| | | | | | . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 |
# |
Score |
Template |
Links and tools | %id | First |
ATHKPINILEAFAAAPPPLDYVLPNMVAGTVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHRLHALGAHLSAEERQAVADGLLIQPLIGSLPNIMAPEWFDGLKRAAEGRRLMVLDTLRRFHIEEENASGPMAQVIGRMEAIAADTGCSIVFLHHASKGAAMMGAGDQQQASRGSSVLVDNIRWQSYLSSMTSAEAEEWGVDDDQRRFFVRFGVSKANYGAPFADRWFRRHDGGVLKPAVLERQRKSKGVP | Last |
1 | -95.500 | d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]} |
ali model 3D-neighbors |
100 | 1 | ATHKPINILEAFAAAPPPLDYVLPNMVAGTVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHRLHALGAHLSAEERQAVADGLLIQPLIGSLPNIMAPEWFDGLKRAAEGRRLMVLDTLRRFHIEEENASGPMAQVIGRMEAIAADTGCSIVFLHHASKGAAMMGAGDQQQASRGSSVLVDNIRWQSYLSSMTSAEAEEWGVDDDQRRFFVRFGVSKANYGAPFADRWFRRHDGGVLKPAVLERQRKSKGVP |
274 |
2 | -27.600 | d1cr1a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]} |
ali model 3D-neighbors follow.. |
13 | 23 | ................TGINDKTLGARGGEVIMVTSGSGMGKSTFVRQQALQWGT---------AMGKKVGLAMLEESVEETAEDLIGLHNRVRLRQSDSLNDTFHLYDSFAEAETDRLLAKLAYMRSGL-GCDVIILDHISIVVSAESDERKMIDNLMTKLKGFAKSTGVVLVVICHLKNPDKGKAHEESITDLRGSGALRQLSDTIIALERNQQGDMPNL----------VLVRILKCRF................................ |
253 |
3 | -26.300 | d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} |
ali model 3D-neighbors follow.. |
12 | 14 | ...................KLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGG----EGKAMYIDTEGTFRP--ERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVE--SRYALLIVDSATALYRTDYSGRGELARFLRMLLRLADEFGVAVVITNQVVADGAAMFAADPKKPIGG-NIIAHASTTRLYLRKGRGET--------------RICKIYDSPCLPEAE-AMFAINADGVGDAKD........... |
242 |
4 | -21.100 | d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus elongatus PCC 7942 [TaxId: 1140]} |
ali model 3D-neighbors follow.. |
12 | 17 | ...................EMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKE----------RAILFAYEESRAQLLRNAYSWGMDF-----EEMERQNLLKIVCAYPESAGLEDHLQIIKSEINKPARIAIDSLSALARGVSNN--AFRQFVIGVTGYAKQEEITGLFT--------NTSDQFMGAHSITDSHISTITDTIILLQYVEIRG-----------EMSRAINVFKMRGSWHDKAIRFMISDKGPIKDSFRNFERIISGSP |
239 |
5 | -19.900 | d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus elongatus PCC 7942 [TaxId: 1140]} |
ali model 3D-neighbors follow.. |
13 | 6 | .........AKMRTMIEGFDDISHGLPIGRSTLVSGTSGTGKTLFSIQFLYNGII---------EFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEVVGGFDLSALIERINYAIQRARRVSIDSVTSVFQQYDASS-VVRRELFRLVARLKQIGATTVMT---------TERIEEYGPIARYGVEEFVSDNVVILRNVLEGE-----------RRRRTLEILKLRGTSHMKGEYFTITDHGI................ |
231 |
6 | -18.400 | d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]} |
ali model 3D-neighbors follow.. |
13 | 49 | .......................GGLPMGRIVEIYGPESSGKTTLTLQVIAAAQR----------EGKTCAFIDAEHALD------PIYARKLGVDIDNLL------------SQPDTGEQALEICDALARSGAVIVVDSVAALTPKAEIEARMMSQAMRKLAGNLKQSNTLLIFINQIRMK--IGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGE-----NVVGSETRVKVVKNKIAAPFKQAEFQ...................... |
256 |
7 | -14.500 | d2vhja_ c.37.1.11 (A:) automated matches {Pseudomonas phage [TaxId: 161736]} |
ali model 3D-neighbors follow.. |
