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current user: public |
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Query: d1asha_ a.1.1.2 (A:) Ascaris hemoglobin, domain 1 {Pig roundworm (Ascaris suum) [TaxId: 6253]}, from SCOP207 |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . | |||||||
# | Score | Template | Links and tools | %id | First | ANKTRELCMKSLEHAKVDTSNEARQDGIDLYKHMFENYPPLRKYFKSREEYTAEDVQNDPFFAKQGQKILLACHVLCATYDDRETFNAYTRELLDRHARDHVHMPPEVWTDFWKLFEEYLGKKTTLDEPTKQAWHEIGREFAKEINK | Last |
1 | -39.200 | PF00042.22; GLB8_CHITH/9-115; Globin | ali follow.. | 13 | 1 | ...QLALFKSSWNTVK--------HNEVDILYAVFKANPDIQAKFPQFAGKDLDSIKDSADFAVHSGRIVGFFSEVIGLIGNPEALKTLIDGLASSHKARGIEKAQF........................................ | 99 |
2 | -11.300 | PF11563.8; F0XJU9_GROCL/20-199; Protoglobin | ali follow.. | 10 | 15 | SSTDIDHLVAGAKYI----KVLIPAVTNIVYRKLLQ-YDITARAFTSFEGPLDAVPAEDSPQILHRKMFLRAYLARLCSDPSQMTFWEYLDKVGMMHVGLGRAHPSLIQDVLTEAVLSHPRLSMGRKMGLVKALGKVIWIQNDLFAK | 172 |
3 | -8.900 | PF08897.11; D5WYH9_THIK1/5-137; Domain of unknown function (DUF1841 topsan) | ali follow.. | 5 | 2 | KDEVRQFFLSAWQRHRAGGVLTPLE---LIAADWMELHPEYHAELTDPQSANRDYAVEQGRTNPFLHLSMHLTIAEQVSIDQPPGIRQAFELLRSKRGEHEAH--HAIMECLGEMLWTAQRSGLPPDGA.................. | 125 |
4 | -7.700 | PF17784.1; G9N3W9_HYPVG/16-220; Sulfotransferase domain | ali follow.. | 8 | 54 | ........LQLLKELTEGFVVTSDIPFFSFVPELCELYPDAQVVYV----KRDPKTWWRSMGAVASNAQTKFLSMLFWPVPGWRWSIGTATLAFFRTQRVYTDNDLESMERHMQSVIDSVPKDRLHIVRLEDGWAPLCKILDCPIPN | 188 |
5 | -6.360 | PF17938.1; A0A0F2RSS2_9RHOB/90-208; Tetracyclin repressor-like, C-terminal domain | ali follow.. | 8 | 9 | ...........................VEFTYDFFDSNPLFVKILRNENLLEGRFIVETEVVRISSQPLIDAISRIIARGLAQGVFRH---GYDALQIYITIVALSAHHLNNGHTLTAIFGVDLLSPEWRSKRRAHAVSLV...... | 119 |
6 | -6.350 | PF08362.11; RUTR_ECOLI/70-212; YcdC-like protein, C-terminal region | ali follow.. | 14 | 2 | .RQILDIWLAPLKAFREDFAPAAIKEYIRLKLEVSRDYPQASRLFCM------EMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIR. | 141 |
7 | -6.070 | PF15929.5; J9JQP8_ACYPI/1-150; Myofilin | ali follow.. | 8 | 1 | ......MLKQHFDMIGRNEPIQRKANSGQSYVRALKGSDDMRA-----PEITHYHTPGRGVFRPILSADYPTWPSYKSIYDDPKHPSDRINTPGYRYLPYGISPRNIYPHNYHSDRYPSYDHYHSEPYKALQDWTDHLDRMAEL... | 138 |
8 | -5.960 | PF14920.6; F7G3Z3_ORNAN/259-510; MDM2-binding | ali follow.. | 4 | 207 | ........................................................EDHECFSACSQRLFEISKFYLKDLKTSRGLLEEMKKTANNNVKQVI............................................. | 252 |
9 | -5.610 | PF05823.12; Q9XUB7_CAEEL/32-181; Nematode fatty acid retinoid binding protein (Gp-FAR-1) | ali follow.. | 11 | 1 | .AEFKELIPAKVTEYLKSITTEEKAAIKEFIKSVMGGNKSVEELSADIK-------ERSPSLYAKVEKLDVLLRTKLAKLDAALALFGKVIAQGLSFRQQFHAGYQPTPEMVKKLFKGYIAEYKTLSENAKATITDEFPIVVEFFQH | 140 |
10 | -5.520 | PF11075.8; Q089B5_SHEFN/10-184; Protein of unknown function VcgC/VcgE (DUF2780 topsan) | ali follow.. | 9 | 46 | TEQSSALVGDVMSQLGLSQTQAEGGLGSLLFSQLSDSIPNADGLLAAVPALSSDSGMSG---------LLSQAGNLGSALQGSAMVYDAFEKLG---------ISKEYITPMVDIAKNYLQQSGG...................... | 163 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Alonso A, Rahmouni S, Williams S, van Stipdonk M, Jaroszewski L, Godzik A, Abraham RT, Schoenberger SP, Mustelin T. Tyrosine phosphorylation of VHR phosphatase by ZAP-70. Nat Immunol. 2003 Jan;4(1):44-8. Epub 2002 Nov 25. |