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Query: d3etja1 b.84.2.1 (A:277-355) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), C-domain {Escherichia coli [TaxId: 562]}, from SCOP207

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .
# Score Template Links and tools%idFirst NNPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFGLast
1 -3.600PB004476 gi|139436894|ref|ZP_01771054.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]gi|133776541|gb|EBA40361.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]  ali follow..  9  44............................FSQVAYPNTIIAGVDVSFSNASSAATKVNSAWK.................. 76
2 -3.390PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;  ali follow..  9  79.....ITHLYDELPHHAVQSLKHRLLTYFGKTTYYRIYRKERYITIQEQDYIRDSFVR..................... 131
3 -3.380PB046158 _JGI.0336690_ 2004028347 [Human Gut Community Subject 8]  ali follow..  14  72HGKQTIKQLNAQGVQLSNIKITDENIKSFDRVA---RKYGLVFFKAKDVDVMTAAFREYAGVELKKKQVKKPSVRKKL. 162
4 -2.420PB012472 gi|62259485|gb|AAX77857.1| unknown protein [synthetic construct]  ali follow..  17  268..............................KAINFSDKA-----LNMQIQVNRKSIEDLENKL................ 296
5 -2.340PB062605 Q9F6T7_BACTN/1-105 PB062605; Pfam-B_62605;  ali follow..  8  62......................GRAAYDIGRNDGSRMETGHAGRV.................................. 84
6 -2.330PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821;  ali follow..  14  1......MTLLGDKTASP-------------DTGTPVPGPGGMAVTYEQVATGGLPVAGLERPVVPRLSAGLK....... 54
7 -2.310PB014998 gi|86133284|ref|ZP_01051866.1| hypothetical protein MED152_01230 [Tenacibaculum sp. MED152]gi|85820147|gb|EAQ41294.1| hypothetical protein MED152_01230 [Polaribacter dokdonensis MED152]  ali follow..  15  144......................................MNTLYLFGLENDWVHPELKHLIETKIIHESKGTKARGKHI. 183
8 -2.220HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066;  ali follow..  12  32NELEDLQQAVGGDIEMTYPFDDEVGILLNGNGKFEGLPLGTFLVVGLTEDDFTSLTPEQIEKFKE.............. 112
9 -2.170PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791;  ali follow..  17  111...SYSYALLDENNNGMIITYGRSETVTYAKPVKDGK--SNYSLSVEELQALQRAKENTIDTLELQGFRS......... 177
10 -2.170PB025553 _HOMD.0078651_ pint_c_1_4510 Prevotella intermedia 17 [1755134 - 1755736] ORF  ali follow..  22  71....................................RENGHLQINKVVMQALTELHTQLLASSKFPFYSAE........ 105
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 8 6 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Awobuluyi M, Yang J, Ye Y, Chatterton JE, Godzik A, Lipton SA, Zhang D. Subunit-specific roles of glycine-binding domains in activation of NR1/NR3N-methyl-D-aspartate receptors. Mol Pharmacol. 2007 Jan;71(1):112-22. Epub 2006 Oct 17.