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Query: d1x9fc_ a.1.1.2 (C:) Extracellular dodecameric hemoglobin (erythrocruorin), subunit III (globin C) {Common earthworm (Lumbricus terrestris) [TaxId: 6398]}, from SCOP207

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .
# Score Template Links and tools%idFirst HEHCCSEEDHRIVQKQWDILWRDTESSKIKIGFGRLLLTKLAKDIPEVNDLFKRVDIEHAEGPKFSAHALRILNGLDLAINLLDDPPALDAALDHLAHQHEVREGVQKAHFKKFGEILATGLPQVLDDYDALAWKSCLKGILTKISSRLLast
1 -8.080sp|Q96EV8|DTBP1_HUMAN Dysbindin OS=Homo sapiens GN=DTNBP1 PE=1 SV=1  ali   10  13.............EDTWAALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLTHLEASFEEVENNLLHLEDL..................................................... 95
2 -7.970tr|D6RID1|D6RID1_HUMAN Uncharacterized protein OS=Homo sapiens GN=DTNBP1 PE=4 SV=1  ali   10  21.............EDTWAALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLTHLEASFEEVENNLLHLEDL..................................................... 103
3 -6.260sp|P21359|NF1_HUMAN Neurofibromin OS=Homo sapiens GN=NF1 PE=1 SV=2  ali   14  6.....................................MVKLIHADPKL-----LLCNPRKQGPETQGSTAELITGLVQLVPQSHMPEIAQEAMEALLVLHQLDSDAPVETFWEISSQMLFYICKKLTSHQMLSSTEILKWLREILIC.. 116
4 -5.590sp|Q6ZMJ4|IL34_HUMAN Interleukin-34 OS=Homo sapiens GN=IL34 PE=1 SV=1  ali   11  66........SERELRYLWVLVSLSA----------ESVQDVLLEGHP---------------SWKYLQEVETLLLNVQQGLTDVEVSPKVESVLSLLNAPGPNLKLVRPKALDNCFRVMELLYCSCCKQSSVLNWQD............. 170
5 -5.570sp|Q86X10|RLGPB_HUMAN Ral GTPase-activating protein subunit beta OS=Homo sapiens GN=RALGAPB PE=1 SV=1  ali   13  82.....TVKYCVDVYTDWALVLPKDSIPLPVIKEPNQYVQTILK---HLQNLFVPRQEQGSSQIRLCLQVLRAIQKLARESSLMAREEVLLLFLLQINDILLAPPTVQGGIAENLAEKLIGVLFEVW-PAVVEQWSKVICALTSRLLRFT 252
6 -5.290sp|Q6TDU7|CASC1_HUMAN Cancer susceptibility candidate protein 1 OS=Homo sapiens GN=CASC1 PE=2 SV=2  ali   12  9.......KQETKLLSQWKHYIQCDGSPDPSVAQEMNTFISLWKEKTNE---------TFEEVIEKSKVVLNLIEKLKFILLETPPCDLQDKNIIQYQESILQLQELLHLKFGVATEILLKQASTLADLDSGNMWANL............ 142
7 -5.240sp|Q6UWF9|F180A_HUMAN Protein FAM180A OS=Homo sapiens GN=FAM180A PE=2 SV=1  ali   11  2.........................................................SPDLQISIKDEELASLRKASDFRTVCNNPKSIPDIRRLSASLSSHPGILKKEDFERTVLTLAYTAYRT-HGHQKDIWAQSLVSLFQALRHDL 97
8 -5.190sp|Q8IX21|F178A_HUMAN Protein FAM178A OS=Homo sapiens GN=FAM178A PE=1 SV=2  ali   12  15.................................GEEIFNKIFNQYTLDLRDSGFIGQSAVEKLILKSGKTDQIGFLTSAYHYVQCPVPVLKWLFRMMSVHTDCI-VSVQILSTLMEITIR--NDTFSDSPVWPWIPSLSDVAAVFFN.. 135
9 -5.140sp|O43156|TTI1_HUMAN TEL2-interacting protein 1 homolog OS=Homo sapiens GN=TTI1 PE=1 SV=3  ali   11  1..............................GSKCGDFLRSRFCKDPKLAGSLVTQAPISARAGPVYSHTLAVLQGLGPLCERLDLGEGDLNKVADACLIY-----LSVKQPVKLQEAARSVFLHLMKVDPDSTWFLLNEL......... 113
10 -5.120tr|F5H085|F5H085_HUMAN Uncharacterized protein OS=Homo sapiens GN=CABIN1 PE=4 SV=1  ali   15  6...............................................RRGIWRIPVDEIDRPGSFAWHMNRSIVLLLKVLAQLRDHSTLLKVSSMLQRTDQGKKYLRDADRQVLAQRAFILTVKVLEDTL................... 89

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 8 0 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Jaroszewski L, Bierzynski A, Godzik A. Multiple model approach--dealing with alignment ambiguities in protein modeling. Pac Symp Biocomput. 1997;:328-39.