current user: public
If you have questions about the server, please let us know.

Query: d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebrafish (Danio rerio) [TaxId: 7955]}, from SCOP207

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .
# Score Template Links and tools%idFirst LGLRRAGVRKALHDPFEDGALVLYEPPAISAHDLIKADKEKLPVHVVVDPVLSKVLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPSSLVRNWYNEVGKWLGGRVQPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRLKNSDNQTYLALNSMNAQRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKRFEIPILKGRDADASDKDRAAGEQKLQELISIVNRCLIRRLast
1 -97.200sp|Q92698|RAD54_HUMAN DNA repair and recombination protein RAD54-like OS=Homo sapiens GN=RAD54L PE=1 SV=2  ali   81  1.....................................................KVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRR 245
2 -91.000sp|P46100|ATRX_HUMAN Transcriptional regulator ATRX OS=Homo sapiens GN=ATRX PE=1 SV=5  ali   30  3.RRKRIAEREREREKLREVIEIEDAKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLD---FSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVM.................. 300
3 -81.300sp|Q9Y620|RA54B_HUMAN DNA repair and recombination protein RAD54B OS=Homo sapiens GN=RAD54B PE=1 SV=1  ali   43  1............................................................KEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSI---------FYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRR 230
4 -79.400sp|Q03468|ERCC6_HUMAN DNA excision repair protein ERCC-6 OS=Homo sapiens GN=ERCC6 PE=1 SV=1  ali   27  26........................KEKRLKLEDDSEESDAEFDEGFKVPGFLFKKLFKYQQTGVRWLWE-----LHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKL-----IRDVAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRR 295
5 -77.800sp|Q9Y4B4|ARIP4_HUMAN Helicase ARIP4 OS=Homo sapiens GN=RAD54L2 PE=1 SV=4  ali   34  1.................................................................................CILAHSMGLGKTLQVISFIDVLFRHTP-----AKTVLAIVPVNTLQNWLAEFNMWLPPPEALPADNKPENDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTKALCRPGPDVVICDEGHRIKNCQASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRR 262
6 -73.800sp|Q92698|RAD54_HUMAN DNA repair and recombination protein RAD54-like OS=Homo sapiens GN=RAD54L PE=1 SV=2  ali   81  99.GLKRAGVRRALHDPLEKDALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGHR............................................................................................... 300
7 -72.800sp|O14981|BTAF1_HUMAN TATA-binding protein-associated factor 172 OS=Homo sapiens GN=BTAF1 PE=1 SV=2  ali   28  41..............................RHFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWL-----AFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQV-------KRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFL... 300
8 -72.000sp|Q5T890|RAD26_HUMAN Putative DNA repair and recombination protein RAD26-like OS=Homo sapiens GN=RAD26L PE=2 SV=1  ali   28  1.............................................................................HGGGCILGDDMGLGKTVQVISFLAAVLKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTVLHGNRKDNELIRVKQRKC----------EIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRR 232
9 -67.600sp|Q2NKX8|ERC6L_HUMAN DNA excision repair protein ERCC-6-like OS=Homo sapiens GN=ERCC6L PE=1 SV=1  ali   27  71..............................AEQGDDEFTDVCNSGLLLYRELHNQLFEHQKEGIAFLYS----LYRDGRKGGILADDMGLGKTVQIIAFLSGMFDAS-----LVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRN-------LNRIQQRNGVIITTYQMLINNWQQLSSFRWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPIQNNLQELWSLFDFACQGLLGTLKTFKMEYENPITRAREK............................ 300
10 -64.600sp|Q9Y620|RA54B_HUMAN DNA repair and recombination protein RAD54B OS=Homo sapiens GN=RAD54B PE=1 SV=1  ali   42  96...NDFQNCKPRHDPYTPNSLVMPRPD--KNHQWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSI---------FYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISL................................................................................ 300
11 -62.500sp|Q9NRZ9|HELLS_HUMAN Lymphoid-specific helicase OS=Homo sapiens GN=HELLS PE=1 SV=1  ali   31  72......................................................VMRWYQVEGMEWLRMLW-----ENGINGILADEMGLGKTVQCIATIALMIQRGVPG-----PFLVCGPLSTLPNWMAEFKRFTPD--IPTMLYHGTQEERQKLVRNIYKRKGTLQIHPVVITSFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKERE--QNVLHMLHQILTPFLLR. 300
12 -58.800sp|Q9ULG1|INO80_HUMAN Putative DNA helicase INO80 complex homolog 1 OS=Homo sapiens GN=INO80 PE=1 SV=2  ali   24  53........................................RAGEDIPQPTIFNGKLKGYQLKGMNWLANLY-----EQGINGILADEMGLGKTVQSIALLAHLAERENI-----GPFLIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDI-----ESHAENKSAIDENQLSRLHMILKPFMLRR 296
13 -57.400sp|Q5FWF4|ZRAB3_HUMAN Zinc finger Ran-binding domain-containing protein 3 OS=Homo sapiens GN=ZRANB3 PE=2 SV=2  ali   23  12..............................TPHISCVTNESDNLLDFLPDRLRAKLLPFQKDGIIFALK--------RNGRCMVADEMGLGKTIQAIGITYFYKEEWP--------LLIVVPSSLRYPWTEEIEKWIPELSPEEINVIQNKTDVRRM-----------STSKVTVLGYGLLKTLIDALNNQNFKVVIVDESHYMKSRNATRSRILLPIKARRAILLTGTPALGRPEELFMQIEALFPQKFGRWTDYAKRYCNAHI--RYFGKRPQWDCRGASNLNELHQLLSDIMIRR 256
