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Query: d1um1a1 b.36.1.1 (A:8-104) Hypothetical protein KIAA1849 {Human (Homo sapiens) [TaxId: 9606]}, from SCOP207

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst YVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGKKMRFLVAKSDVETAKKIHLast
1 -57.900d1um1a1 b.36.1.1 (A:8-104) Hypothetical protein KIAA1849 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors  100  1YVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGKKMRFLVAKSDVETAKKIH 97
2 -47.900d2fe5a1 b.36.1.1 (A:223-314) Synapse-associated protein 102 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  32  2.IMEVNLLKGPKGLGFSIAGGIGNQHGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPGS....... 92
3 -47.900d2iwoa_ b.36.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  27  1.LRTVEMKKGPTSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNASGSIEMQVVAGGDVSETSV. 96
4 -46.800d3axaa_ b.36.1.1 (A:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  30  3.IITVTLKKQ-NGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIRREW.. 95
5 -46.800d2daza1 b.36.1.0 (A:8-118) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  27  19.LHIIELEKDKNGLGLSLAGNKDR--SRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRNEDAVNQ... 109
6 -46.600d2iwna_ b.36.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  27  5.TFDVELTKNVQGLGITIAGYIGDKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS..... 96
7 -46.400d2koja1 b.36.1.0 (A:450-558) automated matches {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  30  10.RLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTEGTVSLLVFRQEEAFHPR.. 105
8 -45.900d3b76a1 b.36.1.0 (A:408-502) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  22  1HEKVVNIQKDPGSLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTSSSIVLKALEVKEGS..... 93
9 -45.200d2opga1 b.36.1.1 (A:1625-1716) Multiple PDZ domain protein {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  31  3.ETTIEISKGRTGLGLSIVGGSDTLLG--AIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRVRLTLYRDEAP...... 90
10 -44.700d5fb8c_ b.36.1.0 (C:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  26  4.VCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPGPVTIVIRRKS........ 92
11 -44.600d2jila_ b.36.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  28  4.TVEVTLHKEGNTFGFVIRGGAHDDRNSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEAALLIEYDVSETA.... 96
12 -44.500d2dlua1 b.36.1.0 (A:8-105) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  34  8HVEEVELINDGSGLGFGIVGGKTS-----GVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRMLVARDPAGDIS... 96
13 -43.800d2r4ha1 b.36.1.0 (A:2-86) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  36  2.FYTVELERGAKGFGFSLRGGREYNM---DLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRRVRLFLKRG......... 85
14 -43.800d2he2a1 b.36.1.1 (A:418-513) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  29  2.PRKVVLHKGSTGLGFNIVGGEDGE----GIFVSFILAGGPADLSGELQRGDQILSVNGIDLRGASHEQAAAALKGAGQTVTIIAQYQPEDYAR... 90
15 -43.200d2o2ta1 b.36.1.1 (A:119-227) Multiple PDZ domain protein {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  28  16HVEVFELLKPPSGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALQTITHQQAISILQKAKDTVQLVIARGSLPQ..... 109
16 -43.000d1n7ea_ b.36.1.1 (A:) Glutamate receptor-interacting protein 1, GRIP1 {Norway rat (Rattus norvegicus) [TaxId: 10116]}  ali model 3D-neighbors follow..  28  4.IYTVELKRYGGPLGITISGTEEP---FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTDAQPAS.. 94
17 -42.000d1ihja_ b.36.1.1 (A:) Inad {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}  ali model 3D-neighbors follow..  29  4.IHMVTLDKGKKSFGICIVRGEVKNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT.......... 93
18 -41.100d1ufxa1 b.36.1.1 (A:8-97) KIAA1526 protein {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  28  2...LVRVKKSAATLGIAIEGGANTRQP--LPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYID.......... 83
19 -41.000d3vqfa_ b.36.1.0 (A:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  28  2..FHVILNKPEEQLGIKLVRRVD----EPGVFIFNVLNGGVADRHGQLEENDRVLAINGHDLRFGSPESAAHLIQASERRVHLVVSRQ......... 85
