current user: public |
|
Query: d3ldqb1 a.7.7.1 (B:151-260) BAG-family molecular chaperon regulator-1, BAG1 {Human (Homo sapiens) [TaxId: 9606]}, from SCOP207 |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 | |||||||
# | Score | Template | Links and tools | %id | First | NSPQEEVELKKLKHLEKSVEKIADQLEELNKELTGIQQGFLPKDLQAEALCKLDRRVKATIEQFMKILEEIDTLILPENFKDSRLKRKGLVKKVQAFLAECDTVEQNICQ | Last |
1 | -6.190 | sp|Q9NR09|BIRC6_HUMAN Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=2 | ali | 11 | 53 | .............SVGDGLFTILTTLSKKASTVHMMLQPILTYMACGYMGRQGSLATCQLSEPLLWFILRVDALKAFHDMGGVQLICNNMVTSTRAIVNTARSMVSTIMK | 153 |
2 | -5.770 | sp|Q8WXH0|SYNE2_HUMAN Nesprin-2 OS=Homo sapiens GN=SYNE2 PE=1 SV=3 | ali | 10 | 1 | ......................................................KTQIGMTESLLKALSPSDSLEIFTKLEEIQQQQKHSMILLENQIGCLTPELSELKK | 59 |
3 | -5.710 | sp|Q96JB1|DYH8_HUMAN Dynein heavy chain 8, axonemal OS=Homo sapiens GN=DNAH8 PE=1 SV=2 | ali | 10 | 58 | ...........................................................LANIFLPAVLATNNWGALNQSKQGESEKHIFTETINRYLSFLDGARISIE. | 107 |
4 | -5.670 | sp|O15357|SHIP2_HUMAN Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2 OS=Homo sapiens GN=INPPL1 PE=1 SV=2 | ali | 10 | 1 | ......................................................NGLSTVSHDYLKGSYGLDLEAVRGGASHLPHLTRTLATSCRRLHSEVDKVLSGLE. | 55 |
5 | -5.630 | sp|Q9H1K0|RBNS5_HUMAN Rabenosyn-5 OS=Homo sapiens GN=ZFYVE20 PE=1 SV=2 | ali | 12 | 17 | ...............................................EKLRLCMEKVDQKAPEYIRMAASLNAGETTYSLEHASDLRVEVQK----VYELIDALSKKI.. | 73 |
6 | -5.450 | sp|Q13905|RPGF1_HUMAN Rap guanine nucleotide exchange factor 1 OS=Homo sapiens GN=RAPGEF1 PE=1 SV=3 | ali | 9 | 18 | ...................KKVLEMLPGSASKVLEAILPLVQNDPRIQHSSALSSCYSRVYQSLANLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKEL...... | 102 |
7 | -5.440 | sp|Q7Z2Z1|TICRR_HUMAN Treslin OS=Homo sapiens GN=TICRR PE=1 SV=2 | ali | 10 | 3 | ................................................................LQVFLRLEMCLQCPSINESTDDMEQVVEEVTDLLRMV......... | 39 |
8 | -5.300 | sp|Q9H8E8|CSR2B_HUMAN Cysteine-rich protein 2-binding protein OS=Homo sapiens GN=CSRP2BP PE=1 SV=3 | ali | 23 | 10 | .................................................................LLLKRLEACAVAMTPEARRLKRKLIVRQAKR-LFDLDQVVNAA.. | 58 |
9 | -5.220 | sp|Q9Y679|AUP1_HUMAN Ancient ubiquitous protein 1 OS=Homo sapiens GN=AUP1 PE=1 SV=1 | ali | 8 | 16 | ...........................................................LRRFVVRTMCAVLGLVARQEDSGLRDHSVRVL--ISNHVTPFDHNIVNL.. | 62 |
10 | -5.190 | sp|Q9UL15|BAG5_HUMAN BAG family molecular chaperone regulator 5 OS=Homo sapiens GN=BAG5 PE=1 SV=1 | ali | 13 | 28 | ...........................................................FEEGIQDIILRLTHVKT-GGKISLRKARYHTLTKICAVQEIIED....... | 70 |
FFAS is supported by the NIH grant R01-GM087218-01
|
Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Ginalski K, Grishin NV, Godzik A., Rychlewski L. Practical lessons from protein structure prediction. Nucleic Acids Res. 2005 Apr 1;33(6):1874-91. |