14 -57.300sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens GN=CHD1L PE=1 SV=2  ali   28  45......................................................HLRSYQLEGVNWLAQRF-----HCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDE----GPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQ-------LKQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQR-------------QDIEKESESASELHKLLQPFLLRR 261
15 -57.000sp|Q2NKX8|ERC6L_HUMAN DNA excision repair protein ERCC-6-like OS=Homo sapiens GN=ERCC6L PE=1 SV=1  ali   27  1.......................................................................................................................IMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRN-------LNRIQQRNGVIITTYQMLINNWQQLSSFRWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPIQNNLQELWSLFDFACQGLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYFLRR 178
16 -56.800sp|P46100|ATRX_HUMAN Transcriptional regulator ATRX OS=Homo sapiens GN=ATRX PE=1 SV=5  ali   31  7.......................................................................................................................................................ATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRK 168
17 -56.600sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Homo sapiens GN=SMARCA5 PE=1 SV=1  ali   28  29......................................................KLRDYQVRGLNWLISLY-----ENGINGILADEMGLGKTLQTISLLGYMKHY----RNIPGPHMVLVPKSTLHNWMSEFKRWVPT--LRSVCLIGDKEQRAAFVRDVLLPGEW----DVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGD------------QKLVERLHMVLRPFLLRR 245
18 -56.500sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens GN=SMARCA1 PE=1 SV=2  ali   29  32......................................................PLRDYQIRGLNWLISLY-----ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGP-----MVLVPKSTLHNWMNEFKRWVPS--LRVICFVGDKDARAAFIRDEMMPGEW----DVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGD------------QKLVERLHAVLKPFLLRR 248
19 -56.200sp|Q9Y4B4|ARIP4_HUMAN Helicase ARIP4 OS=Homo sapiens GN=RAD54L2 PE=1 SV=4  ali   21  69...ESVSEDDEEEEKGGTHVNDVLNQRDALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERSGFGCILAHSMGLGKTLQVISFIDVLFRHTP-----AKTVLAIVPVNTLQNWLAEFNMWLPPPEALPADNKPEEDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTKTKKRSHPVIIDLDEEDRQQEFRREFEK..................................................................................... 300
20 -55.600sp|Q9H4L7|SMRCD_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 OS=Homo sapiens GN=SMARCAD1 PE=1 SV=2  ali   26  46......................................................SLKPYQKVGLNWL-----ALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNNG-----PHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRF-----NIHSRYEDYNVIVTTYNCASDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSTSEIRRMFSSKT------KSADEQSIYEKERIAHAKQIIKPFILRR 272
21 -55.400sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2 PE=1 SV=2  ali   31  33......................................................ELRDYQLEGLNWLAHS------CKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY----GPFLIVVPLSTLTSWQREFEIWAPEINV-VVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHG----------------KGRENGYQSLHKVLEPFLLRR 250
22 -55.200sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1 PE=1 SV=2  ali   29  30......................................................ELRDYQLNGLNWLAHS------CKGNSCILADEMGLGKTIQTISFLNYLFHEHQLY----GPFLLVVPLSTLTSWQREIQTWASQMNA-VVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHG----------------KGREYGYASLHKELEPFLLRR 247
23 -55.000sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2  ali   28  3......................................................VLKQYQIKGLEWLVSLY-----NNNLNGILADEMGLGKTIQTIALITYLMEHKRI-----GPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLR-------SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETI--LIIRRLHKVLRPFLLRR 229
24 -54.900sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8 PE=1 SV=5  ali   30  60......................................................QLREYQLEGVNWLLFN------YNRQNCILADEMGLGKTIQSIAFLQEVYNVGIHG-----PFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQY-DSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD----------------KTEEQVQKLQAILKPMMLRR 282
25 -54.800sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7 PE=1 SV=3  ali   29  67......................................................KLREYQLEGVNWLLFN------YNMRNCILADEMGLGKTIQSITFLYEIYLKGIHG-----PFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYKDPQGRVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGD----------------KTEEQVQKLQAILKPMMLRR 289