13 | 122 | ...........................ASGMVIVTGKGNSGKTPLVHALGEALG-----------GKDKYATVRFGEPLSGYNTD---------------------------------FNVFVDDIARAMLQHRVIVIDSLKNVIGAAGGNTTSAFDLLSDIGAMAASRGCVVIASLNPTSNDDKIVEKEASRANSTSLVISTDVDGEWQVLTRTGEGLQRLTQTSYGEHSVLTIHTSK................................... |
300 |
8 | -11.600 | d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} |
ali model 3D-neighbors follow.. |
14 | 5 | ................................FLTGPPGVGKTTLIHKASEVLSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLSRVGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELFSQLFIQAVRQTLSTVEEIRNRKDVKVFNVTKENRNHLLPDIVTCVQSSR.............................................................................. |
188 |
9 | -11.300 | d2d2ea_ c.37.1.0 (A:) automated matches {Thermus thermophilus HB8 [TaxId: 300852]} |
ali model 3D-neighbors follow.. |
15 | 24 | ........................VVPKGEVHALMGPNGAGKSTL-----GKILAGDPEY---TVERGEILLILELSPDERARKGLFLAFQYPVEVPGVTIANFLRLALQAKLGREVGVAEFNEILQLLVLEPTYAVLDETDS--GLDIDALKVVARGVNAMR----GPNFGALVITHYQRILNYIQPDKVHVMMDGRVVATGGPELALELEAK............................................................ |
236 |
10 | -10.900 | d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} |
ali model 3D-neighbors follow.. |
12 | 3 | ..............................QVAIYGKGGIGKSTTTQNLTSGLHA----------MGKTIMVVGCDPKADSTRLAQKSVLDTLREEGEDVELDSILKEGYGGGRGIITSINMLEQLGAYTDDLDYVFYDVLGDVASGEMMALYAANNISKGIQKYAKSGGVRLGGIICNSRKVANEYELLDAFAKELGSQLIHFVPRSPMVTKAEINKQTVIEYDPTCEQAEEYRELARK.................................. |
243 |
11 | -10.700 | d1yksa1 c.37.1.14 (A:187-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]} |
ali model 3D-neighbors follow.. |
9 | 2 | .........................LKKGMTTVLDFHPGAGKTRRFLPQILAECAR---------RRLRTLVLA---PTRVVLSEMKEAFHGLDVKFHTQAFSAHGSGREVIDAMCHATLTYRMLEPTRVVNWEVIIMDEA-------HFLDPASIAARGWAAHRARANESATILMTAT............................................................................................... |
136 |
12 | -10.700 | d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} |
ali model 3D-neighbors follow.. |
14 | 1 | ..........................MTTRMIILNGGSSAGKSGIVRCLQSVL-------------PEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGGVS--------IGPEFRALEGAWAEGVVAMARAGARIIIDDVF-----------GGAAAQERWRSFVGDLDVLWVGVR-AEGRETARGDRVAGMAAKQAYVVHEGVEYDVEVDTTHKESIECAW................................................... |
170 |
13 | -10.600 | d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]} |
ali model 3D-neighbors follow.. |
9 | 1 | ..............................MILVTGGARSGKSRHAEALI--------------GDAPQVLYIASQILDDEMAARIQHHKDGRPAHWRTA-----------------CWRHLDTLITADLAPDDAILLECITTMVTNAAMERAIDDEIQILIAACQRCPAKVVLVTNEVGMGIVPENRARHFRDIAGNQRLAAAADEVWLV............................................................... |
171 |
14 | -10.600 | d1ihua2 c.37.1.10 (A:308-583) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} |
ali model 3D-neighbors follow.. |
15 | 4 | ..............DIPSLSALVDDINEHGLIMLMGKGGVGKTTMAAAIAVRLAD----------MGFDVHLTTSDDPHEETERYRQHVLETKGKELDEAGKRLLEEDLRSPCTEEIAVFQAFSRVIRE-AGKRFVVMDTAPTGHTLL-DATGAYHREIAKKMGEKGHFTTPMMLLQDPERTKVLLVTLPETTPVLEAANLQADLE.................................................................... |
