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Query: d1wb4a2 c.69.1.2 (A:803-1077) automated matches {Clostridium thermocellum [TaxId: 1515]}, from SCOP207

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst SFKYESAVQYRPAPDSYLNPCPQAGRIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSEDIAYANMNPQIEAMKALPHFDYTSDFSKGNFYFLVAPGATHWWGYVRHYIYDALPYFFHELast
1 -105.000d1wb4a2 c.69.1.2 (A:803-1077) automated matches {Clostridium thermocellum [TaxId: 1515]}  ali model 3D-neighbors  100  1SFKYESAVQYRPAPDSYLNPCPQAGRIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSEDIAYANMNPQIEAMKALPHFDYTSDFSKGNFYFLVAPGATHWWGYVRHYIYDALPYFFHE 275
2 -81.500d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]}  ali model 3D-neighbors follow..  26  1.....SLPTMPPSGYDQVRNGVPRGQVVNISYFSTNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAADGYENFTKDLLNSLIPYIESNYSVY----------TDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNERLFPD------GGKAAREKLKLLFIACGTNDSLIGFGQRVHEYCVA----------NNINHVYWLIQGGGHDFNVWKPGLWNFLQMADEA 250
3 -64.000d3c8da2 c.69.1.2 (A:151-397) Enterochelin esterase, catalytic domain {Shigella flexneri [TaxId: 623]}  ali model 3D-neighbors follow..  11  5................WDCPQAPEIPAKEIIWKSLKNSRRVWIFTTGDVTA-EERPLAVLLDGEF------WAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRNADFWLAVQQELLPLVKVIAPF----------SDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEGLRIVLEAGIRE----------PMIMRANQALYAQLHPIKESIFWRQVDGGHDALCWRGGLMQGLIDLWQP 244
4 -56.600d4b6ga1 c.69.1.0 (A:3-275) automated matches {Neisseria meningitidis [TaxId: 122586]}  ali model 3D-neighbors follow..  10  2................IEQHQIFGGSQQVWAHHALQCEMKFAVYLPNNPE-NRPLGVIYWLSGLTCTEQNFITKSGRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSQMYDYILNELPRLIEKHFPT-------------NGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSLGKDREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRA-------ANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAF 271
5 -40.300d4qeka_ c.69.1.3 (A:) automated matches {Mycobacterium tuberculosis [TaxId: 83332]}  ali model 3D-neighbors follow..  11  11............................QVPSASMGRDIKVQFQGG-------GPHAVYLLDGRAQDDYNGWDINTPAFEEYYQ-------SGLSVIMPVGGQSSNYTYKWETFLTREMPAWLQANKGV------------SPTGNAAVGLAMSGGSALILAAYYPQQFPYAASLSGFLMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTNQTFRDTNGVFNFPPNGTHSWPYWNEQLVAMKADIQH. 277
6 -37.300d2gzsa_ c.69.1.38 (A:) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  14  9....................VFYHFSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDG-----------NAVMDRLDDELKQLSEKTPPVIVAVGYQTNSGGSNNFRQLLETRIAPKVEQGLNI------------DRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPSLGRGYD-----ALLSRVTAVEPLQFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHG-PMFNASFRQALLDISGE 265
7 -20.700d4cg1a1 c.69.1.16 (A:1-261) automated matches {Thermobifida fusca [TaxId: 2021]}  ali model 3D-neighbors follow..  15  10..........PTDALLEARSGPFSVSEENVSRLSASGFGGGTIYYPRE---NNTYGAVAISPGYTGTEASI-------AWLGERIASHG----FVVITIDTITTLDQPDSRAEQLNAALNHMINRASSTVRSRIDSSRL-------AVMGHSMGGGGSLRLASQRPDLKAAI-PLTPW-----------------HLNKNWSSVTVPTLIIGADLDTIAPVATHAKPFYNSLP--------SSISKAYLELDGATHFAPNIPNKIIGKYSVAWLK 227
8 -20.400d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]}  ali model 3D-neighbors follow..  15  12.................................................AGVAGAPLFVLLHGTGGDENQFFD------------FGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLI--------------PFEPKISPAKPTRRVLITAGERDPICP---------VQLTKALEESLKAQGGTVETVWHPGGHE----SGEIDAVRGFL... 199
