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Query: d3g46a_ a.1.1.2 (A:) Hemoglobin I {Ark clam (Scapharca inaequivalvis) [TaxId: 6561]}, from SCOP207

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst PSVYDAAAQLTADVKKDLRDSWKVIGSDKKGNGVALMTTLFADNQETIGYFKRLGDVSQGMANDKLRGHSITLMYALQNFIDQLDNPDDLVCVVEKFAVNHITRKISAAEFGKINGPIKKVLASKNFGDKYANAWAKLVAVVQAALLast
1 -6.980PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]  ali follow..  249.FKKPNLEDRFQPSDSLMTETLARVEQKNFSKAKQAYRILSLKYPEKSGFFDQIRAIEKLQEN................................................................................... 313
2 -4.360HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  26PENIIQPDRMEN-DYHLSISMGNNLSYSDNYQKEAYKNYVFEKHHITEAEFDS--------SMVWYTRHTEELASLYKKLGERFRSEKKHMQELLALRENKPAVSLPGDTVDVWYDRKLYWLTDVPLANKVT.............. 151
3 -4.080PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;  ali follow..  10  193.................IDSVYPLFLCLLMAFSATVYESMQVFVPDTWEHFYFNPTLSPFKVPFILSVFLLSIWLFLIVALAVLDDL........................................................... 262
4 -3.990HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;  ali follow..  10  1............................................................................MSKKKRGEERMKEEDNILKKVGKKN-SFKVPEGYFENLTSEVMGKLPEKE.................... 49
5 -3.690PB014998 gi|86133284|ref|ZP_01051866.1| hypothetical protein MED152_01230 [Tenacibaculum sp. MED152]gi|85820147|gb|EAQ41294.1| hypothetical protein MED152_01230 [Polaribacter dokdonensis MED152]  ali follow..  117..........NEHIQEIIETGFDWLITPQKIATMNTLYLFGLENDWVHPELKHLIETKIIHESKGTKARGKHILNLIEKHQKS............................................................... 193
6 -3.560PB019388 gi|83589066|ref|YP_429075.1| Radical SAM [Moorella thermoacetica ATCC 39073]gi|83571980|gb|ABC18532.1| Radical SAM [Moorella thermoacetica ATCC 39073]  ali follow..  14PYQVLASSAITYEEMLRLHAIEGLLKYYGNSHLADHAFAYLAATAFDGSYFAIYEALAAWWEARGLLRRGHSQRDLFNHLASFAIH............................................................ 99
7 -3.540PB076697 gi|160881556|ref|YP_001560524.1| hypothetical protein Cphy_3432 [Clostridium phytofermentans ISDg]gi|160430222|gb|ABX43785.1| conserved hypothetical protein [Clostridium phytofermentans ISDg]  ali follow..  128........TYPDIGVRIAHKNFTVLDKYLKSVGTKLL---YVQAPYKVNRDN--NQLPYGLKDYPNKNADKLLEGLNKLKIDYID----FREVFANNFLDYPSLFFNTDHH-----------------------WTTAYQYMLDYM 238
8 -3.280PB000795 Q74Z21_ASHGO/1-280 PB000795; Pfam-B_795;  ali follow..  204.....................................ADLVWPNWQARALYIDFWMLGDAAREPDNSWQKHRARELGNLVMNMFDDVSTVDKCRKFLQKEFFDKYTDDPKV................................... 280
9 -3.150PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;  ali follow..  39........QMMQMQTNQMVRALMLDDATAA--------KFTPIYEKYLKELRECRMMNFKPRARKDAAQGTEANTAKETPKPVMTDAEIAKMLKDQFAQSRKMLDIREKYYNEFSKIL............................ 140
10 -3.010PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;  ali follow..  2............EGHEEVRTGWSVVDGQGGGIGKHITARLRQELPPEVEILA---GTNAAATVAMIKAGANEGATGERAIIYNAPRVEAITGSLAIILADAMLGELTPAMAAAIAAS............................. 129

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 5 6 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.