11  12RALWKKL--GSNVGVYTTEALERTLAFPATKTYFSHLDLSPGSSQVRAHGQKVADALSLAVERLDDLPLSHLHAQLRVDPASFQLLGHCLLVTLARHYPGDFSPALQASLDKFLSHVISALVSE.. 140
6 -8.550sp|P69905|HBA_HUMAN Hemoglobin subunit alpha OS=Homo sapiens GN=HBA1 PE=1 SV=2  ali follow..  12KAAWGKV--GAHAGEYGAEALERMLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMP-DLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSK.. 140
7 -8.510sp|P02008|HBAZ_HUMAN Hemoglobin subunit zeta OS=Homo sapiens GN=HBZ PE=1 SV=2  ali follow..  13  12VSMWAKI--STQADTIGTETLERLLSHPQTKTYFPHFDLHPGSAQLRAHGSKVVAAVGDAVKSIDDIGLSELHAILRVDPVNFKLLSHCLLVTLAARFPADFTAEAHAAWDKFLSVVSSVLTEK.. 140
8 -8.500sp|P02100|HBE_HUMAN Hemoglobin subunit epsilon OS=Homo sapiens GN=HBE1 PE=1 SV=2  ali follow..  13TSLWSKMNVEEAGGEALGRLLV---VYPWTQRFFDNPKVKAHGKKVLTSFGDAIKNMDNLKP---AKLSELHCDKLHVDPENFKLLGNVMVIILATHFGKEFTPEVQAAWQKLVSAVAIALAHK.. 145
9 -8.130sp|P02042|HBD_HUMAN Hemoglobin subunit delta OS=Homo sapiens GN=HBD PE=1 SV=2  ali follow..  13NALWGKVNVDAVGGEALGRLLV---VYPWTQRFFESPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKSELHCDKLHVDPENFRLLGNVLVCVLARNFGKEFTPQMQAAYQKVVAGVANALAHK.. 145
10 -7.610sp|P68871|HBB_HUMAN Hemoglobin subunit beta OS=Homo sapiens GN=HBB PE=1 SV=2  ali follow..  13TALWGKVNVDEVGGEALGRLLV---VYPWTQRFFENPKVKAHGKKVLGAFSDGLAHLDNLKG----ATLSELHCKLHVDPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHK.. 145

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 5 6 1   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.