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Query: d2mnta_ d.26.1.0 (A:) automated matches {Trypanosoma brucei [TaxId: 999953]}, from SCOP207

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120
# Score Template Links and tools%idFirst PTERHFYHVLVKHKDVRRPSSLAPRNKGEKITRSRADAINLAQAILAQHKERKTWSLDEFVQVVRDFSECGSAKRDGDLGMVESGTYTEGFDTVAFSLKSGEVSAPVETELGVHLIYRVELast
1 -62.700PF13616.6; A6H2B0_FLAPJ/336-455; PPIC-type PPIASE domain  ali follow..  23  12NANAKASHILISYEGTQVPNKKEKRTKEQ------------AKAKAVSLLAQVLANPSAFQMLAYTNSDDSSSQQGGDLGYFSQGQMVKPFNNFVFSNPVGKIG-LVETDFGFHIINVTD 118
2 -51.700PF00639.21; A3U4W5_CROAH/236-330; PPIC-type PPIASE domain  ali follow..  29  1.......HIMVSPKPKDTVF---------------------NPKDRIEELYLKVKQGEDFGVLAKQFSDDRSARREGKLDRFGSGKLNSEFEKKAFSLKAGQVTEPFETQYGWHIIKLID 95
3 -43.400PF13145.6; F8BSA4_OLICO/251-370; PPIC-type PPIASE domain  ali follow..  17  2............SDEDARKVYDSRRDEYATPAKREVLQIAFPSEDAAKTAREKIAGGTSFEDLAKEMKLTPG---DINLGLTSEASLGPTIAKAAFALPLNEVSQPVKGALATVLLKITK 107
4 -6.630PF00703.21; A7M4A9_BACO1/231-337; Glycosyl hydrolases family 2  ali follow..  1...VHLEDIQVYPDLSNQKALVRMNIRSASSTKGEITLSAASFNTDIQHKVAPVHQSFNIRPGDNPVEMELPMGKEFLT-----DEFSPALYKLTAKLTNGKQTDTQQVQFGMR...... 107
5 -6.580PF09566.10; F4KPK0_HALH1/1-281; SacI restriction endonuclease  ali follow..  10  183.............................................................VAHKVNQSGASSKEVGDIDVYKDDNFYYAIEVKDKNFTSYDLEHAFKK........... 230
6 -6.250PF00254.28; A0A0N4TXG0_BRUPA/14-105; FKBP-type peptidyl-prolyl cis-trans isomerase  ali follow..  15  1....................................QTFPKTGQTVTCHYVLTLENGEEV---------DSSRSRGKPFKFIGAGEVIKGWDEGVAKMSVGQRAKLVSSDLGY....... 70
7 -6.010PF17395.2; A0A0H5CNC9_9PSEU/1-93; Family of unknown function (DUF5403 topsan)  ali follow..  19  66...........................................................................................DDGAVAAEFGHISESGRAVPGINVLK... 91
8 -5.970PF04226.13; Q5LMN5_RUEPO/35-83; Transglycosylase associated protein  ali follow..  21  4............................................................................GIVGAFLAGTI---FPALGFAVGGGFLASVIHATIGSVIL.... 40
9 -5.810PF09210.11; K8GJE3_9CYAN/427-526; Domain of unknown function (DUF1957 topsan)  ali follow..  11  4......................................................KATERMIELSKREPADELETR---LNQAARELLLAQSSDWAFIMRTGTMVPYAVRRTRSHL..... 62
10 -5.710PF18050.1; D5QDI5_KOMHA/5-113; Cyclophilin-like family  ali follow..  18  45............................................................RHLSSDKAPKGYAPSAGDIAYYAPWGNIAIFYRNF--IKLGQIEDNLEG........... 97

FFAS is supported by the NIH grant R01-GM087218-01
1 4 0 5 8 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24