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Query: d4i0va_ a.1.1.1 (A:) automated matches {Synechococcus sp. [TaxId: 32049]}, from SCOP207

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120
# Score Template Links and tools%idFirst ASLYEKLGGAAAVDLAVEKFYGKVLADERVNRFFVNTDMAKQKQHQKDFMTYAFGGTDRFPGRSMRAAHQDLVENAGLTDVHFDAIAENLVLTLQELNVSQDLIDEVVTIVGSVQHRNDVLNRLast
1 -4.690PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;  ali follow..  73................................YYDDEELDRYAGV----------LPEEYNTEAVEEFEEILST---LQEEEVPSWIRSLQ--MRQIQMPISIKEQALFIVSEHRIQ...... 142
2 -3.130HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066;  ali follow..  15  35EDLQQAVGGDIEMTYPFDDEVGILLNGN----KFEGLPLNRALYDDHGQVYDAIAGTFLVVGLTEDDF-------TSLTPEQIEKFKEKYQSP.............................. 117
3 -3.120HGC00150 gi|162733542|dbj|BAAZ01030454.1|1.0 TMP01074;  ali follow..  15...IDELG-----AQAARNLYAGKANAQVVNYLLESPRFLDLTYILEQYFNDTVAAGYAAQNQLYTTISSLTRKTVKTEAGEQAARDIAHLRTSVYQADLVTIENQFMLAVKEVKKEIG.... 127
4 -2.940HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  10  27.....................ENIIQPDRMENILYDYHL----------SISMGNNLSYSDNYQKEAYKNYVFEKHHITEAEFDSSMVWYTRHTEELSLYKKLGERFRSEKKHMQELLALREN 119
5 -2.810PB092941 Q45777_BACTN/1-139 PB092941; Pfam-B_92941;  ali follow..  12  11...ITPFGGIFCVMEEFDALLSNII-DSTLGPRTKTFGYQYSEIFRSLMCVYFCGGSCVEDISTHLMSHLSFHPVLRSCSA------DTILRAIKELTVPNITYTSSVSGKSYDFNMADRMNE 123
6 -2.800PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821;  ali follow..  87.LVASSVDGSRDIETIAHRVSGRF-------------GREVSADNVRYLIEQKLDPLGVTVPEGREEEDISAPRSDLLLALKGHRVI-----------FNERRVATIAGALAWLHRPVVVL.. 182
7 -2.710PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]  ali follow..  16  70.NALKNVAGSTEAEKKMKEYCAKVGIVEGVFNYVFNSD----STFTSALKRGSLKGTYSVSPEDKTVTLRYTVGNKKLTVSTLTAHVVLSGNEL-TLLFNADKLLKFLSTVSSISSNTTL... 186
8 -2.680PB004996 Q5NNS6_ZYMMO/1-150 PB004996; Pfam-B_4996;  ali follow..  13  6.VLFERLS---------SSFRRRFRLGVQEQQYLANKGMETILEHGKDFIAQRLAGHPVFLAQHATGT-HRIEAGKSLSQEEQAYILDVIAHWLDLQKEVPPKKTKAATLNLPKKRKSK.... 137
9 -2.320PB001404 Q2S5L8_SALRD/1-256 PB001404; Pfam-B_1404;  ali follow..  132DTRYGGGPNGSNFLRTVTNAETLISELEGKPRQVNRLAATRIMRVLTFQRLTDVYGDVPYFDAGKGALEGEFTPHYTRQDSIYMDLHDELRAAVDQFDASQPTFGG................. 237
10 -2.300PB047024 _Gut.Meta.Jp.0098985_ gi|162869273|dbj|BABB01000734.1||6 (+ 5047:5650~0 complete)  ali follow..  111.............................................VCEMFIDRVSASKNYQKEKYTD----------------KSALEYYEKSVDHYMIHPDTKAMLEYLLVMLSVKGE.... 168

FFAS is supported by the NIH grant R01-GM087218-01
1 4 5 9 0 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.