20 -40.600d1x6da1 b.36.1.2 (A:8-113) Interleukin 16 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  19  10.HVTILHKEEGAGLGFSLAGGADLENK--VITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRKLTPEAM.. 101
21 -40.500d2w4fa_ b.36.1.1 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  28  3..LTLTILRQTGGLGISIAGGKGST-DDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRERETS..... 94
22 -40.100d1v62a1 b.36.1.1 (A:8-111) Glutamate receptor interacting protein 2, GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  23  9.PLMVEIVKTPGALGISLTTTSLR--NKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEKVRLEILPVPQSQRP... 100
23 -39.900d1uewa1 b.36.1.1 (A:8-108) Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  26  6...DVVIHRENEGFGFVIISSLNRPESTVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKDAGLSVTLRIIPQEELNSP... 101
24 -39.900d1p1da2 b.36.1.1 (A:115-213) Glutamate receptor interacting protein {Norway rat (Rattus norvegicus) [TaxId: 10116]}  ali model 3D-neighbors follow..  24  11.TFHVKLPKKHSELGITISSPSSRKPGD-PLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLVKLKIRKDED....... 99
25 -39.900d1ueqa1 b.36.1.1 (A:8-118) Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  22  13.FLSTTLKKSNMGFGFTIIGGDEPD---EFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVGQSVNLVLCRGYPLPFDP.. 105
26 -39.800d2q9va1 b.36.1.0 (A:839-922) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  26  2..QDIFLWRKETGFGFRILGGNEPGE---PIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNL............ 81
27 -39.700d2koha1 b.36.1.0 (A:581-689) automated matches {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  27  8.TFEVPLNDGSAGLGVSVKGNRSKNHADLGIFVKSIINGGAASKDGRLRVNDQLIAVNGESLLGKANQEAMETLRRSRGMIQLIVARRISRCNE... 109
28 -39.500d2gzva1 b.36.1.0 (A:19-105) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  28  4...KVTLQKDAQLIGISIGGGAQY---CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK.......... 85
29 -39.300d2ehra1 b.36.1.0 (A:8-117) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  31  11...IVEIFREPNSLGISIVGGQTVIKELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKNAGNPVVFIVQSLSSTPR.... 107
30 -39.200d2d92a1 b.36.1.0 (A:8-102) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  24  9.VKIVELVKDCKGLGFSILDYQDPLDTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPGLVHLGIC........... 95
31 -39.100d1v6ba1 b.36.1.1 (A:8-118) Harmonin {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  17  11.DVRLLRIKKEGSLDLALEGGVDSPVG--KVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAGDWIDLVVAVCPPKEYDD.. 106
32 -39.000d1rzxa_ b.36.1.1 (A:) GTPase-binding domain of the cell polarity protein par6 (Par-6B) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}  ali model 3D-neighbors follow..  24  6..VRLLKHGSDKPLGFYIRDGTSVRVKQPGIFISRLVPGGLAESTGLLAVNDEVIEVNGIEVAGKTLDQVTDMMVANSSNLIITVKPAN........ 98
33 -39.000d3cbza1 b.36.1.1 (A:264-367) Segment polarity protein dishevelled homolog Dvl-2 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  28  2.IITVTLNMEKNFLGISIVGQSNER-GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIPGPIVLTVAKSGGGSGNE.. 98
34 -38.800d1qava_ b.36.1.1 (A:) Syntrophin {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  26  7...RVTVRKADAGLGISIKGGRENKM---PILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY.......... 88
35 -38.700d1qaua_ b.36.1.1 (A:) Neuronal nitric oxide synthase, NNOS {Norway rat (Rattus norvegicus) [TaxId: 10116]}  ali model 3D-neighbors follow..  26  1NVISVRLFKRKGGLGFLVKERVSK----PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPEGFTT.. 92
36 -38.600d1wifa1 b.36.1.1 (A:8-120) hypothetical PDZ domain containing protein Uqcrc2 (4930408O21Rik) {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  26  21.VIQTKLTVGNLGLGLVVIQN------GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNIGTVLQIKAYRGFLEIPQEWQ 112
37 -38.200d1ujda1 b.36.1.1 (A:8-111) Hypothetical protein KIAA0559 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  27  15...SKDHTVSGNGLGIRIVGGKEIPGGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEICVRLD......... 101
38 -38.000d1v5qa1 b.36.1.1 (A:8-116) Glutamate receptor interacting protein {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  22  9.TTEVVLTADPVGFGIQLQGSVFATETSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVAESVI. 105