9 -19.500d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]}  ali model 3D-neighbors follow..  11  9.................................................GKDTSKPVLLLLHGTGGNELDLLP------------LAEIVDSEASVLSVRGNVLENGMPRFFRRLEEDLIFRTKELNEFLDEAAKEYKFDRNN---VAIGYSNGANIAASLLFHYENALKGAVLHHPMV--------------PRRGMQLANLAGKSVFIAAGTNDPICS---------SAESEELKVLLENANANVTMHWENRGHQLT--MGEVEKAKEWY... 198
10 -19.300d4a5sa2 c.69.1.0 (A:509-766) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  11  13...................................ETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQK--ADTVFRLNWATYLASTEN----IIVASFDGRGSGYQGDKIMHAINRRL--TFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCF...... 255
11 -19.100d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]}  ali model 3D-neighbors follow..  10  18.................................................AGKESRECLFLLHGSGVDETTLVP------------LARRIAPTATLVAARGRIPQEDGFRWFERIQKSILAETAAFAAFTNEAAKRHGLNLDH---TFLGYSNGANLVSSLMLLHPGIVRLAALLRPMP--------------VLDHVPATDLAGIRTLIIAGAADETYGPFVPALVTLLS----------RHGAEVDARIIPSGHD----DPDAAIVRQWLAGP 209
12 -18.900d3og9a_ c.69.1.0 (A:) automated matches {Lactococcus lactis [TaxId: 272623]}  ali model 3D-neighbors follow..  8.................................................AGRKDLAPLLLLHSTGGDEHQLVE------------IAEMIAPSHPILSIRGRINEQGVNRYFKL-LESLDEETDWLTDEVSLLAEKHDLDVHK---IAIGYSNGANVALNMFLRGKINFDKIIAFHGMQ--------------LEDFEQTVQLDDKHVFLSYAPNDMIVP---------QKNFGDLKGDLEDSGCQLEIYESSLGHQ----QEEVLAAKKWL... 202
13 -18.800d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  11  2.........................KVEYRDIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQS--VAEKFEVSWETVMVSSHG----AVVVKCDGRGSGFQGTKLLHEVRRRL--LLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAQGQTFTCGSALSPITYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADE-FQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECFRI.... 258
14 -17.800d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]}  ali model 3D-neighbors follow..  12  18................................................RIPEAPKALLLALHGLQGSKEHILA-------LLPGYAERG----LLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQVVEDPGVLAATRGEAYGGVPLLHLHGSRDHIVPRMEKTLEALRPH--------YPEGRLARFVEEGAGHT-PLMARVGLAFLEHWLEA 237
15 -17.800d4h0ca1 c.69.1.0 (A:1-207) automated matches {Dyadobacter fermentans [TaxId: 471854]}  ali model 3D-neighbors follow..  13  14.................................................PVQRAKKAVVMLHGRGGTAADII-----------SLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIEAQGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQE----------LAIGNYKGDFKQTPVFISTGNPDPHVP--------VSRVQESVTILEDMNAAVSQVVYPGRPHT----GDEIQLVNNTILK. 207
16 -16.700d4fhza1 c.69.1.0 (A:49-267) automated matches {Rhodobacter sphaeroides [TaxId: 1063]}  ali model 3D-neighbors follow..  13  13.................................................APGEATSLVVFLHGYGADGADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQPWLDGSSETAAAEGMAAAARDLDAFLDERLAEEGLPPEA---ALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPERLAEEARSKPP-------------VLLVHGDADPVVP--------FADMSLAGEALAEAGFTTYGHVMKGTGHG----PDGLSVALAFL... 214
17 -15.800d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]}  ali model 3D-neighbors follow..  11  10........................AGSRLVWVESFDG-SRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSD-----SWDTFAASLAAAG----FHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLA---SELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNDSRTP--------LKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAV.......... 244
