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Query: d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebrafish (Danio rerio) [TaxId: 7955]}, from SCOP207

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst LGLRRAGVRKALHDPFEDGALVLYEPPAISAHDLIKADKEKLPVHVVVDPVLSKVLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPSSLVRNWYNEVGKWLGGRVQPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRLKNSDNQTYLALNSMNAQRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKRFEIPILKGRDADASDKDRAAGEQKLQELISIVNRCLIRRLast
1 -6.720tr|B4DET3|B4DET3_HUMAN Uncharacterized protein OS=Homo sapiens GN=NPC1 PE=2 SV=1  ali   10  3...............................................................VYFVLEEGHDYTSSKGQNMVCCNNDSLVQQIFNAA-------------QLDNYTRIGFAPS---SWIDDYFDWVKPQSSCCRVDNITDQ--ASVVDPACVRCRPLTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRVGATYFMTYHTVLQTS--------DFIDA--LKKARLIASNVTETM.................................. 183
2 -6.720sp|O15118|NPC1_HUMAN Niemann-Pick C1 protein OS=Homo sapiens GN=NPC1 PE=1 SV=2  ali   10  3...............................................................VYFVLEEGHDYTSSKGQNMVCCNNDSLVQQIFNAA-------------QLDNYTRIGFAPS---SWIDDYFDWVKPQSSCCRVDNITDQ--ASVVDPACVRCRPLTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRVGATYFMTYHTVLQTS--------DFIDA--LKKARLIASNVTETM.................................. 183
3 -5.920tr|F8WDW8|F8WDW8_HUMAN Uncharacterized protein OS=Homo sapiens GN=CASD1 PE=4 SV=1  ali   6  1.................................................................................................................................................MAALAYNLGKREINHYFSVRSAKVLALVAVLLLAACHLASRRYRGNDSCEYLLSSGRFLGEKVWQPHSCMMHKYKISMKTFLLKTRLHQL--KWIFCGILKLMVL................................................ 103
4 -5.270sp|Q9UHC9|NPCL1_HUMAN Niemann-Pick C1-like protein 1 OS=Homo sapiens GN=NPC1L1 PE=1 SV=1  ali   12  7...............................................................VYFVTTLGYNFSSEAGMNAICCNNFSFTQKIQYAT-------------EFPEQSYLAIPAS---SWVDDFIDWLTPSSCCRLYISGPNKDKSTVNSLNCLKNCMSITMGSVRPSVEQFHKYLPWFLNDRPNIKCPKGGLAAYSTSVNLYSGTISAHCNLYLLDSASRFMAYHKPLKNSQDYTE.................................................... 198
5 -4.960sp|P57076|CU059_HUMAN Uncharacterized protein C21orf59 OS=Homo sapiens GN=C21orf59 PE=1 SV=1  ali   14  7......................................................................................................................................................................................................KMKQVLKKTIEEAKAIISKKQVEAGVCVTMEMVKDALDQLRGAVMIVYPMGLPPYDPIRMEFEN.................................... 70
6 -4.960tr|F8VZ95|F8VZ95_HUMAN Uncharacterized protein OS=Homo sapiens GN=C21orf59 PE=4 SV=1  ali   14  7......................................................................................................................................................................................................KMKQVLKKTIEEAKAIISKKQVEAGVCVTMEMVKDALDQLRGAVMIVYPMGLPPYDPIRMEFEN.................................... 70
7 -4.960tr|C9J818|C9J818_HUMAN Uncharacterized protein OS=Homo sapiens GN=C21orf59 PE=4 SV=1  ali   14  7......................................................................................................................................................................................................KMKQVLKKTIEEAKAIISKKQVEAGVCVTMEMVKDALDQLRGAVMIVYPMGLPPYDPIRMEFEN.................................... 70
8 -4.890sp|Q03167|TGBR3_HUMAN Transforming growth factor beta receptor type 3 OS=Homo sapiens GN=TGFBR3 PE=1 SV=3  ali   15  29............................................................................TVLSGCASRGTTGLPQEVHVLNLVTLHLNPISSVHIHHKSVVFLLNSPHPLVWHLKTERLATGVSRLFLVSEGSVVQFS............................................................................................................................................... 120
9 -4.670tr|F8WDG3|F8WDG3_HUMAN Uncharacterized protein OS=Homo sapiens GN=C6orf25 PE=4 SV=1  ali   20  13...............................................................................................................................................................................................RVNLSCGGVSHPIRWVWAPSFPACKGLSKGRRPILSGTPTVPPLQPFVGRLRSLDSAAAGRWVGARTGSFGPGLVAAQAPAPATDSTT................... 107
10 -4.610sp|Q8TB96|TIP_HUMAN T-cell immunomodulatory protein OS=Homo sapiens GN=ITFG1 PE=1 SV=1  ali   17  56.......................................................................................LGLGRSANFLDHLYVGIPRPSGEKPNSQLIVIPYPHNVPRSWSAKL..................................................................................................................................................................... 112
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.