208 |
15 | -10.500 | g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Pyrococcus furiosus [TaxId: 2261]} |
ali 3D-neighbors follow.. |
10 | 2 | .KLERVTVKNFRSHSDTVVEF------KEGINLIIGQNGSGKSSLLDAILVGLIKKDEFTKVGARDTYIDLIFEKDGTKYRITRRFLKGYSSGEIHAMKRLVGNEW-FLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYL-----DEERRRKLITIMERYLKKIP-QVILVSH-------------------DEELKDAADHVIRISLENGSSKVEV.................................................... |
291 |
16 | -10.200 | d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]} |
ali model 3D-neighbors follow.. |
10 | 121 | .....................AVFEGLVNRRRILNLPTSAGRSLIQALLARYYLE---------NYEGKILIIVTTQMADDFVDMIKKIGGGASKDDKYKNDAPVVVGTW---------QTVVKQPKEWFSQFGMMMNDECHLATG-------------KSISSIISGLNNCMFKFGLSGSLRDGKANIMQYVGMFGE............................................................................ |
278 |
17 | -10.100 | d3tuic1 c.37.1.12 (C:1-240) automated matches {Escherichia coli K-12 [TaxId: 83333]} |
ali model 3D-neighbors follow.. |
13 | 27 | ........................HVPAGQIYGVIGASGAGKSTLIRCVN----------LLERPTEGSVLVDGQESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGNPKVLLCDQATSAL-----DPATTRSILELLKDINRRLGLTILLITH................................................................................................ |
199 |
18 | -9.880 | d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} |
ali model 3D-neighbors follow.. |
11 | 4 | ................................IITGEPGVGKTTLVKKIVERLAIGFWTEEVRDPETKKRTGFRIITTEGK-----KKIFSSKFFTSKKLVGSYGVNVQYFEELAIPILERAYREAKK--DRRKVIIIDEIGKMELFSKKFRDLVRQIMHDVKEIRRLPGAVLIELTPENRDVILE........................................................................................ |
170 |
19 | -9.800 | d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]} |
ali model 3D-neighbors follow.. |
17 | 22 | ..........................MGRDYCVLLGPTGAGKSVFLELIA----------GIVKPDRGEVRLNGADITPLPPERRLRNVERVERDRRVREMAEKLGIAHLLDRKPARLSRQRVALARALVIQPRLLLLDPLSAV------DLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAMLAD...................................................................................... |
195 |
20 | -9.620 | d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} |
ali model 3D-neighbors follow.. |
13 | 44 | ................................LLEGPPHSGKTAL----AAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKS---------------------------------------QLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAGRKLLIIGTTSRKDVLQ-----------EMEMLNAFSTTIHVPNIATGE........................................................ |
178 |
21 | -9.570 | d3ea0a1 c.37.1.0 (A:1-239) automated matches {Chlorobium tepidum [TaxId: 194439]} |
ali model 3D-neighbors follow.. |
15 | 4 | ..............................FGFVSAKGGDGGSCIAANFAFALSQEPDAVDISLPFGDLDMYLSGNTHSQDLADRLDKSLLDTMVQHISPSLDLIPSPATFEKIVNIEPERVSDLIHIAASFYDYIIVDFLCIVTTPSLQSLRRAGQLLKLCKEFEKPISRIEIILNRADTNSRITSDE..................................................................................... |
189 |
22 | -9.510 | d3l0ob2 c.37.1.0 (B:137-420) automated matches {Thermotoga maritima [TaxId: 2336]} |
ali model 3D-neighbors follow.. |