18 -15.000d1vkha1 c.69.1.32 (A:1-261) Putative serine hydrolase Ydr428c {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  3.........................NTVRAISPDITLFNKTLTFQEIS---QNTREAVIYIHGGAWNDPE--NTPNDFNQLANTIKSMDTESTVCQYSIE--------------------------YRLSPEITNPRNLEKGLTNINMVGHSVGATFIWQILAALKDVFLLDGIYRLAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLT--------LRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKNGKVAKYIFDNI.. 260
19 -14.400d4f21a1 c.69.1.0 (A:1-222) automated matches {Francisella tularensis [TaxId: 177416]}  ali model 3D-neighbors follow..  14  8.................................................PAKQARFCVIWLHGLGADGHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSLNRVVDAKVNKLIDSQVNQGIASEN---ILAGFSQGGIIATYTAITSQRKLGGIMALSTYL----------PAWDNFKGKITSINKGLPILVCHGTDDQVLP--------EVLGHDLSDKLKVSGFANEYKHYVGMQHS--VCMEEIKDISNFI... 216
20 -14.400d3fcya_ c.69.1.0 (A:) automated matches {Thermoanaerobacterium sp. [TaxId: 60708]}  ali model 3D-neighbors follow..  23EYWNRALDEMRSVDPKIELKESSFQECYDLYFTGVRGARHAKYIKPKT---EGKHPALIRFHGYSSNSGDWNDKL--------NYVAAG----FTVVAMDVRGQGGQSQDVGGHIIRGLDDDADNMLHIFLDTAQLAGIVMDEDRVGVMGPSQGGGLSLACAALEPRVRKVVSEYPFLSDYKERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQVCP-----------PSTVFAAYNNIQSKKDIKVYPDYGHE-RGFGDLAMQFMLELYS. 317
21 -14.300d2jbwa1 c.69.1.41 (A:8-365) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]}  ali model 3D-neighbors follow..  10  105.........................PAERHELVVDGIPMPVYVRIPEG---PGPHPAVIMLGGLESTKEESFQ-------MENLVLDRG----MATATFDGPGQGEMFEYKREKYTSAVVDLLTKLEAI------------RNDAIGVLGRSLGGNYALKSAACEPRLAACISSWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDEVLSFVDTVLELVPAEHL------------NLVVEKDGDHCCHNLGIRPRLEMADWLYD 341
22 -14.300d3u0va_ c.69.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  12  8.................................................PAGRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRF-LESIDVMCQVLTDLIDEEVKSGIKKNR---LIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFL---------NKASAVYQALQKSNGVLPELFQCHGTADELVL--------HSWAEETNSMLKSLGVTTKFHSFPNVYHE--LSKTELDILKLWI... 217
23 -14.000d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  11  1........................AASVEQREGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQN------GTLHRLAQAG---RAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDAL-----------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPI-------------CTDKINAANYASVKTPALIVYGDQDPMGQTSFEHLKQLPNHR--------------VLIMKGAGH--EEWHTGLLDFLQGL... 208
24 -13.900d1fj2a1 c.69.1.14 (A:1-224) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  12  11.................................................AARKATAAVIFLHGLGDTGHGWAEAFAGIR--IKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWL---------PLRASFPQGPIGGANRDISILQCHGDCDPLVP-------MFGSLTVEKLKTLVNPANVTFKTYEGMMHS--SCQQEMMDVKQFI... 217
25 -13.800d4zv9a1 c.69.1.0 (A:60-294) automated matches {Escherichia coli [TaxId: 83334]}  ali model 3D-neighbors follow..  12  12...........................EYITYPSPNGHGEVRGYLVKPAKMSGKTPAVVVVH-------ENRGLNPYIEDVARRVAKAG----YIALAPDGLNSVGGYPGNDDK-GRELQQQVDPTKLMNDFFAAIEFMQRYPQATGITGFCYGGGVSNAAAVAYPELACAVPFYGRQ-----------------APTADVAKIEAPLLLHFAELDTRIEGWPAYEAALKANNKVYEAYIYPGVNHGFHNDSTPRYDKSAADLAWQRTLKWF... 231
26 -13.700d3dkra_ c.69.1.0 (A:) automated matches {Lactobacillus rhamnosus [TaxId: 486408]}  ali model 3D-neighbors follow..  11  1..........................................FRKPQPFEYEGTDTGVVLLHAYTGSPN-------DMNFMARALQRSG---GVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAH---------MTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTTFIGQAGQDELVD---------GRLAYQLRDALINAARVDFHWYDDAKHVITV-HHALEEDVIAFMQQ 238