26 -54.700sp|Q9NZC9|SMAL1_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 OS=Homo sapiens GN=SMARCAL1 PE=1 SV=1  ali   26  83..IAKVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQRAGVNFA--------IAKGGRLLLADDMGLGKTIQAICIAAFYRKEWP--------LLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTA-------------GLINIVSFDLLSKLEK-QLKTPFKVVIIDESHFLKNSRTARCRAAMPVVAKRVILLSGTPAMSRPAELYTQIIAVKPT.................................................. 300
27 -53.600sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=3  ali   26  2.......................................ATTQVKTPIPLLLRGQLREYQHIGLDWLVTMY-----EKKLNGILADEMGLGKTIQTISLLAHLACEKGN-----GPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQ--------TKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL-----TGMIEGSQEYNEGLVKRLHKVLRPFLLRR 240
28 -52.700sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6 PE=1 SV=4  ali   28  10......................................................QLREYQLEGMNWLLFN------YNRKNCILADEMGLGKTIQSITFLSEIFLRGIHG-----PFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQY-DAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD----------------KTEEQVKKLQSILKPMMLRR 232
29 -52.700sp|Q96L91|EP400_HUMAN E1A-binding protein p400 OS=Homo sapiens GN=EP400 PE=1 SV=4  ali   22  26........................................TTSVKFNAPSLLYGALRDYQKIGLDWLAKLY-----RKNLNGILADEAGLGKTVQIIAFFAHLACNEGN-----GPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKRQ--------AEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELWTMVHFLVPGI------SRPYLSSPL-----RAPSEESQDYYHKVVIRLHRVTQPFILRR 257
30 -52.300sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5 PE=1 SV=1  ali   27  99......................................................TLHPYQLEGLNWLRFS------AQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSK----GPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN.............................................. 300
31 -51.300sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9 OS=Homo sapiens GN=CHD9 PE=1 SV=2  ali   30  109......................................................QLREYQLEGLNWLLFN------YNRRNCILADEMGLGKTIQSITFLYEILLTGIRG-----PFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQY-DSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPS.............................................. 300
32 -50.700sp|Q9Y4B4|ARIP4_HUMAN Helicase ARIP4 OS=Homo sapiens GN=RAD54L2 PE=1 SV=4  ali   40  1..........................................................................................................................................................................................ALCRPGPDVVICDEGHRIKNCQASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRR 112
33 -50.600sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3 PE=1 SV=3  ali   25  3.............................................................................QGTDTILADEMGLGKTIQTIVFLYSLYKEGHTK----GPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD---------------ISKEDQIKKLHDLLGPHMLRR 217
34 -50.600sp|Q14527|HLTF_HUMAN Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2  ali   18  95..................................IESSDSEEIETSELPQKMKGKLKNVQSETKGRA----------KAGSSKVIEDVAFACALTSSVPTTKKKMKKTDVEERPRTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIRE--------PALLSKQDIVLTTYNILTHDYGTLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPIQNSLKDLWSLL........................................................ 300
35 -50.300sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens GN=SMARCA2 PE=1 SV=2  ali   29  109........................................SERVEKQSALLINGTLKHYQLQGLEWMVSLY-----NNNLNGILADEMGLGKTIQTIALITYLMEHKRL-----GPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLR-------SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNHYVAPRRILLTGTPLQNKLPELWALLNFLLP................................................... 300
36 -49.900sp|Q9NZC9|SMAL1_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 OS=Homo sapiens GN=SMARCAL1 PE=1 SV=1  ali   25  1..............................................................................GGRLLLADDMGLGKTIQAICIAAFYRKEWP--------LLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTA-------------GLINIVSFDLLSKLEKQL-KTPFKVVIIDESHFLKNSRTARCRAAMPVVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWDYSGSS-----NLGELKLLLEEAVMLRR 195
37 -49.800sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens GN=SMARCA2 PE=1 SV=2  ali   28  1.......................................................................................MGLGKTIQTIALITYLMEHKRLNGP-----LIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLR-------SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETI--LIIRRLHKVLRPFLLRR 199
38 -49.200sp|Q5T890|RAD26_HUMAN Putative DNA repair and recombination protein RAD26-like OS=Homo sapiens GN=RAD26L PE=2 SV=1  ali   25  120.........................................SDNGDSIPYTINRYLRDYQREGTRFLYGHY-----IHGGGCILGDDMGLGKTVQVISFLAAVLHKKGTREDIENMFLIVAPLSVLYNWKDELDTWGY---FRVTVLHGNRKDNE-------LIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMK.................................................................................. 300
