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current user: public |
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Query: d3etja1 b.84.2.1 (A:277-355) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), C-domain {Escherichia coli [TaxId: 562]}, from SCOP207 |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . | |||||||
# | Score | Template | Links and tools | %id | First | NNPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG | Last |
1 | -34.600 | 1b6r_A mol:protein length:355 PROTEIN (N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE) | ali model follow.. | 100 | 277 | NNPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG | 355 |
2 | -27.900 | 3aw8_A mol:protein length:369 Phosphoribosylaminoimidazole carboxylase, ATPase subunit | ali model follow.. | 41 | 297 | RGQSAMVNLIGEKPPAEVLKVEGAHLHWYGKAVRPGRKVGHITLRRDGLKALEEGLARLSRLVSELPWEG......... | 367 |
3 | -26.900 | 3ax6_A mol:protein length:380 Phosphoribosylaminoimidazole carboxylase, ATPase subunit | ali model follow.. | 31 | 297 | .IPAVMVNLLGEEGYEEALAIEGLSLHFYGKETRPYRKMGHFTVVDRDVERALEKALRAKKILKVVSEEGAMCQG.... | 380 |
4 | -26.100 | 2z04_A mol:protein length:365 Phosphoribosylaminoimidazole carboxylase ATPase subunit | ali model follow.. | 30 | 290 | .LPSGMVNILGKSYEEEILSVEGAKLYWYGKEKKPRRKVGHVNVVGRSKEEVVEKVERVFTLLKGSREK.......... | 361 |
5 | -25.900 | 3q2o_A mol:protein length:389 Phosphoribosylaminoimidazole carboxylase, ATPase subunit | ali model follow.. | 27 | 314 | .KPVVMVNILGEHIERQVNRLTGCYLHLYGKEAKAQRKMGHVNILNDNIEVALEKAKSLHIWDHQE............. | 382 |
6 | -25.500 | 4ma0_A mol:protein length:373 Phosphoribosylaminoimidazole carboxylase, ATPase subunit | ali model follow.. | 41 | 299 | ..KTVMLNCIGMPATKDLAALDRVKIHSYNKEPRKGRKVGHLNLNLNDETDEYQLLQVKK................... | 357 |
7 | -24.800 | 3orq_A mol:protein length:377 N5-Carboxyaminoimidazole ribonucleotide synthetase | ali model follow.. | 31 | 310 | LKPAVMMNLLGKDLDNEFNEHPEWHLHIYGKERKDSRKMGHMTVLTNDVNQTEQDMYAKFEGSN............... | 377 |
8 | -24.700 | 3k5h_A mol:protein length:403 Phosphoribosyl-aminoimidazole carboxylase | ali model follow.. | 31 | 322 | RQPSIMLNIIGGAAPDCALSIPNASIHLYSKAAKPGRKMGHITVTAPTMHEAETHIQPLIDVVD............... | 393 |
9 | -24.400 | 4e4t_A mol:protein length:419 Phosphoribosylaminoimidazole carboxylase, ATPase subunit | ali model follow.. | 33 | 332 | HSPAAMLNILGDVWFDTVAAMPAAHLHLYGKEARVGRKMGHVNFTAEMRDDAVAAATACAQLLRVPLD........... | 413 |
10 | -23.200 | 4izo_A mol:protein length:419 Phosphoribosylaminoimidazole carboxylase, ATPase subunit | ali model follow.. | 32 | 332 | HSPAAMLNVLGDVWFDQVAAMPTARLHLYGKEARVGRKMGHVNFTAATLDEAVAGATACARLLRIPLD........... | 413 |
11 | -22.500 | 2czg_A mol:protein length:433 phosphoribosylglycinamide formyl transferase | ali model follow.. | 18 | 332 | DGYRLFPMLIPAATHVKALSVPNATVRLFGKEAYVGRRLGIALAWDKDVEVAKRKAEMVAHMIELRTRSS......... | 418 |
12 | -20.900 | 1eyz_A mol:protein length:392 PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE 2 | ali model follow.. | 9 | 319 | .GPAASAVILPQLTSQNNAVGADLQIRLFGKEIDGSRRLGVALATAESVVDAIERAKHAAGQVKVQG............ | 392 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30. |