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current user: public |
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Query: d1asha_ a.1.1.2 (A:) Ascaris hemoglobin, domain 1 {Pig roundworm (Ascaris suum) [TaxId: 6253]}, from SCOP207 |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . | |||||||
# | Score | Template | Links and tools | %id | First | ANKTRELCMKSLEHAKVDTSNEARQDGIDLYKHMFENYPPLRKYFKSREEYTAEDVQNDPFFAKQGQKILLACHVLCATYDDRETFNAYTRELLDRHARDHVHMPPEVWTDFWKLFEEYLGKKTTLDEPTKQAWHEIGREFAKEINK | Last |
1 | -8.570 | sp|Q8IX21|F178A_HUMAN Protein FAM178A OS=Homo sapiens GN=FAM178A PE=1 SV=2 | ali | 9 | 15 | ..........................GEEIFNKIFNQYTLDLRDSGFIGQSAVEKLILKSGKTDQIFLTTQGLTSAYHYVQCPVPVLKWLFRMMSVH------TDCIVSVQILSTLMEITIRNDTFSDSPVWPWIPSLSDVAAVFFN | 135 |
2 | -8.310 | tr|F5H085|F5H085_HUMAN Uncharacterized protein OS=Homo sapiens GN=CABIN1 PE=4 SV=1 | ali | 11 | 4 | ..........................................RSRRGIWRIPVDEIDRPGSFAWHMNRSIVLLLKVLAQLRDHSTLLKVSSMLQR.................................................... | 56 |
3 | -8.310 | tr|B5MEB3|B5MEB3_HUMAN Calcineurin binding protein 1, isoform CRA_c OS=Homo sapiens GN=CABIN1 PE=4 SV=1 | ali | 11 | 4 | ..........................................RSRRGIWRIPVDEIDRPGSFAWHMNRSIVLLLKVLAQLRDHSTLLKVSSMLQR.................................................... | 56 |
4 | -7.500 | sp|Q5TH69|BIG3_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo sapiens GN=ARFGEF3 PE=1 SV=3 | ali | 7 | 27 | SNCPRQHQPPTLDLLFELLRDVTKTPGPGFGIYAVVHLPVMSVWLRRSHKDHSYWDMASANFKHAIGLSCELVVEHIQSFLHSSMINTMLKDLFELLVACVAKPTETISRVGCSCIRYVLTAGPVFTEEM---WRLACCALQDAFSA | 178 |
5 | -7.130 | sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens GN=DENND4A PE=1 SV=2 | ali | 9 | 19 | .........................................QPLYILWNAHTQKYPMVHLLQKSDNSFNQELLKSMVKSIKMNDVYGPMSQILETLNKCPHFKRQRSLYREILFLSLVALGREDAFDKEYKMAYDRLTPSQVKSTHN | 128 |
6 | -7.080 | tr|E9PPP7|E9PPP7_HUMAN Uncharacterized protein OS=Homo sapiens GN=C8orf73 PE=4 SV=1 | ali | 9 | 2 | ..VLADLALYTAACLEEAGFAGTQATVLTLSSAL----------------------ARGERLEDQVHALVRGLLAQVPSLAEGRPALRVLSALALEHAR--------------DVVCALLPRSLPADRVAAELWRSL.......... | 104 |
7 | -6.910 | sp|A6NGR9|CH073_HUMAN Putative uncharacterized protein C8orf73 OS=Homo sapiens GN=C8orf73 PE=2 SV=2 | ali | 9 | 2 | ..VLADLALYTAACLEEAGFAGTQATVLTLSSAL----------------------ARGERLEDQVHALVRGLLAQVPSLAEGRPALRVLSALALEHAR--------------DVVCALLPRSLPADRVAAELWRSL.......... | 104 |
8 | -6.850 | sp|Q9Y6J0|CABIN_HUMAN Calcineurin-binding protein cabin-1 OS=Homo sapiens GN=CABIN1 PE=1 SV=1 | ali | 11 | 17 | PQHYKSLYRLAFLYTYSKTHRNLQWARDVLLGSLFCERNK-TNFFNGIWRIPVDEIDRPGSFAWHMNRSIVLLLKVLAQLRDHSTLLKV.......................................................... | 118 |
9 | -6.210 | sp|Q9H579|CT132_HUMAN Uncharacterized protein C20orf132 OS=Homo sapiens GN=C20orf132 PE=2 SV=2 | ali | 7 | 338 | SNELCQFIMTTFDTLKTLKHPCIQRSAGELLLTL---------------------AKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVRPKYTD--------------IVLSFLLCHPVPYNRHLAEVWRWILWRLLRKLQK | 464 |
10 | -5.890 | sp|Q0P6D6|CCD15_HUMAN Coiled-coil domain-containing protein 15 OS=Homo sapiens GN=CCDC15 PE=2 SV=2 | ali | 18 | 1 | ............EALRAQIQEKMQLYNITL--------PPLCCCGPDFWDAHPDTCANNCIFYKNHRAYTRALHSFINSCDVPGTLRVAIHNFASAHRR................................................ | 82 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Zhang B, Jaroszewski L, Rychlewski L, Godzik A. Similarities and differences between nonhomologous proteins with similar folds: evaluation of threading strategies. Fold Des. 1997;2(5):307-17. |