39 -47.700sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4 PE=1 SV=2  ali   26  1.....................................................................................DEMGLGKTVQTAVFLYSLYKEGHSK----GPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFAD----------------AKEDQIKKLHDMLGPHMLRR 207
40 -46.000sp|O14981|BTAF1_HUMAN TATA-binding protein-associated factor 172 OS=Homo sapiens GN=BTAF1 PE=1 SV=2  ali   31  1..........................................................................................................................................REYLNPLHYTGPPTERIRLQHQV-------KRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLLRR 153
41 -44.900sp|Q03468|ERCC6_HUMAN DNA excision repair protein ERCC-6 OS=Homo sapiens GN=ERCC6 PE=1 SV=1  ali   30  6..............................................................................................................................................................KKEKLIRDVAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRR 145
42 -40.500sp|Q9NRZ9|HELLS_HUMAN Lymphoid-specific helicase OS=Homo sapiens GN=HELLS PE=1 SV=1  ali   29  1.................................................................................................................................................LYHGTQEERQKLVRNIYKRKGTLQIHPVVITSFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKERE--QNVLHMLHQILTPFLLRR 151
43 -40.200sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4 PE=1 SV=2  ali   25  125......................................................TLHPYQMEGLNWLRFS------AQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSK----GPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLL........................................................................ 300
44 -40.200sp|P46100|ATRX_HUMAN Transcriptional regulator ATRX OS=Homo sapiens GN=ATRX PE=1 SV=5  ali   29  153.RRKRIAEREREREKLREVIEISPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKPGSGCILAHCMGLGKTLQVVSFLHTVLLCD---KLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDE.......................................................................................................................................................... 299
45 -39.500sp|Q149N8|SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH OS=Homo sapiens GN=SHPRH PE=1 SV=2  ali   18  63.................................................................................CGELDQIDRKPRVQCLKCHLWQHAKVAMEPVSTRATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFL-------AEQDIVIITYDVLRSELNYLVAVEWWRICLDEAQMVECPTVKAAEMAQRLSGINRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHWWVRLLYRPYCKKN---------------PQHLYSFIAKIL... 300
46 -37.600sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5 PE=1 SV=1  ali   22  1...................................................................................................................PYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD----------------SKEDQIKKLHDLLGPHMLRR 181
47 -37.600sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9 OS=Homo sapiens GN=CHD9 PE=1 SV=2  ali   26  9..................................................................................................................GPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQY-DSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGD----------------KTEEQVQKLQAILKPMMLRR 181
48 -37.500sp|Q14527|HLTF_HUMAN Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2  ali   22  3..........................................................................................KKMLKKGACAVE--SKKTDVEERPRTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPAL--------LSKQDIVLTTYNILTKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPIQNSLKDLWSLLSFLKLKPFIDREWWHRTIQRPVTMGD------------EGGLRRLQSLIKNITLRR 194
49 -37.400sp|Q9UNY4|TTF2_HUMAN Transcription termination factor 2 OS=Homo sapiens GN=TTF2 PE=1 SV=2  ali   25  1..........................................................................................GKTLTMIALILT-LSKDDSCDFTSHGTLIICPASLIHHWKNEVEKRVNSNKLRVYLYHGPNRDSRARV---------LSTYDIVITTYSLVAKEIPTLLRIAWARIILDEAHNVKNPRVQTSIAVCKLQACARWAVTGTPIQNNLLDMYSLLKFLRCSPFDEFNLWRSQVDNGSKKG----------------GERLSILTKSLLLRR 220
50 -36.800sp|Q9UNY4|TTF2_HUMAN Transcription termination factor 2 OS=Homo sapiens GN=TTF2 PE=1 SV=2  ali   26  101....................................ESCPGETVVAEDPAGLKVPLLLHQKQALAWL----LWRESQKPQGGILADDMGLGKTLTMIALILT-LSKDDSCDFTSHGTLIICPASLIHHWKNEVEKRVNSNKLRVYLYHGPNRDSRARV---------LSTYDIVITTYSLVAKEIPTLLRIAWARIILDEAHNVKNPRVQTS...................................................................................... 300
51 -36.700sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3 PE=1 SV=3  ali   25  135......................................................TLHMYQLEGLNWLRFS------AQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTK----GPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLN.................................................................................. 300
