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current user: public |
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Query: d1ecaa_ a.1.1.2 (A:) Erythrocruorin {Midge (Chironomus thummi thummi), fraction III [TaxId: 7154]}, from SCOP207 |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . | |||||||
# | Score | Template | Links and tools | %id | First | LSADQISTVQASFDKVKGDPVGILYAVFKADPSIMAKFTQFAGKDLESIKGTAPFETHANRIVGFFSKIIGELPNIEADVNTFVASHKPRGVTHDQLNNFRAGFVSYMKAHTDFAGAEAAWGATLDTFFGMIFSKM | Last |
1 | -7.340 | sp|Q8TAG9|EXOC6_HUMAN Exocyst complex component 6 OS=Homo sapiens GN=EXOC6 PE=1 SV=3 | ali | 6 | 1 | ..........................LVDFSPRCLHIYSVLGDEETFENYYRKQRKKQARLVLQPQSNMHETVDGYRRYFTQIVG-----------FFVVEDHILHVTQGLVTRAYTDELWNMALSKIIAVLRAHS | 101 |
2 | -7.330 | sp|Q9Y2D4|EXC6B_HUMAN Exocyst complex component 6B OS=Homo sapiens GN=EXOC6B PE=1 SV=3 | ali | 9 | 6 | ...........................FSPVYRCLHIYSVLGARETFENYYRKQRRKQARLVLQPPSNMHETLDGYRKYFNQIVG-----------FFVVEDHILHTTQGLVNRAYIDELWEMALSKTIAALRTHS | 103 |
3 | -6.940 | sp|Q6UWF9|F180A_HUMAN Protein FAM180A OS=Homo sapiens GN=FAM180A PE=2 SV=1 | ali | 7 | 9 | ...........................................IKDEELASLRKASDFRTVCNNVIPKSIPDIRRLSASLSSHPGI-----LKKEDFETVLTLAYTAYRTALSHGHQKDIWAQSLVSLFQALRHDL | 97 |
4 | -6.650 | sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens GN=DENND4A PE=1 SV=2 | ali | 8 | 4 | ........IQMLWDNMKLHQ--------DPGQPLYILWNAHTQKYPMVHLLQKSDNSFNQELLKSMVKSIKM-NDVYGPMSQILETLNKCPHFKRQRSLYREILFLSLRENIDIDAFDKEYKMAYDRLTPSQVKST | 126 |
5 | -6.620 | sp|Q9Y3R5|DOP2_HUMAN Protein dopey-2 OS=Homo sapiens GN=DOPEY2 PE=1 SV=5 | ali | 6 | 1 | ......SVYFKTTKTIRQKILDFLNPLTAHLGAVAAVWSRKKAQRHSKMKIIPTASASQLTLVDLVCALTLQTDTLLHLVKEVVKRPPQVKGGDEKSPLVDIPVLQFCYQRLPVPALQENFSSLLGVLKESVQLNL | 139 |
6 | -6.540 | sp|Q13393|PLD1_HUMAN Phospholipase D1 OS=Homo sapiens GN=PLD1 PE=1 SV=1 | ali | 13 | 11 | ......KFFKEVWVSTAARNATIYDKVFRCLPN-----------EVHNLIQLRDFINKPVLAKEDPIRAEEELKKIRGFLVQF..................................................... | 77 |
7 | -6.410 | sp|O14939|PLD2_HUMAN Phospholipase D2 OS=Homo sapiens GN=PLD2 PE=1 SV=2 | ali | 12 | 4 | LRDPICDDFFQLWQDMAESNANIYEQIFRCLPS-----------ATRSLRTLREYVAVEPLATVSPPLARSELTQVQGHLVHF..................................................... | 76 |
8 | -6.210 | tr|F5H085|F5H085_HUMAN Uncharacterized protein OS=Homo sapiens GN=CABIN1 PE=4 SV=1 | ali | 9 | 4 | ...................................RSRRGIWRIPVDEIDRPGSFAWHMNRSIVLLLKVLAQLRDHSTLLKVSSMLQRTPDQGKKY---------------LRDADRQVLAQRAFILTVKVLEDTL | 89 |
9 | -6.210 | tr|B5MEB3|B5MEB3_HUMAN Calcineurin binding protein 1, isoform CRA_c OS=Homo sapiens GN=CABIN1 PE=4 SV=1 | ali | 9 | 4 | ...................................RSRRGIWRIPVDEIDRPGSFAWHMNRSIVLLLKVLAQLRDHSTLLKVSSMLQRTPDQGKKY---------------LRDADRQVLAQRAFILTVKVLEDTL | 89 |
10 | -5.930 | sp|Q8IX21|F178A_HUMAN Protein FAM178A OS=Homo sapiens GN=FAM178A PE=1 SV=2 | ali | 7 | 15 | ...................GEEIFNKIFNQYTLDLRDSGFIGQSAVEKLILKSGKTDQIFLTLTSAYHYVQCPVPVLKWLFRMMSVHTDCIVSVQILSTLMEITIRNDTF---SDSPVWPWIPSLSDVAAVFFN.. | 135 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10. |