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current user: public |
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Query: d3ci3a1 a.25.2.0 (A:2-188) automated matches {Lactobacillus reuteri [TaxId: 1598]}, from SCOP207 |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . | |||||||
# | Score | Template | Links and tools | %id | First | KIYTKNGDKGQTRIIGKQILYKNDPRVAAYGEVDELNSWVGYTKSLINSHTQVLSNELEEIQQLLFDCGHDLATPADDERHSFKFKQEQPTVWLEEKIDNYTQVVPAVKKFILPGGTQLASALHVARTITRRAERQIVQLMREEQINQDVLIFINRLSDYFFAAARYANYLEQQPDMLYRNSKDVFR | Last |
1 | -85.100 | sp|Q96EY8|MMAB_HUMAN Cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial OS=Homo sapiens GN=MMAB PE=1 SV=1 | ali follow.. | 37 | 57 | KIYTKTGDKGFSSTFTGERRPKDDQVFEAVGTTDELSSAIGFALELVTEKGHTFAEELQKIQCTLQDVGSALATPCSSAREKYTTFKAGPILELEQWIDKYTSQLPPLTAFILPSGGKISSALHFCRAVCRRAERRVVPLVQMGETDANVAKFLNRLSDYLFTLARYAAMKEGNQEKIYMKNDPSAE | 246 |
2 | -8.580 | sp|Q9P2G9|KLHL8_HUMAN Kelch-like protein 8 OS=Homo sapiens GN=KLHL8 PE=2 SV=4 | ali | 10 | 11 | HVYAVGGNDGMASLSSVERYDPHLDKWIEVKEMGQRRAGNGVSK----------------LHGCLYVVGGFDDNSPLSSVERYDPRSNKWDYVAALTTPRGGVGIATVMGKIFAGGHNGNAYLNTVEAFDPVLNRWELVGSVSHCRAGAGVAVCSCLTSQIRDVG...................... | 160 |
3 | -8.240 | sp|O95140|MFN2_HUMAN Mitofusin-2 OS=Homo sapiens GN=MFN2 PE=1 SV=3 | ali | 11 | 90 | .................EVLARRHMKVAFFGRTSNINAMLW--DKVLPSGIGHTTNCFLRVEGFLLTEGSEEKRSAKTVNQLAHALHQDKQLHAGSLVSVMWPNSK-LKDDLVPGIDVTTELDSWIDKFCLDADVFVLVANSESTLMQTEKHFFHKVSENIFILNNRWDASASEPEYMEEVRRQHME | 279 |
4 | -7.800 | sp|Q8IWA4|MFN1_HUMAN Mitofusin-1 OS=Homo sapiens GN=MFN1 PE=1 SV=2 | ali | 10 | 69 | .................EVLSRRHMKVAFFGRTSSINAMLW--DKVLPSGIGHITNCFLSVEGYLMTEGSDEKKSVKTVNQLAHALHMDKDLKAGCLVRVFWPKAK-LRDDLVPGTDVTTELDSWIDKFCLDADVFVLVANSESTLMNTEKHFFHKVNENIFILNNRWDASASEPEYMEDVRRQHME | 258 |
5 | -7.210 | sp|Q494V2|CCD37_HUMAN Coiled-coil domain-containing protein 37 OS=Homo sapiens GN=CCDC37 PE=1 SV=1 | ali | 11 | 144 | .................................................EPENMSGYIKQ-KRQMFLLQYALDVKRREIQRLETLATKEE-ARLERAEKSLEKDAALFDEFVRENDCSSVQAMRAAEKETKAKIEKILEIRDLTTQIVNIKSEISRFEDTLKHYKVYKDFLYKLSPKEWLEEQEKKH | 279 |
6 | -7.170 | sp|Q9P265|DIP2B_HUMAN Disco-interacting protein 2 homolog B OS=Homo sapiens GN=DIP2B PE=1 SV=3 | ali | 10 | 80 | TLWARTGYLG---VRRTEATGERHDALYVVGALDETLELRGLIETSVSRIHRSIAECAVFTWTNLLVVVVELCGSEQEA--------LDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDS...................................................... | 211 |
7 | -7.020 | sp|Q14689|DIP2A_HUMAN Disco-interacting protein 2 homolog A OS=Homo sapiens GN=DIP2A PE=1 SV=2 | ali | 12 | 35 | RPFTRTGLLGFI---------GPDNLVFIVGKLDGLMVTGVR-----RHNADDVVATALAVEPMKFVYRGRIAVFSVTVLHDDRIVLVAEQRRVLQAIDSIHQVGVYCLALVPANTLPKAPLGGIHISETKQR...................................................... | 166 |
8 | -6.990 | sp|Q9P265|DIP2B_HUMAN Disco-interacting protein 2 homolog B OS=Homo sapiens GN=DIP2B PE=1 SV=3 | ali | 11 | 39 | VPFIRSGLLGFV---------GPGSLVFVVGKMDGLLMVSGR-----RHNADDIVATGLAVESIVFSVDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQL...................................................... | 170 |
9 | -6.860 | sp|Q9Y2E4|DIP2C_HUMAN Disco-interacting protein 2 homolog C OS=Homo sapiens GN=DIP2C PE=2 SV=2 | ali | 10 | 62 | ..WARTGYLG---LRRTELTGERHDALYVVGALDEAMELRGMIETSVIRAHKSVTECAVFTWTNLLVVVVELDGSEQEA--------LDLVPLVTNVVLEEHYLIVGVVVVVDIGVIPINSRGEKQRMHLRDG...................................................... | 191 |
10 | -6.800 | sp|Q9BYB0|SHAN3_HUMAN SH3 and multiple ankyrin repeat domains protein 3 OS=Homo sapiens GN=SHANK3 PE=1 SV=2 | ali | 12 | 5 | .......DSGVEEA---DTRSSSDPHLETTSTI----STVSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSPLGKGPVTFRDPLLKQSSDSELMAQQHHA---SAGLASAAGPARPRYLFQRRSKDPVESRGLPGPEDDKPTVISELSSRLQQLNK..................... | 157 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |