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Query: d1jfla2 c.78.2.1 (A:116-228) Aspartate racemase {Pyrococcus horikoshii OT3 [TaxId: 70601]}, from SCOP207

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110
# Score Template Links and tools%idFirst FKKAGLLATTGTIVSGVYEKEFSKYGVEIMTPTEDEQKDVMRGIYEGVKAGNLKLGRELLLKTAKILEERGAECIIAGCTEVSVVLKQDDLKVPLIDPMDVIAEVAVKVALEKLast
1 -6.250HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;  ali follow..  15  1.................LQTNYKRQRMNIFDIAKQNQEKAWQVIKN--------------TNIIQIWEDAGAKINLVGSLRTGLLMKHRDIDFHIY................. 65
2 -4.470PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]  ali follow..  23  23.KKTGLFITLGADPAGEHGESMLKVGRELLNEGGNEQGAIDPKVIEEMKEMAAKMGDKAIHLITPERQAT........................................... 98
3 -3.620PB001404 Q2S5L8_SALRD/1-256 PB001404; Pfam-B_1404;  ali follow..  12  191.................YFDAGKGALEGEFTPHYTRQDSIYMDLHDELRAAVDQFDASQPTFGGADLFFNG.......................................... 244
4 -3.110PB007011 gi|160888195|ref|ZP_02069198.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]gi|156862330|gb|EDO55761.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]  ali follow..  7  10.KYVIRIICEGEKTEPLFFTSLCDK-LSWIRLSRKKLNEGVDEAWAVFDKDEHPARKDAFEEAEKLIDDKKVNIAFSSSFEYYLLLHFEYLYHPF.................. 160
5 -2.640PB000795 Q74Z21_ASHGO/1-280 PB000795; Pfam-B_795;  ali follow..  8  201LQKADLVWPNWQARALYIDFWMLGDAARELPDNSWQKHRARELGNLVMNMSTVDKCRKFLQKEFFDKYTDDPKV....................................... 280
6 -2.360PB022697 Q5LAY4_BACFN/1-165 PB022697; Pfam-B_22697;  ali follow..  7  47.......EQHSLLAYQIFRDEVMFGGFCQLIQNGYGGYIFDNPFAKVMRLWGAEDFSKLVYKAKKIYDAHRHDLEKERTEDEFMAMYEQYEAFDDLEEEYLDIEEEVTALVAS 152
7 -2.210PB019388 gi|83589066|ref|YP_429075.1| Radical SAM [Moorella thermoacetica ATCC 39073]gi|83571980|gb|ABC18532.1| Radical SAM [Moorella thermoacetica ATCC 39073]  ali follow..  12  17.....VLASSAI-----YEEMLRLHAIEGLLKYYGNSHLADHAFAYLAATAFDGSYFAIYEALAAWWEARGLLRRGHSQRDLFNHLAS......................... 95
8 -1.940PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;  ali follow..  10  23................FYCNFLKGVFLLRIAVVDGQGGGIGKHITARLRQGTNAAATVAMIKAGANEGATGERAIIYNAPRVEAITGSLAIILA................... 111
9 -1.830HGC00965 gi|163282470|dbj|BABD01028218.1|2.0 TMP01310;  ali follow..  6  24.NKNSFSGNEDGMRYLITPGKRSVPDPDGGEEAKKEEAILTVDLWPEPWTLDKTDPALRRREIFP-MTEEGRTAVAQYLND................................ 102
10 -1.820PB015879 Q5LJ14_BACFN/120-411 PB015879; Pfam-B_15879;  ali follow..  9  1.....VAWENDLTAFRAYGPALQAFGYDIWTKYNTTEPVVEARYEGELNPDMKAKIAELGKTDPHVDHGNGLDCY-LGGGTTALMAGDTIVYPYCYATQEILDNGPLRFTVK. 128
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Damiano JS, Stehlik C, Pio F, Godzik A., Reed JC. CLAN, a novel human CED-4-like gene. Genomics. 2001 Jul;75(1-3):77-83.