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Query: d1kjqa1 b.84.2.1 (A:319-392) Glycinamide ribonucleotide transformylase PurT, C-domain {Escherichia coli [TaxId: 562]}, from SCOP207

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70
# Score Template Links and tools%idFirst GPAASAVILPQLTSQNVTFDNVQNAVGADLQIRLFGKPEIDGSRRLGVALATAESVVDAIERAKHAAGQVKVQGLast
1 -33.5001eyz_A mol:protein length:392 PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE 2  ali model follow..  100  320.PAASAVILPQLTSQNVTFDNVQNAVGADLQIRLFGKPEIDGSRRLGVALATAESVVDAIERAKHAAGQVKVQG 392
2 -31.5003ax6_A mol:protein length:380 Phosphoribosylaminoimidazole carboxylase, ATPase subunit  ali model follow..  22  297IPAVMVNLLGEEGYYGPALIGLEEALAEGLSLHFYGKKETRPYRKMGHFTVVDRDVERALEKALRAKKILKVVS 372
3 -30.3004e4t_A mol:protein length:419 Phosphoribosylaminoimidazole carboxylase, ATPase subunit  ali model follow..  28  333SPAAMLNILGDVWFPNGAAAG-TVAAMPAAHLHLYGKEEARVGRKMGHVNFTAEMRDDAVAAATACAQLLRVPL 412
4 -29.8003k5h_A mol:protein length:403 Phosphoribosyl-aminoimidazole carboxylase  ali model follow..  15  323QPSIMLNIIGGAAPDTHLQAAECALSIPNASIHLYSKGAAKPGRKMGHITVTAPTMHEAETHIQPLIDVVDR.. 394
5 -28.9004izo_A mol:protein length:419 Phosphoribosylaminoimidazole carboxylase, ATPase subunit  ali model follow..  22  333SPAAMLNVLGDVWFASGASGE-QVAAMPTARLHLYGKEEARVGRKMGHVNFTAATLDEAVAGATACARLLRIPL 412
6 -27.9003q2o_A mol:protein length:389 Phosphoribosylaminoimidazole carboxylase, ATPase subunit  ali model follow..  20  314KPVVMVNILGEHIEGVLR----QVNRLTGCYLHLYGKEEAKAQRKMGHVNILNDNIEVALEKAKSLHIWDHQE. 382
7 -27.9003orq_A mol:protein length:377 N5-Carboxyaminoimidazole ribonucleotide synthetase  ali model follow..  14  311KPAVMMNLLGKDLDLLEN----EFNEHPEWHLHIYGKSERKDSRKMGHMTVLTNDVNQTEQDMYAKFEGSN... 377
8 -27.6002czg_A mol:protein length:433 phosphoribosylglycinamide formyl transferase  ali model follow..  28  334.YRLFPMLIPAASGYSPRFRGLVKALSPNATVRLFGKPEAYVGRRLGIALAWDKDVEVAKRKAEMVAHMIELRT 415
9 -26.3001b6r_A mol:protein length:355 PROTEIN (N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE)  ali model follow..  278NPSVMINLIGSDVNYDW-------LKLPLVHLHWYDK-EVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEY 343
10 -25.9003aw8_A mol:protein length:369 Phosphoribosylaminoimidazole carboxylase, ATPase subunit  ali model follow..  11  298GQSAMVNLIGEKPPFAEVLK------VEGAHLHWYGK-AVRPGRKVGHITLRRDGLKALEEGLARLSRLVSELP 364
11 -24.4002z04_A mol:protein length:365 Phosphoribosylaminoimidazole carboxylase ATPase subunit  ali model follow..  16  291.PSGMVNILGKSYEEIPLKEILS---VEGAKLYWYGK-EKKPRRKVGHVNVVGRSKEEVVEKVERVFTLLK... 356
12 -21.8004ma0_A mol:protein length:373 Phosphoribosylaminoimidazole carboxylase, ATPase subunit  ali model follow..  11  299.KTVMLNCIGGMPATK------DLAALDRVKIHSYNK-EPRKGRKVGHLNLNLNDETDEYQLLQVKK....... 357

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10.