27 -13.700d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]}  ali model 3D-neighbors follow..  11  9.................................................PAKPADACVIWLHGLGADRYDFMPVAEALQESLLTVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINQGPLGGVIALSTYA-----------PTFGDELELSASQQRIPALCLHGQYDDVVQ----------AMGRSAFEHLKSRGVTVTWQEYPMGHE--VLPQEIHDIGAWL... 213
28 -13.600d3kxpa_ c.69.1.0 (A:) automated matches {Mesorhizobium loti [TaxId: 381]}  ali model 3D-neighbors follow..  16................................................VREKGSGPLMLFFHGITSNSAVF-------EPLMIRLSDRFT-----TIAVDGLSDKPETGYEANDYADDIAGLIRT----------------ARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFT................................................................................................. 122
29 -13.500d2xmza_ c.69.1.0 (A:) automated matches {Staphylococcus aureus [TaxId: 1280]}  ali model 3D-neighbors follow..  8................................................EANVETNQVLVFLHGFLSDSRTY-------HNHIEKFTDNYHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDK----------------KDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLI.. 210
30 -13.200d1r3da1 c.69.1.35 (A:2-263) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]}  ali model 3D-neighbors follow..  9.................................................KPTARTPLVVLVHGLLGSGADW--------QPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQA-------------HVTSEVPVILVGYSLGGRLIMHGLAQGRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQVCGEQDSKFQQLAESSGLSYSQVAQAGHN-QAFAKIVQAMIHSI... 260
31 -13.100d5frda1 c.69.1.0 (A:1-252) automated matches {Archaeoglobus fulgidus [TaxId: 2234]}  ali model 3D-neighbors follow..  10  16................................................LLKGRERKVFYI-HSSGSDATQWVNQLTAIGGYAIDLPNHGQ-------------SDTVEVNSVDEYAYYASESLKKTV----------------GKAVVVGHSLGGAVAQKLYLRNPEICLALVLVGTGARLRVLPEILEGLKKEPEKRNGKLKIGVPTLVIVGEEDKLTKYHEFFHKHIPNSE--------------LVVIPGASHKHVEFNEALEKFLKKV... 249
32 -12.900d3hssa1 c.69.1.0 (A:2-261) automated matches {Mycobacterium tuberculosis [TaxId: 1773]}  ali model 3D-neighbors follow..  17  5................................................YDDNGTGDPVVFIAGRGGAGRTW-------PHQVPAFLAAG---RCITFDNRGIGATENAEGFTQTMVADTAALIET----------------DIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATR................................................................................................. 112
33 -12.800d1odtc_ c.69.1.25 (C:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]}  ali model 3D-neighbors follow..  26EFWKLSLEELAKVQAEPDLQPVDYPKVYRLTYKSFGNARTGWYAVPDK---EGPHPAIVKYHGYNASYDGEIHE-------MVNWALHG----YATFGMLVRGQQSSEDTYYRGVYLDAVRALE--ISSFDE--------VDETRIGVTGGAQGGGLTIAAAALSDIPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTSTVFAAYNHLETKKEL-------------KVYRYFGHEYPAFQTEKLAFFKQHLK. 317
34 -12.700d4wy8a1 c.69.1.0 (A:3-319) automated matches {Rhizomucor miehei [TaxId: 1031333]}  ali model 3D-neighbors follow..  44...................EGLPDVYLEEKTINR-GSKIELTITRPLD-TENQVLPPIVFFHGGG-----WVVGSKLTHRRTVYELTVR--ARAAVIFVNYSLSP-----------EVRFPTLEECLDAVAKEENAKSINVDPTKLVVAGDSAGGNLSAVVCIRAKQLGLNIIKGQVLIYPVTDDNFETDSYKQFAENYYLTRKLMVWFVITAEADVLREEGEAYARKLIEAGNDVTAVRYLGIIHGIFNLATLSPTGSEILDHIVAWLQKTWK. 317
35 -12.600d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]}  ali model 3D-neighbors follow..  3.........................KTIAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAG-------LAEYLSTNG----FHVFRYDSLHHVGLSSGSIDEFKNSLCTVYH---------------TKGTQNIGLIAASLSARVAYEVISDLE--LSFLITAVGVVNLRDRDCFEHHWDTLDSTLDKVANTSVPLIAFTANND----------DWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLGENLVVLRNFYQSVTK. 256
36 -12.600d2pu6a_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]}  ali model 3D-neighbors follow..  12  24................................................YNEAGNGETVIMLHGGGPGAGGW---SNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDA----------------DIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPG................................................................................................. 135
37 -12.500d1ys1x_ c.69.1.18 (X:) automated matches {Burkholderia cepacia [TaxId: 292]}  ali model 3D-neighbors follow..  17  5..................................................AATRYPII-LVHGLTGTDKYAGVLE---YGIQEDLQQRG---TVYVANLSGFQSDDGPNGRGEQLLAYVKTVLAA---------------TGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGT.................................................................................................. 112
38 -12.300d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]}  ali model 3D-neighbors follow..  16  16................................................YLEAGKGQPVILIHGGGAGAESEGNWRNVIPILARHY----------VIAMDGKTAKPDIEYTQDRRIRHLHDFIKA-----------------DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSA................................................................................................. 126
39 -12.300d3bdia1 c.69.1.0 (A:1-206) automated matches {Thermoplasma acidophilum [TaxId: 273075]}  ali model 3D-neighbors follow..  11  11......................................NGTRVFQRKMVTDSNRRSIA-LFHGYSFTSMDW-----DKADLFNNYSKIG------VYAPDGRSASSEKYGIDRGDLKHAAEFIRDYLKAN-----------GVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPA--------------WVESLKGDMKKIRQKTLLVWGSKDHVVPIALS------------KEYASIISGSRLEIVEGSGHP-EEFVRITVDFLRNL... 206
40 -12.200d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]}  ali model 3D-neighbors follow..  12  1.................................NLEIGKSILA-VLTNYHDVGEGQPVILIHGSGPGVSAYANWRLTIPALSKFY----------VIAPDGFTDRPENYNYSDSWVDHIIGIMDA----------------EIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAA................................................................................................. 127
41 -12.200d4pw0a_ c.69.1.0 (A:) automated matches {Chitinophaga pinensis [TaxId: 485918]}  ali model 3D-neighbors follow..  11  20...........................................YRSLGAPSD---IPLICFQHFTGTLDNW-----------DPLITNGLSKGRQLIIFDNKGSSGTTPDNVAAMTADALEFITA----------------GIRYFDVLGFSLGGFIVQYMAHIQPDMIRKIIIVGAAPQGVKVLHTFPDLIARAMQLEPKERFLFIFFVVQGSNDEMMDNSYELFKQLPDAI--------------LSLYPDAAHG-ELFVSQTEYFLD..... 273
42 -12.200d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]}  ali model 3D-neighbors follow..  12  18...........................................ALVAGDPQS---PAVVLLHGAGPGAHAASNWRPIIPDLAENF----------VVAPD-ETYPGHIMSWVGMRVEQILGLMNH----------------GIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSV................................................................................................. 134
43 -12.200d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]}  ali model 3D-neighbors follow..  12  10..........................................VELWSDDFGDPADPALLLVMGGNLSALGW-------DEFARRLADGG----LHVIRYDHRDTGRSTT--FGELAADAVAVLDG-------------WGVDRAH--VVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSK........................................... 181
44 -12.100d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]}  ali model 3D-neighbors follow..  11  1...........................PEVIFNGPAGRLEGRYQPS----KEKSAPIAIILHPHPQFGGT------MNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHG-LSDAASALD------------QSLHPDSKSCWVAGYSFGAWIGMQLLMRRPEIEGFMSIAPQP---------------NTYDFSFLAPCPSSGLIINGDADKVAPDVNGLVEKLKTQKGILIT---------HRTLPGANHFFNGKVDELMGECEDYLDR 208