39 -37.800d1wi4a1 b.36.1.1 (A:8-103) Syntaxin binding protein 4 {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  25  9..FRVITVTKETGLGLKILGGINRNEGP-LVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRWEIAFIR.......... 96
40 -37.100d1mfga1 b.36.1.1 (A:1280-1371) Erbin {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  22  2..IRVRVEKDP-ELGFSISGGVGGR-DDDGIFVTRVQPEGPA--SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREVSS...... 92
41 -37.000d1x45a1 b.36.1.1 (A:8-92) Amyloid beta A4 precursor protein-binding family A member 1 (APBA1, X11) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  26  1...DVFIEKQKGILGVVIVESGWGS-ILPTVIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIKGLKNQSRVKLNI.......... 84
42 -36.600d2h2ba1 b.36.1.1 (A:18-120) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  29  6...TVTLHRAPGGFGIAISGGRDNPHGETSIVISDVLKGGPA--EGQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGGGWR... 98
43 -36.500d2cssa1 b.36.1.1 (A:8-115) Regulating synaptic membrane exocytosis protein 1, RIMS1 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  27  21...RTTMPKDSGLLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESEPQVEIIVSRP......... 108
44 -35.700d1m5za_ b.36.1.1 (A:) Glutamate receptor interacting protein {Norway rat (Rattus norvegicus) [TaxId: 10116]}  ali model 3D-neighbors follow..  25  8HKVTLYKDSGMEDFGFSVADGL----LEKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRNP........ 91
45 -34.800d3sfja_ b.36.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  22  8.EIHKLRQGENLILGFSIGGGIDQDPTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKSEEVVRLLVTRQ......... 103
46 -34.300d1kwaa_ b.36.1.1 (A:) Cask/Lin-2 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  19  2.SRLVQFQKNTEPMGITLKMNELN-----HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE...... 87
47 -34.300d2edva1 b.36.1.0 (A:8-90) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  24  3..HTVKIDKDTLLQDYGFHIS-----ESLPLTVVAVTAGGSA--HGKLFPGDQILQMNNEPAEDLSWERAVDILREAEDSLSITVVRCTS....... 83
48 -34.200d1wh1a1 b.36.1.1 (A:8-118) Hypothetical protein KIAA1095 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  28  13.LEEVDLYRSQDKLGLTVCYRTDDE-DDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTSENKNFSLLIARPELQLDEG.. 106
49 -33.300d3nfka_ b.36.1.1 (A:) Tyrosine-protein phosphatase non-receptor type 4, PTPN4 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  16  3.LVLIRMKPDENGFGFNVKGGYDQKM---PVIVSRVAPGTPADLVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRP...... 91
50 -33.300d2yuba1 b.36.1.0 (A:8-112) automated matches {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  17  9.VTLISMPATTECRGFSVTVESASSNYATTVQVKEVNRMISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDPVPQRLD.. 104
51 -32.800d3bpua1 b.36.1.0 (A:640-721) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  25  2.LITVHIVKGPMGFGFTIADSPGGG----GQRVKQIVD---SPRSRGLKEGDLIVEVNKKNVQALTHNQVVDMLVESGSEVTLLVQR.......... 82
52 -32.600d1x5na1 b.36.1.1 (A:8-108) Harmonin {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  31  11...KVFISLGSRGLGCSISSGPIQ---KPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSSRSLTISIVAAAGRELFMT.. 99
53 -32.300d4uu5a1 b.36.1.0 (A:251-335) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  26  4.VKIVRIEKARIPLGATVRNEMD------SVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPS......... 85
54 -32.300d4n6xa1 b.36.1.1 (A:11-99) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  38  5....CCLEKGPNGYGFHLHGEK----GKLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETST..... 87
55 -31.700d4q2qa_ b.36.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  27  2..MKLVKFRKGDSVGLRLAGGNDV-----GIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTI............ 78
56 -31.200d1wi2a1 b.36.1.1 (A:8-98) PDZ domain containing protein 11, Pdzk11 {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  26  11...IVTLKKPPGQLGFNIRGGKASQ---LGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKTAR-EISMRV............ 88
57 -30.900d2edpa1 b.36.1.0 (A:8-94) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  24  5.YVPVQL-QGGAPWGFTLKGGLEHCE---PLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYG-SRQEALILIKGSFRILKLIVRRRN........ 87
