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Query: d2bkma_ a.1.1.1 (A:) automated matches {Geobacillus stearothermophilus [TaxId: 1422]}, from SCOP207

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .
# Score Template Links and tools%idFirst EQWQTLYEAIGGEETVAKLVEAFYRRVAAHPDLRPIFPDDLTETAHKQKQFLTQYLGGPPLYTAEHGHPMLRARHLRFEITPKRAEAWLACMRAAMDEIGLSGPAREQFYHRLVLTAHHMVNTPDHLDLast
1 -63.700PF01152.21; Q7CX73_AGRFC/7-127; Bacterial-like globin  ali follow..  43  1....TLYEAIGGDATVRALTRRFYELMDTLPEAARCRAADLSGSEAKFYDYLTGYLGGPPVYVEKHGHPMLRRRHFVAPIGPAERDEWLLCFRRAMDETIENAKLREIIWAPVERLAFHMQN...... 121
2 -10.300PF11563.8; F0XJU9_GROCL/20-199; Protoglobin  ali follow..  12  30............KVLIPAVTNIVYRKLLQYDITARAFSPQILHRKMFLRAYLARLCSDPSQMTFWEYLDKVGMMHVGLGRAHPHIGATLSLIQDVLTEARLSMGRKMGLVKALGKV............ 162
3 -7.330PF02211.15; Q2K6I5_RHIEC/1-218; Nitrile hydratase beta subunit  ali follow..  10  7.........LGGQMGFGPVAPEKDEPCFHADWEKRALG-------------ITLSCGAFGAWTIDESRHARENIPPADYLAASYYEIWIRGVETLLARHGF---TREELLSGHKLQDGAAPKRVLKAE 110
4 -6.520PF03981.12; Q7QJX5_ANOGA/117-262; Ubiquinol-cytochrome C chaperone  ali follow..  12  38...........GRFMRNCIVETMWNDV--TTRAKQLTMDNPSAVRPQIQQLSEQFQAALISYDE--------------GISYDDKALAAALWRRFLGGRCDDYEKLELLVGYVRKQVSMLDQLSRYD. 137
5 -6.170PF02444.16; ORF3_HEVCH/1-114; Hepatitis E virus ORF-2 (Putative capsid protein)  ali follow..  16  26RPVSRLAAAVGGAAAVPAVVSGVTGLILSPSQSPIFIQPTPSPPMSPLRPGLDLVFANPPDHSAPLGVTRPSAPPLPHVVD............................................... 106
6 -6.140PF05861.12; Q882R4_PSESM/1-352; Bacterial phosphonate metabolism protein (PhnI)  ali follow..  12  1.....MYVAVGGEQAIDNAHRLLANKRRGDTDIAEL---DVEQIRQQLPLAVARVMSEGSLYDPQLAALAIKQSA-----DLVEAIFLLRAYRTTLTRFCASVPIDTSNMQLDRRLSATFKDVPGGQ. 116
7 -5.940PF14381.6; K4BU86_SOLLC/288-498; Ethylene-responsive protein kinase Le-CTR1  ali follow..  10  3QTVSYRLWVSGSLSYADKISDGFYNILGMNPYLWVMCNATEDGKQIPSLMALKG--------------IEPSETSMEVVLIDRRGDSMLRELEDKAQEIYFAAENTLVLAENLGKLVAVYMGGSFPVE 116
8 -5.890PF11251.8; C7PJT1_CHIPD/18-247; Protein of unknown function (DUF3050 topsan)  ali follow..  11  3..QHPLYPEMQRMDDIRAFMQYHVFAVWDFMSLLKSLQRNLTATRFLINEIVTGEESDVAPDGTRLSHFELLQAMEQVGADTSGIKECLQQLERGKSLTAVINGLPPAVRGFVKHTFDLIANEP.... 137
9 -5.750PF14028.6; C7QBX6_CATAD/12-341; Lantibiotic biosynthesis dehydratase C-term  ali follow..  15  6.....VFYASSTRPLLTECVRPMVDGLVADGLVSGYF-------------FINYWLEGP---------------HLRLRLSMAAVDPVRRRASAAIEDFLRTRPALFEVKDGFFGELYATLFELEYTP 103
10 -5.690PF17928.1; A0A117RCQ2_9ACTN/93-205; Tetracyclin repressor-like, C-terminal domain  ali follow..  14  4............EEAVGSAVDRFMAFNTEHPVFFALMPGRIADAHDQLHTTLIGRIEDLLASLLPRSSPADITRTAHVCLGVYKAGLELVLAHEGAERTAYVQEVKNVLTRYLQPLA........... 113

FFAS is supported by the NIH grant R01-GM087218-01
1 3 6 8 0 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Jaroszewski L, Godzik A. Domain analysis of the tubulin cofactor system: a model for tubulin folding and dimerization. BMC Bioinformatics. 2003 Oct 10;4(1):46.