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Query: d2itka2 d.26.1.1 (A:51-163) Mitotic rotamase PIN1, domain 2 {Human (Homo sapiens) [TaxId: 9606]}, from SCOP207

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110
# Score Template Links and tools%idFirst EPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTELast
1 -6.540sp|Q5T089|MORN1_HUMAN MORN repeat-containing protein 1 OS=Homo sapiens GN=MORN1 PE=2 SV=2  ali   14  28......................................................QLLQDHGEIAKSESGRVLAGVRYVQLSAYSEVNFFKVDRDNQETLIQTPFGFECI.... 85
2 -6.230sp|A6NCM1|IQCAL_HUMAN Putative IQ and AAA domain-containing protein 1-like OS=Homo sapiens GN=IQCA1P1 PE=5 SV=2  ali   13  1..............KEEEFRAAMVKAHDSLVETEGPDMKEKMKEQIRQWFIECHDLTGRFPDYPDASSGGSYSIF...................................... 61
3 -6.050sp|Q5T4D3|TMTC4_HUMAN Transmembrane and TPR repeat-containing protein 4 OS=Homo sapiens GN=TMTC4 PE=1 SV=2  ali   15  72....................................................................GSRLSSNTSHKSYRPLTVLTFRINYYLSGGF--HPVGFHVV.... 110
4 -5.100sp|Q86XH1|IQCA1_HUMAN IQ and AAA domain-containing protein 1 OS=Homo sapiens GN=IQCA1 PE=2 SV=1  ali   15  18...............................LIEGVDIKENLQDQIRHWFIECRNLTGTFPDYPDVEEGGS.......................................... 57
5 -4.910sp|Q99666|RGPD5_HUMAN RANBP2-like and GRIP domain-containing protein 5/6 OS=Homo sapiens GN=RGPD5 PE=1 SV=3  ali   10  10.....QSGHMLLSLSRGKQDFLKEVVETFANKIGQSALYDALFSSQSPKDTSFLGSDDIGKIDVQEPELEDL---------ARYDVGAIRAHNGSLQHLT............. 95
6 -4.910sp|O14715|RGPD8_HUMAN RANBP2-like and GRIP domain-containing protein 8 OS=Homo sapiens GN=RGPD8 PE=1 SV=2  ali   10  10.....QSGHMLLSLSRGKQDFLKEVVETFANKIGQSALYDALFSSQSPKDTSFLGSDDIGKIDVQEPELEDL---------ARYDVGAIRAHNGSLQHLT............. 95
7 -4.720sp|Q8N594|MPND_HUMAN MPN domain-containing protein OS=Homo sapiens GN=MPND PE=1 SV=1  ali   5.............................................LEPGAGVLSIYYLGKKFLGDLQPDGRIMWQETGQTFNSPSAWATHCK-KLVNPAKKSGCGWASVKYKG 71
8 -4.640sp|A2RRP1|NBAS_HUMAN Neuroblastoma-amplified sequence OS=Homo sapiens GN=NBAS PE=1 SV=2  ali   21  11....................................RIVDHLLASLQQGRWDAEELGRHLREAGHEAEAGSLLLAVRGQAFRTFSTALRAAQ..................... 68
9 -4.610sp|Q8N8X9|MB213_HUMAN Protein mab-21-like 3 OS=Homo sapiens GN=MAB21L3 PE=2 SV=2  ali   13  15..................NKVDLRRQQISQAVEEVQKVVHHLTTNISNQDIRFQAVPYSDT.................................................... 57
10 -4.600sp|P08048|ZFY_HUMAN Zinc finger Y-chromosomal protein OS=Homo sapiens GN=ZFY PE=1 SV=3  ali   20  2.................................................DEDEFELQPQEPNSFFDGIGADATHMDGDQIVVEIQEAVF------VSNIVDSDITVHNFVPDD 59

FFAS is supported by the NIH grant R01-GM087218-01
1 4 3 0 4 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang Y, Stec B, Godzik A. Between order and disorder in protein structures: analysis of "dual personality" fragments in proteins. Structure. 2007 Sep;15(9):1141-7.