58 -30.700d2eeha1 b.36.1.0 (A:8-94) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  31  4.IHSVRVEKSPAGLGFSVRGGSEHGL---GIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTSS-SRLHMMVRR.......... 85
59 -30.500d3qe1a1 b.36.1.0 (A:39-206) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}  ali model 3D-neighbors follow..  34  3...VVRIVKSESGYGFNVRGQVSEGLYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVLSVESES..... 99
60 -29.700d2kv8a_ b.36.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  29  5...SVEVARGRAGYGFTLSG-------QAPCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVIAEG......... 81
61 -29.200d2q3ga1 b.36.1.0 (A:1-84) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  30  4..FKVVL-EGPAPWGFRLQGGKDFNV---PLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSRA......... 84
62 -28.800d3khfa1 b.36.1.0 (A:948-1040) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  25  3...PIVIHSSGKKYGFSLRAIRDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSGNKISLRT............ 87
63 -28.700d2f5ya1 b.36.1.1 (A:15-95) Regulator of G-protein signaling 3, RGS3 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  22  5....ITIPRGKDGFGFTICC-------DSPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRM......... 80
64 -28.600d1uf1a1 b.36.1.1 (A:7-122) KIAA1526 protein {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  37  17...KVNLVLGDGSLGLTIRGGAEYGL---GIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSSR-HLILTVKD.......... 96
65 -28.200d2yuya1 b.36.1.0 (A:8-120) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  30  4...TVTLKRTSQGFGFTLRHQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSV............ 109
66 -27.400d2egoa1 b.36.1.0 (A:96-189) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}  ali model 3D-neighbors follow..  25  5...VLTLEKGDNTFGFEIQTHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDIIKASGNVLRLET............ 90
67 -26.900d1q3oa_ b.36.1.1 (A:) Shank1, PDZ domain {Norway rat (Rattus norvegicus) [TaxId: 10116]}  ali model 3D-neighbors follow..  27  10....LLQKKDSEGFGFVLRGAKPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKV............ 98
68 -26.800d1r6ja1 b.36.1.1 (A:197-273) Syntenin 1 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  25  2...TITMHKDSTGVGFIFKNG----------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITI............ 73
69 -26.700d1y7na1 b.36.1.1 (A:12-90) Amyloid beta A4 precursor protein-binding family A member 1 (APBA1, X11) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  21  3.TVLIRRPDLRYQLGFSVQNG----------IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKT............ 75
70 -26.300d2dlsa1 b.36.1.0 (A:8-87) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  28  5....VIIQKDQHGFGFTVSG-------DRIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIKSGAYVALTLL............ 77
71 -25.500d1w9ea1 b.36.1.1 (A:113-194) Syntenin 1 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  24  2...EVILCKDQGKIGLRLKSIDN------GIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAGEKITMTIRDRP........ 82
72 -25.200d2vsva1 b.36.1.0 (A:514-594) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  19  3...SIRFTAEEGDLGFTLRG-------NAPVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGE.................. 70
73 -17.600d1fc6a3 b.36.1.3 (A:157-248) Photosystem II D1 C-terminal processing protease {Algae (Scenedesmus obliquus) [TaxId: 3088]}  ali model 3D-neighbors follow..  20  5...........TGVGLEITYDGGSGKD---VVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQEADSQVEVVLHAPGAPSNT... 84
74 -16.200d3cs0a2 b.36.1.4 (A:359-446) Protease Do (DegP, HtrA), C-terminal domains {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  19  23..........................KDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVKNI--AELRKVLDSKPSVLALNIQRGDST...... 84
75 -15.900d4yo1a1 b.36.1.0 (A:240-337) automated matches {Legionella pneumophila [TaxId: 446]}  ali model 3D-neighbors follow..  17  1......IHRGLMGIFVQLAQSMGYAEDFQGALVSQVNQNSPAQLAG-LKSGDVIVQINDTKITQATQVKTTISLLRAGSTAKIKILRDNKPLTLDVE 95
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang Y, Stec B, Godzik A. Between order and disorder in protein structures: analysis of "dual personality" fragments in proteins. Structure. 2007 Sep;15(9):1141-7.