52 -36.100sp|Q9ULG1|INO80_HUMAN Putative DNA helicase INO80 complex homolog 1 OS=Homo sapiens GN=INO80 PE=1 SV=2  ali   24  25...........................................................................................................................................................................HVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSR-----LHMILKPFMLRR 146
53 -35.000sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2  ali   27  139........................................TERVDKQSALMVNGVLKQYQIKGLEWLVSLY-----NNNLNGILADEMGLGKTIQTIALITYLMEHKRI-----GPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLR-------SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH................................................................................ 300
54 -33.100sp|Q92698|RAD54_HUMAN DNA repair and recombination protein RAD54-like OS=Homo sapiens GN=RAD54L PE=1 SV=2  ali   81  1...........................................................................................................................................................................................................LKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRR 95
55 -32.700sp|O14981|BTAF1_HUMAN TATA-binding protein-associated factor 172 OS=Homo sapiens GN=BTAF1 PE=1 SV=2  ali   26  191..............................RHFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWL-----AFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKPSLVVCPPTLTGHWVDEVGKFCS................................................................................................................................................................ 300
56 -32.200sp|Q149N8|SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH OS=Homo sapiens GN=SHPRH PE=1 SV=2  ali   16  2.....................................................PVLRPYQREAVNWMYNPYTGCIIRE-LGGILADEMGLGKTVEVLALILTHTRQDVKPSHYFGGKLKKTEIQNIEFEPKEKVQ-VSILSIYKYVSSIYRYDVQRNRSLLKRMLKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDICDKTKKQAVGSPRKIQKETRKSGNKDTDSEYLPSDTSDDDDDPYYYYYKSRRNRSKLRKKLVPSTKKGKSQPFINPDSQGH.................... 300
57 -31.800sp|Q9H4L7|SMRCD_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 OS=Homo sapiens GN=SMARCAD1 PE=1 SV=2  ali   27  1..............................................................................................................................................................................VTTYNCAISSSDLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRM------SSKTKSADEQSIYEKERIAHAKQIIKPFILRR 122
58 -30.700sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6 PE=1 SV=4  ali   26  160......................................................QLREYQLEGMNWLLFN------YNRKNCILADEMGLGKTIQSITFLSEIFLRGIHG-----PFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQY-DAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA................................................................................................. 300
59 -30.400sp|Q5T890|RAD26_HUMAN Putative DNA repair and recombination protein RAD26-like OS=Homo sapiens GN=RAD26L PE=2 SV=1  ali   26  1........................................................................................................................................................................................................................ALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRR 82
60 -30.300sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=3  ali   24  152.......................................ATTQVKTPIPLLLRGQLREYQHIGLDWLVTMY-----EKKLNGILADEMGLGKTIQTISLLAHLACEKGN-----GPHLIIVPTSVMLNWEMELKRWCPS--FKILTYYGAQKERKLKRQGWTKPNAFH----VCITSYKLVLQDHQAFRRKNWRYLILDEAQN............................................................................................... 300
61 -29.700sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8 PE=1 SV=5  ali   33  21...........................................................................................................................................................................DALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD----------------KTEEQVQKLQAILKPMMLRR 132
62 -29.700sp|Q96L91|EP400_HUMAN E1A-binding protein p400 OS=Homo sapiens GN=EP400 PE=1 SV=4  ali   20  1....................................................................................................................................................................................FFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELWTMVHFLVPGI------SRPYLSSPLRAPSEESQDYYHKVVIR-----LHRVTQPFILRR 107
63 -29.100sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7 PE=1 SV=3  ali   30  28...........................................................................................................................................................................HAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGD----------------KTEEQVQKLQAILKPMMLRR 139