14 | 29 | .....................LIDLFAPGQRGMIVAPPKAGKTTILKEIANGIAENHP-----------IILLIDE--------RPEEVTDIRESTNAIVIAAPFDMPPDKQVKVAELTLEMAKRLVEFNYDV-VILLDSLTRLARVYNIVVPPSGKFFGAARNTREGGSLTIIATALVETGSKMDEV---------FEEFKGTGNMELVLSRQLANKRIFPAIN................................................. |
227 |
23 | -9.460 | d1sgwa1 c.37.1.12 (A:2-200) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]} |
ali model 3D-neighbors follow.. |
12 | 22 | ........................TIEKGNVVNFHGPNGIGKTTLLKTISLKPLKGEIIYGVPITKVKGKIFFLPEEII-KAVASLYGVKVNKNEIMDALESVEVLDLKKKLGELSQGTIRRVQLASTLLVNAEIYVLDPVVAI------DEDSKHKVLKSILEILKEKGIVIISSREELS............................................................................................. |
186 |
24 | -9.440 | d4p32a_ c.37.1.0 (A:) automated matches {Escherichia coli K-12 [TaxId: 83333]} |
ali model 3D-neighbors follow.. |
15 | 24 | ........................TVNSGEIVGLLGPNGAGKTTTFYMVV----------GIVPRDAGNIIIISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMARDSMGQSLSGGERRRVEIARALAANPKFILLD--EPFAGVDPISVIDIKRIIEHLR----DSGLGVLITDH................................................................................................ |
194 |
25 | -9.440 | d4hzia_ c.37.1.0 (A:) automated matches {Leptospira interrogans [TaxId: 267671]} |
ali model 3D-neighbors follow.. |
10 | 25 | ........................EIKTNEHCVLLGRNGAGKSTLVNLIY----------GMIWATSGTIRLFQGEIAIQDLRKRIGILDSSQEETKTLQILKDSDLLSKKDQLYNTLSSGEKKKIRSIVNEPDFLIMDE-----PCSSLDLTAREDFLGFLKEYHSKKKFTSLYITH................................................................................................ |
201 |
26 | -9.380 | d3kb2a1 c.37.1.1 (A:2-165) automated matches {Bacillus subtilis [TaxId: 1423]} |
ali model 3D-neighbors follow.. |
9 | 1 | .............................TLIILEGPDCCFKSTVAAKLSKEL--KYPIIKGSSFE-------LAKSGNEKLFEHFNKLADEDNVIIDRFVYSNLVYAKKFKDYSILTERQLRFIEDKIKAKAKVVYLHAKKRLRVRGDEEGKDIDSILELYREVMSNAGLHTYSWDTGQWSSDE......................................................................................... |
154 |
27 | -9.310 | d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]} |
ali model 3D-neighbors follow.. |
12 | 28 | ................PPQAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVREAI----------KGGKSLYVVAGEKYESFKKRIGISTGDYESRDEHLGDCDIIVTTSEK-------DSLIRNRASWIKAVSCLVVDEIHLL--DSEKRGATLEILVTKMRRMNKALRVIGL.................................................................................................... |
178 |
28 | -9.260 | d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]} |
ali model 3D-neighbors follow.. |
15 | 2 | ..........................LGGNILLLSGHPGSGKSTIAEALANLPGV-------------PKVHFHSDDLWGYIKHGRIDPWLPQSHQQNRMIMQIAADVAGR--LDGVVRPDWLPAFTALARPLHYIVLRTIERCLDRGGDSLSDPLVVADLHSQFADLGAFEHHVLPVSGKDTDQALQSAINALQSGRFRI......................................................................... |
175 |
29 | -9.250 | d2nq2c_ c.37.1.0 (C:) automated matches {Haemophilus influenzae [TaxId: 727]} |
ali model 3D-neighbors follow.. |
14 | 26 | ........................DLNKGDILAVLGQNGCGKSTLLDLLLHRPIQGK-------IEVYQSIGFVPQFFSSPFAYSVLDIVKSHDYQVAMQALDYLNLTHLAKREFTSLSGGQRQLIRAIASECKLILLDE-----PTSALDLANQDIVLSLLIDLAQSQNMTVVFTTH................................................................................................ |