45 -12.100d3rm3a_ c.69.1.0 (A:) automated matches {Bacillus sp. [TaxId: 129908]}  ali model 3D-neighbors follow..  15  1..................................MSEQYPVLSGAEPFYAENGPVGVL-LVHGFTGTPH-------SMRPLAEAYAKAG----YTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGW---------LKQRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAA.................................................................................................. 122
46 -12.100d5mifa_ c.69.1.0 (A:) automated matches {Tuber melanosporum [TaxId: 656061]}  ali model 3D-neighbors follow..  12  38...................PSTEFTTKILSLPVGPTGNVTAYLYKPVSGEREKGLPVIAYFHGGG-----WVFGGPKSYRGLITNLIRE--SGAAVFFVDYT----------------LTP--KVAYPVPNEQEHGEKLGVDPTNMGFGGDSAGGELSSSVSLLSIKRKTPLPKFQVLIYPATDLACESATFKEFPNGPGLTTDEIRFAIVVAEVDPIRQQGEDFGRRLQK----------LGVRAAIIRVLGTIHGF................. 286
47 -12.100d5a62a_ c.69.1.0 (A:) automated matches {Candidatus nitrososphaera [TaxId: 497727]}  ali model 3D-neighbors follow..  11  10..........................................VSTYYEDHGDARSYPLVLIHPIGGNILIW-------DYEIQLLLKSG------VIAYEHRTNMGKTGAYTQDLIDDLRRLLEH----------------NIGKCTIIGHSIGGIISSMYAAQHPGKVDAIIMINGSPKKFQEKDLEKHFRTREVAIQGLRASGCKVFAIVGSDDDVFMRLIKETKEEIPEMELR-------------VLQGSDH--KEMYDILMGFLAIVTKD 271
48 -11.900d4i3fa1 c.69.1.0 (A:1-282) automated matches {Cycloclasticus sp. [TaxId: 385025]}  ali model 3D-neighbors follow..  13  15...........................................LNEAGTDKD---TSILLLHGSGPGANAMSNWQYALPFLAENY----------CLAPD--CPPNGTSHWIDIWVQQQIDLLDA----------------GIEQTHIVGNSMGGGVTLHLLNRHPERFKKAVLMGPV................................................................................................. 130
49 -11.900d4v2ia_ c.69.1.0 (A:) automated matches {Thalassospira sp. [TaxId: 1485225]}  ali model 3D-neighbors follow..  12  43...................AKPAVDITDTTFAVGPTGATKVRIIRPQG--NTDRLPVIVYFHGAG-----WVMGDTGTHDRLVRELSVR--ANAALVFVDYERSP-----------EARYPVIEQDYAVTK-AEHSEQLNVDPTRLAIAGDSVGGNMTAVVSLLAQERGGPDITAQVLFYPVTDADFDNGSYTEFANGPWLTKPAMDWFVITAENDVLRDEGEAYARKLSQ----------AGVDVTVTRYNGTIHDF................. 286
50 -11.900d5egna_ c.69.1.0 (A:) automated matches {Uncultured bacterium [TaxId: 77133]}  ali model 3D-neighbors follow..  13  12................................................YDSYGEGVPIVFLHPFSTNGGIW-------YFQTFPFAQTNH-----VIVIDGRSDKPATGYSIMEHADDVVAVLDA----------------KVDRAVFVGNSIGGMIAMQLNLDHPQRVIGNLILSSG................................................................................................. 118
51 -11.700d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]}  ali model 3D-neighbors follow..  10  49.........................SLRELSAPGLDGDPEVRFVTPDN--TAGPVPVLLWIHGGGFAIGTAESSDPFCVEVAREL-------GFAVANVEYR----------------LAP-VNDCYAALL-HAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVSMTNFVDTPLWHRPNAILYLSTMELDPLRDEGIEYALRLLQ----------AGVSVELHSFPGTFHGSALVAT............ 296
52 -11.700d5w15a1 c.69.1.0 (A:1-267) automated matches {Burkholderia ambifaria [TaxId: 398577]}  ali model 3D-neighbors follow..  17................................................WGTLGEGPPLVLVHGTPFSSQVW-------RRIAPWLARRHR-----VFFYDGQSDMPDADVSLGRQNVLFGALLDE----------------KISRPRVLAHDYGGATVLRAHFLDGIAYSDLTLVNPV................................................................................................. 123