64 -28.400sp|Q9Y620|RA54B_HUMAN DNA repair and recombination protein RAD54B OS=Homo sapiens GN=RAD54B PE=1 SV=1  ali   40  1..........................................................................................................................................................................................................................SCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRR 80
65 -27.700sp|Q14527|HLTF_HUMAN Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2  ali   14  65..............................DKLFEDLKEDDKTHEMEPAEAIETPLLPHQKQALAWMYNTITNFSEKD-HGGILADDMGLGKTLTAIAVILTNFHDGRPNNTSEKADGLSKDASRCSEQPSISDI--SKFRMSELSSSRPKRRKTAVQYIESSDSEEIETSELPQKMKGKLKNVQSETKKAGSSKVIEDVAFACALTSSVPT...................................................................................... 300
66 -27.100sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1 PE=1 SV=2  ali   28  180......................................................ELRDYQLNGLNWLAHS------CKGNSCILADEMGLGKTIQTISFLNYLFHE----HQLYGPFLLVVPLSTLTSWQREIQTWASQMNA-VVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEIL..................................................................................................................... 296
67 -26.900sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2 PE=1 SV=2  ali   29  183......................................................ELRDYQLEGLNWLAHS------CKNNSVILADEMGLGKTIQTISFLSYLFHQ----HQLYGPFLIVVPLSTLTSWQREFEIWAPEINV-VVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEIL..................................................................................................................... 299
68 -26.800sp|Q03468|ERCC6_HUMAN DNA excision repair protein ERCC-6 OS=Homo sapiens GN=ERCC6 PE=1 SV=1  ali   23  187...................................EESDAEFDEGFKVPGFLFKKLFKYQQTGVRWLWELH-----CQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGS-GPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHET...................................................................................................................................................... 300
69 -26.500sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=3  ali   33  1...........................................................................................................................................................................................................IKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL-----TGMIEGSQEYNEGLVKRLHKVLRPFLLRR 90
70 -26.500sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Homo sapiens GN=SMARCA5 PE=1 SV=1  ali   29  176...................................................KWGKLRDYQVRGLNWLISLY-----ENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGP-----MVLVPKSTLHNWMSEFKRWVPT--LRSVCLIGDKEQRAAFVRDVLLPGEW----DVCVTSYEMLIKEKSVFKK............................................................................................................ 299
71 -26.100sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens GN=SMARCA1 PE=1 SV=2  ali   31  179...................................................KGGPLRDYQIRGLNWLISLY-----ENGVNGILADEMGLGKTLQTIALLGYLKHYRNI-----GPHMVLVPKSTLHNWMNEFKRWVPS--LRVICFVGDKDARAAFIRDEMMPGEW----DVCVTSYEMVIKEKSVF.............................................................................................................. 300
72 -25.900sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens GN=CHD1L PE=1 SV=2  ali   29  1...............................................................................................................................................................................TTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEDFIQRYQ--------------DIEKESESASELHKLLQPFLLRR 111
73 -25.900sp|Q96L91|EP400_HUMAN E1A-binding protein p400 OS=Homo sapiens GN=EP400 PE=1 SV=4  ali   26  176........................................TTSVKFNAPSLLYGALRDYQKIGLDWLAKLY-----RKNLNGILADEAGLGKTVQIIAFFAHLACNEGN-----GPHLVVVRSCNILKWELELKRWCPG--LKILSYIGSHRELKAKRQEWAEPNSFH----VCITSYTQ...................................................................................................................... 300
74 -25.800sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens GN=SMARCA1 PE=1 SV=2  ali   26  1............................................................................................................................................................................................KKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGD------------QKLVERLHAVLKPFLLRR 98
75 -25.100sp|A3KN83|SBNO1_HUMAN Protein strawberry notch homolog 1 OS=Homo sapiens GN=SBNO1 PE=1 SV=1  ali   13  138.....................................................GWLSALQLEAITYAAQQHETFLNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLS-----RKRALWFSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSK-------HNGSVKKGVIFATYSSLKQLLHWCGDDFDGVIVFDECHKAKNLCPVGSS..................................................................................... 300
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 4 6 8   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.