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Query: d1it2a_ a.1.1.2 (A:) Hagfish hemoglobin {Inshore hagfish (Eptatretus burgeri) [TaxId: 7764]}, from SCOP207

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst PIIDQGPLPTLTDGDKKAINKIWPKIYKEYEQYSLNILLRFLKCFPQAQASFPKFSTKKSNLEQDPEVKHQAVVIFNKVNEIINSMDNQEEIIKSLKDLSQKHKTVFKVDSIWFKELSSIFVSTIDGGAEFEKLFSIICILLRSAYLast
1 -5.840PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]  ali follow..  6  250...KKPNLEDRFQPSDSLMTETLARVEQKNFSKAKQAYRILSLKYPEKSGFFADQIRAIEKLQEN................................................................................. 313
2 -4.580PB019278 gi|154508461|ref|ZP_02044103.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]gi|153798095|gb|EDN80515.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]  ali follow..  16  6...................................NFLDAMFAPYPASTRLTDAKVELRAMMEDAADAIASGMTHNEAVGRVITDFGNLQEIAPVLG................................................. 68
3 -4.360PB000795 Q74Z21_ASHGO/1-280 PB000795; Pfam-B_795;  ali follow..  19  204......................................ADLVWPNWQARALYIDFWMLGDAARELPDNSWQKHRARELGNLVMNMFDDVSTVDKCRKFLQK............................................. 268
4 -4.280HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  8  26PIIQPDRMENI---DYHLSISMGNNLSYSDNYQKEAYKNYVFEKHHITEAEFD---------SSMVWYTRHTEELASLYKKLGERFRSEKKHMQELLALREN............................................ 119
5 -4.000HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;  ali follow..  20  1..............................................................................MSKKKRGEERMKEEDNILKKVGKKN---FKVPEGYFENLTSEVMGKLPEKEG................ 50
6 -3.940PB076697 gi|160881556|ref|YP_001560524.1| hypothetical protein Cphy_3432 [Clostridium phytofermentans ISDg]gi|160430222|gb|ABX43785.1| conserved hypothetical protein [Clostridium phytofermentans ISDg]  ali follow..  10  128.........TYPDIGVRIAHKNFTVLDKYLKSVGTKLL---YVQAPYKVNRDN---NQLPYGLKDYPNKNADKLLEGLNKLKIDYID----FREVFANNFLDYPSLFFNTDHHWTTEAAFF--------AYQYMLDYM........ 238
7 -3.460PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;  ali follow..  12  193..................IDSVYPLFLCLLMAFSATVYESMQVFVPDTWEHF-YFNPTLSPFKVPFILSVFLLSIWLFLIVALAVLDDL......................................................... 262
8 -3.360PB019388 gi|83589066|ref|YP_429075.1| Radical SAM [Moorella thermoacetica ATCC 39073]gi|83571980|gb|ABC18532.1| Radical SAM [Moorella thermoacetica ATCC 39073]  ali follow..  7  5.....................................FGYLFLDRPPY------------QVLASSAITYEEMLRLHAIEGLLKYYGNSHLADHAFAYLAATAFDGSYF--AIYEALAAWWEARLRRGHSQRDLFNHLASFAIHLA 101
9 -3.260PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;  ali follow..  9  39.........QMMQMQTNQMVRALMLDDATAA--------KFTPIYEKYLKELRECRMMNFKPRARKDAAQGTEANTAKETP-KPVMTD-AEIAKMLKDQFAQSRKMLDIREKYYNEFSKIL-QIMKIYQQEKSNMNKFRKEFDR.. 165
10 -3.030PB011130 gi|88806557|ref|ZP_01122074.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]gi|88783389|gb|EAR14561.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]  ali follow..  12  7........INLANMLFHIDENAYQKLLRYLEAV-----KRSFAGTAGSDEIIADIEARIAELFYEKMENERQVITQKEVDAVIAIMGQPEDYQV.................................................... 87
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 0 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10.