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Query: d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}, from SCOP207

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst FQLLEPYNIKANLRPYQIKGFSWMRFMNKLGFGICLADDMGLGKTLQTIAVFSDAKKENELTPSLVICPLSVLKNWEEELSKFAPHLRFAVFHEDRSKIKLEDYDIILTTYAVLLRDTRLKEVEWKYIVIDEAQNIKNPQTKIFKAVKELKSKYRIALTGTPIENKVDDLWSIMTFLNPGLLGSYSEFKSKFATPIKKGDNMAKEELKAIISPFILRRTKYDKAIINDLPLast
1 -7.320tr|Q5VUY5|Q5VUY5_HUMAN Chromosome 1 open reading frame 158 OS=Homo sapiens GN=C1orf158 PE=2 SV=1  ali   18  24....................................................................TKVLTGNWMEERRKGLPYKHLITHHQEPPHRYL------ISTYDDHYNRH------------GYNPGLPPLRTWNGQKLLWLPEKSDFPLLAPPTNYGLYE............................................................. 106
2 -7.230sp|Q60I27|AL2CL_HUMAN ALS2 C-terminal-like protein OS=Homo sapiens GN=ALS2CL PE=1 SV=1  ali   17  1...........................................................................................................................................DTAALPPDPSSTCKRQLGVGAFPVESRWQGVYSPFDFVCAGCPRDLQEALLGF-------DVQSSRELRRSQDYLSCERTHPEDSV..... 80
3 -6.570sp|Q8IZS8|CA2D3_HUMAN Voltage-dependent calcium channel subunit alpha-2/delta-3 OS=Homo sapiens GN=CACNA2D3 PE=1 SV=1  ali   23  10....................................................................PLSVVKLWASAFGGEIKSI----------AAKYSGSQLLQKKYKEYEKDVAIEEIDGLQLVKKLAKNMEEMFHKKSEAVRRL................................................................................ 81
4 -6.520sp|Q9NY47|CA2D2_HUMAN Voltage-dependent calcium channel subunit alpha-2/delta-2 OS=Homo sapiens GN=CACNA2D2 PE=1 SV=1  ali   15  9....................................................................QQHTMQHWARRLEQEVDGV----------MRIFGGVQQLREIYKDNRNLFEVQENEPQKLVEKVAGDIESLLDRKVQALKRL................................................................................ 80
5 -6.390sp|Q7Z3S7|CA2D4_HUMAN Voltage-dependent calcium channel subunit alpha-2/delta-4 OS=Homo sapiens GN=CACNA2D4 PE=1 SV=2  ali   18  37....................................................................PLETVKLWADTFGGDLYNT----------VTKYSGSLLLQKKYKDVESSLKIEEVDGLELVRKFSEDMENMLRRKVEAVQNL................................................................................ 108
6 -5.960sp|P54289|CA2D1_HUMAN Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Homo sapiens GN=CACNA2D1 PE=1 SV=3  ali   13  6.....................................................................AVTIKSWVDKMQEDLVTL----------AKTASGVNQLVDIYEKYQDLYTVEPNNARQLVEIAARDIEKLLSNRSKALVRLALE............................................................................. 79
7 -5.950sp|Q9P2H0|K1377_HUMAN Uncharacterized protein KIAA1377 OS=Homo sapiens GN=KIAA1377 PE=1 SV=3  ali   13  64........................................................................................................................................RQDATLYCTQRSPVCEESYPSVTLRTAEEESVPLWK.......................................................... 99
8 -5.900sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2  ali   13  2....................................................................................................FNDFDVKETSHHLVISHLDLH-------ICDDIHAKEKESNRRITGGAMQLSFTQLTIDYYPYHKAGDS-WMYFSDATKTKNGWANELLHEFECNVE................................. 93
9 -5.450sp|Q8N9H9|CA127_HUMAN Uncharacterized protein C1orf127 OS=Homo sapiens GN=C1orf127 PE=2 SV=2  ali   12  39......................WLLSLRSLEDASLMGLYVDMNATTVTVQSPRQGLLQRWEVSGGQQALPGVSFQPESEVLVHIPKQRLLVKRGSYIEETLSLRFLRVHQSNIFM----TENKDFVVVSIPAAGVLQVQRCQEVGGTPGTQAFYRVDLSLEFAEMAAPVLWTVESFF..................................................... 196
10 -5.030tr|E9PI78|E9PI78_HUMAN Uncharacterized protein OS=Homo sapiens GN=MRPL49 PE=4 SV=1  ali   17  43........................................................................................................................................................................DEYQFVERLLPATRIPDPPKHEHYPTPSGWQPPRDPTLP-----PNWLRQLSVPDSPTWSLP 99
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 5 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.