186 |
30 | -9.250 | d1gkub1 c.37.1.16 (B:6-250) Helicase-like "domain" of reverse gyrase {Archaeoglobus fulgidus [TaxId: 2234]} |
ali model 3D-neighbors follow.. |
12 | 36 | ...........VGEPRAIQKMWAKRILRKESFAATAPTGVGKTSFGLAMSLFLAL---------KGKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENLIEKENFMQNLRNFKIVITTTQFLSKHYRELGHFDFIFVDDVDAILKASKNVDKLLHLLLKTKSWVGEARGCLMVSTATAKKGKKAELFRQLLNFDIGSSRIT........................................................................ |
232 |
31 | -9.240 | d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} |
ali model 3D-neighbors follow.. |
10 | 4 | ..............................IILTIGCPGSGKSTWAREFI--------------AKNPGFYNINRDDYRQSIMAHEERDEYKYTKKKEGIVTGMQF--------------DTAKSILYGGDSVKGVIIS-----------DTNLNPERRLAWETFAKEYGWKVEHKV................................................................................................. |
111 |
32 | -9.230 | d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]} |
ali model 3D-neighbors follow.. |
16 | 73 | ................DYQEKALERWLVDKRGCIVLPTGSGKTHVAMAAINEL------------STPTLIVVPTLALAEQWKERLGIF-----------------------------GEEYVGEFSGRIKELKPLTVSTYDSAYVNAEKLGNRFMLLI----------------VHHLPAESYVQIAQMSIAPFRGLTA.......................................................................... |
203 |
33 | -9.210 | d1vdza1 c.37.1.11 (A:60-113,A:191-439) A1 ATP synthase A subunit, central domain {Pyrococcus horikoshii [TaxId: 53953]} |
ali model 3D-neighbors follow.. |
14 | 82 | .....................VIDTFFPGGTAAIPGPFGSGKTVTQHQLA------------KWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIAEYFRALMADSTSRW-------AEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVS........................................................................ |
252 |
34 | -9.210 | d1wcv1_ c.37.1.0 (1:) automated matches {Thermus thermophilus [TaxId: 262724]} |
ali model 3D-neighbors follow.. |
18 | 5 | ..............................IALANQKGGVGKTTTAINLAAYLALGKRVLLVDLDPQGNATSGLGVRAERGVYHLLQGEPLEGLVHPVDGFHLLPATPDLVGATVELAGAPTALREALRDEGYDLVLLDTLNALAAAEG-ALEGVAGLLATLEEVRAGLNLGILVTMYDGRTLLAQQVEAQLRAHFGEKVFWTVIPRNVRLAEAPSFGKTIAQHAPTSPGAHAYRRLAEE.................................. |
237 |
35 | -9.060 | d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]} |
ali model 3D-neighbors follow.. |
10 | 11 | ................................AILGGESSGKSVLVNKLAAVFNTGREFVFEKLGGDEQAM--QYSDYPQMALGHQRYIDYAVRHSHKIAFIDTDFITTQACIQYEGKAHPFLDSMIKEYPFDVTILLKNNTEWVDDGLGSQKQRQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLNEEEISELQN.................................................................... |
192 |
36 | -9.000 | d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Sulfolobus solfataricus [TaxId: 2287]} |
ali model 3D-neighbors follow.. |
12 | 27 | ........................NIENGERFGILGPSGAGKTTFMRIIA-VPSTGELYFDDRLVASNGKLIVPPEDSKEEIRKRVEEVAKILDIHH---------VLNHFPRELSGAQQQRVALARALVKDPSLLLLDPFSNL------DARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIAD...................................................................................... |
209 |