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Query: d3g46a_ a.1.1.2 (A:) Hemoglobin I {Ark clam (Scapharca inaequivalvis) [TaxId: 6561]}, from SCOP207

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .
# Score Template Links and tools%idFirst PSVYDAAAQLTADVKKDLRDSWKVIGSDKKGNGVALMTTLFADNQETIGYFKRLGDVSQGMANDKLRGHSITLMYALQNFIDQLDNPDDLVCVVEKFAVNHITRKISAAEFGKINGPIKKVLASKNFGDKYANAWAKLVAVVQAALLast
1 -39.400PF00042.22; GLB8_CHITH/9-115; Globin  ali follow..  16  1.............QLALFKSSWNTVKHN----EVDILYAVFKANPDIQAKFPQFAGKDSIKDSADFAVHSGRIVGFFSEVIGLIGNPENLKTLIDGLASSHKARGIEKAQFEEFRASLV........................... 107
2 -12.800PF11563.8; F0XJU9_GROCL/20-199; Protoglobin  ali follow..  10  12.......LDFSSTDIDHLVAGAKYIKVLIPAVTNIVYRKLLQ-YDITARAFETRSTSFEGPLDAVPAEDSPQILHRKMFLRAYLARLMTFWEYLDKVGMMHVGLGRAHPLHSLIQDVLTEAVLSHPRLSGLVKALGKVIWIQNDLF 170
3 -8.620PF01152.21; Q7CX73_AGRFC/7-127; Bacterial-like globin  ali follow..  9.........................DATVRALTRRFYELM-DTLPEAARCRA--------IHPADLSGSEAKFYDYLTGYLGGPPVYVE-----PMLRRRHFVAPIGPAERDEWLLCFRRAMDETIENAKLREIIWAPVERLAFHM 119
4 -7.830PF04876.12; NCP_RSVT/5-177; Tenuivirus major non-capsid protein  ali follow..  15  24PETVSDNITLTEDTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSF-----LSHLLGGEDDDNALIDIGLFFNMLQPSLGG------WITKNFLRHPNRMSKDQIKMLLDQIIKMAKAESSDTEEYEKVWKKMPTYFESII 167
5 -7.460PF08897.11; D5WYH9_THIK1/5-137; Domain of unknown function (DUF1841 topsan)  ali follow..  2..........KDEVRQFFLSAWQRHRAGGVLTPLEIAADWMELHPEYHAELTDPQSANRDYAVEQGRTNPFLHLSMHLTIAEQVDQPPGIRQAFELLRSKRGEHEAHHAIMECLGEMLWTAQRSGL.................... 120
6 -6.450PF00502.19; APCD_SYNP2/6-160; Phycobilisome protein  ali follow..  13.........PSSGELSGIKRIAEALADNEKKIVDQAQKQLFSIHPEYRT---SGGNAATTKQYNQCLRDYGWYLRLVTYGILAGDKDPIERIGLIGVKEMYNALGVPVPGMVDAIRCLKDAAL-GVLDSEEARIAAPYFDFITQAM 155
7 -6.270PF06744.12; Q88IA8_PSEPK/1017-1212; Type VI secretion protein IcmF C-terminal  ali follow..  10  28......AQQIAKPWEQVMAHRYPIAGSSRNEASVKDLQRFVDPDSGLLPAFKRNEIGNLAGGEGLGVGDGKGPALVNPGMLNSIDKASSVGQVIASLSDRDNGFEIMLEPSANFTDIVFTL......................... 142
8 -6.220PF17784.1; G9N3W9_HYPVG/16-220; Sulfotransferase domain  ali follow..  50..........RHDVLQLLKELTEGFVVTSDIPFFSFVPELCELYPDAQVVYVKRDPKTWWRSMGAVASNAQTKFLSMLFWPVPGWRWSIGTATLAFFRTQRVYTDNDLESMERHMQSVIDSVPKDRL--RLEDGWAPLCKILDCPI 186
9 -6.180PF16727.5; A0A194XQL3_9HELO/1150-1239; DNA repair protein REV1 C-terminal domain  ali follow..  1................................................................ELRDTLSAWHSEFVDDGPHPDDVAAMERYLRRVILDERDM----SKVVNVVRWLAWLIDESDQDNEGTRIWSEALEGIKFKV 78
10 -6.080PF05044.12; PROX1_CHICK/578-731; Homeo-prospero domain  ali follow..  1........GLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEESITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKL 139

FFAS is supported by the NIH grant R01-GM087218-01
1 3 6 9 2 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Shiryaev SA, Ratnikov BI, Chekanov AV, Sikora S, Rozanov DV, Godzik A,Wang J, Smith JW, Huang Z, Lindberg I, Samuel MA, Diamond MS, Strongin AY. Cleavage targets and the D-arginine-based inhibitors of the West Nile virus NS3 processing proteinase. Biochem J. 2006 Jan 15;393(Pt 2):503-11.