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current user: public |
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| Query: d3g46a_ a.1.1.2 (A:) Hemoglobin I {Ark clam (Scapharca inaequivalvis) [TaxId: 6561]}, from SCOP207 |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . | |||||||
| # | Score | Template | Links and tools | %id | First | PSVYDAAAQLTADVKKDLRDSWKVIGSDKKGNGVALMTTLFADNQETIGYFKRLGDVSQGMANDKLRGHSITLMYALQNFIDQLDNPDDLVCVVEKFAVNHITRKISAAEFGKINGPIKKVLASKNFGDKYANAWAKLVAVVQAAL | Last |
| 1 | -39.400 | PF00042.22; GLB8_CHITH/9-115; Globin | ali follow.. | 16 | 1 | .............QLALFKSSWNTVKHN----EVDILYAVFKANPDIQAKFPQFAGKDSIKDSADFAVHSGRIVGFFSEVIGLIGNPENLKTLIDGLASSHKARGIEKAQFEEFRASLV........................... | 107 |
| 2 | -12.800 | PF11563.8; F0XJU9_GROCL/20-199; Protoglobin | ali follow.. | 10 | 12 | .......LDFSSTDIDHLVAGAKYIKVLIPAVTNIVYRKLLQ-YDITARAFETRSTSFEGPLDAVPAEDSPQILHRKMFLRAYLARLMTFWEYLDKVGMMHVGLGRAHPLHSLIQDVLTEAVLSHPRLSGLVKALGKVIWIQNDLF | 170 |
| 3 | -8.620 | PF01152.21; Q7CX73_AGRFC/7-127; Bacterial-like globin | ali follow.. | 9 | 9 | .........................DATVRALTRRFYELM-DTLPEAARCRA--------IHPADLSGSEAKFYDYLTGYLGGPPVYVE-----PMLRRRHFVAPIGPAERDEWLLCFRRAMDETIENAKLREIIWAPVERLAFHM | 119 |
| 4 | -7.830 | PF04876.12; NCP_RSVT/5-177; Tenuivirus major non-capsid protein | ali follow.. | 15 | 24 | PETVSDNITLTEDTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSF-----LSHLLGGEDDDNALIDIGLFFNMLQPSLGG------WITKNFLRHPNRMSKDQIKMLLDQIIKMAKAESSDTEEYEKVWKKMPTYFESII | 167 |
| 5 | -7.460 | PF08897.11; D5WYH9_THIK1/5-137; Domain of unknown function (DUF1841 topsan) | ali follow.. | 9 | 2 | ..........KDEVRQFFLSAWQRHRAGGVLTPLEIAADWMELHPEYHAELTDPQSANRDYAVEQGRTNPFLHLSMHLTIAEQVDQPPGIRQAFELLRSKRGEHEAHHAIMECLGEMLWTAQRSGL.................... | 120 |
| 6 | -6.450 | PF00502.19; APCD_SYNP2/6-160; Phycobilisome protein | ali follow.. | 8 | 13 | .........PSSGELSGIKRIAEALADNEKKIVDQAQKQLFSIHPEYRT---SGGNAATTKQYNQCLRDYGWYLRLVTYGILAGDKDPIERIGLIGVKEMYNALGVPVPGMVDAIRCLKDAAL-GVLDSEEARIAAPYFDFITQAM | 155 |
| 7 | -6.270 | PF06744.12; Q88IA8_PSEPK/1017-1212; Type VI secretion protein IcmF C-terminal | ali follow.. | 10 | 28 | ......AQQIAKPWEQVMAHRYPIAGSSRNEASVKDLQRFVDPDSGLLPAFKRNEIGNLAGGEGLGVGDGKGPALVNPGMLNSIDKASSVGQVIASLSDRDNGFEIMLEPSANFTDIVFTL......................... | 142 |
| 8 | -6.220 | PF17784.1; G9N3W9_HYPVG/16-220; Sulfotransferase domain | ali follow.. | 6 | 50 | ..........RHDVLQLLKELTEGFVVTSDIPFFSFVPELCELYPDAQVVYVKRDPKTWWRSMGAVASNAQTKFLSMLFWPVPGWRWSIGTATLAFFRTQRVYTDNDLESMERHMQSVIDSVPKDRL--RLEDGWAPLCKILDCPI | 186 |
| 9 | -6.180 | PF16727.5; A0A194XQL3_9HELO/1150-1239; DNA repair protein REV1 C-terminal domain | ali follow.. | 5 | 1 | ................................................................ELRDTLSAWHSEFVDDGPHPDDVAAMERYLRRVILDERDM----SKVVNVVRWLAWLIDESDQDNEGTRIWSEALEGIKFKV | 78 |
| 10 | -6.080 | PF05044.12; PROX1_CHICK/578-731; Homeo-prospero domain | ali follow.. | 7 | 1 | ........GLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEESITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKL | 139 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Zmasek CM, Zhang Q, Ye Y, Godzik A. Surprising complexity of the ancestral apoptosis network. Genome Biol. 2007 Oct 24;8(10):R226 [Epub ahead of print] |