53 -11.600d4uhca1 c.69.1.0 (A:2-275) automated matches {Planctomycetes bacterium [TaxId: 1331910]}  ali model 3D-neighbors follow..  19................................................FEDTGTGLPVLLVHGFPLDRTMW-------KAQREELCDEFR-----VIVPDGESQVIPGVATMEAMADDLAGLCNH-----------------TGKIVLGGLSMGGYVAFAFARKYRDRLAGLILCDTRARPDSPEAKENRRRVAERVRREGPGFIAEEMIPRLCCESTFRNHPEVIEKIRQM........................................... 180
54 -11.200d3w06a_ c.69.1.0 (A:) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}  ali model 3D-neighbors follow..  13  1........................GVVEEAHNVKVIGSGE---------------ATIVLGHGFGTDQSVW-------KHLVPHLVDDYRV--VLYDNMGAGTTNPDYFDFDEGYSFDLIAILED----------------KIESCIFVGHSVSAMIGVLASLNRPDLFSKIVMISAS................................................................................................. 120
55 -11.100d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]}  ali model 3D-neighbors follow..  1.............................................PPKFFEAGERAVL-LLHGFTGNSA-------DVRMLGRFLESKG----YTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKN--------KGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYARERDHLDLIYAPTFVVQARHD----------EMINPDSANIIYNEIESPVKQIKWYEQSGHVITL-KDQLHEDIYAFLES 239
56 -11.100d2ocga_ c.69.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  10  16................................................YQQEGDHAVLLLPGMLGSGETDF-------GPQLKNLNKKL---TVVAWDPRGYGHSRPPDR----------DFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALIVHGEKDPLVFHADFIHKHVKGSR--------------LHLMPEGKHN-DEFNKLAEDFLQ..... 254
57 -11.100d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]}  ali model 3D-neighbors follow..  11  7.........................ESAALTLDGPVGPLDVAVDLPEP-DVAVQPVTAIVCHPLSTEGGSMHNK---VTMAARALRELG----ITVVRFNFRSVGTSAGSFDHGEQDDLRAVAE-----VRAQRPTDTL-------WLAGFSFGAYVSLRAAAALE---QVLISIAPPAGRWDFSDVQPPAQ---------------WLVIQGDAD-----------EIVDPQAVYDWLETLEQQPTLVRMPDTSHFFHRKLIDLRGALQHGVRR 212
58 -11.000d3wj1a_ c.69.1.0 (A:) automated matches {Sulfolobus shibatae [TaxId: 2286]}  ali model 3D-neighbors follow..  14  38...................PKAEVRKVEDIKIPGSETSINARVYFPKA---KGPYGVLVYLHGGG-----FVIGDVESYDPLCRAITNA--CNCVVVSVDYRLAP-----------EYKFPSVIDSFDATNWIYNNLDKFDGEMGIAIAGDSAGGNLAAVVALLSKG--GFFLTREHIEWFGSQYLRSPADLLDFRFSPIIAQDLSGLLIITAEYDPLRDQGEAYANRLLQAGVPVTSVRFNNVIHGFLSFFPLIDQGKDAIGLIGSVLRRTFYD 302
59 -10.900d3wj2a_ c.69.1.0 (A:) automated matches {Ferroplasma acidiphilum [TaxId: 74969]}  ali model 3D-neighbors follow..  41...................APVEIKEIKDYKIKLDGRTLNARMYDDNN-----AKSAILYYHGGG-----FLFGNIETYDNYCRFLAKE--SGVKIISIEYRLAP-----------EHKFPDFNDAYDSFHYIAKKKKDFGIEGRIGVAGDSAGANLAAALCLKCRDGKTEMPAVQVLFYPSLAPDNFSRSFIEYSDNYVLTGKMIRYFMVTNEYDPLRDPEETYVKKLREAGVRAVGIRGIGMIHGSATDFEVSDGARNIVKMVARIIPDYL.. 303
60 -10.900d3qvma_ c.69.1.0 (A:) automated matches {Oleispira antarctica [TaxId: 188908]}  ali model 3D-neighbors follow..  10  18.................................................ITGGGEKTVLLAHGFGCDQNMW-------RFMLPELEKQFT----VIVFDYVGSGQSDLESFSEGYAKDVEEILVA----------------DLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPS................................................................................................. 127
61 -10.700d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]}  ali model 3D-neighbors follow..  15................................................FDRVGKGPPVLLVAEEASRWPEALPEGYAF----------------YLLDLPGYGRTEGPRMAPEELAHFVAGFAVM----------------NLGAPWVLLRGLGLALGPHLEALGLRALPAEGVEVAE................................................................................................. 113
62 -10.700d4j7aa_ c.69.1.0 (A:) automated matches {Uncultured bacterium [TaxId: 77133]}  ali model 3D-neighbors follow..  10  73...................EPSNPVDVREETIKGRGGNEKLYIHSPTG-SDSDPLPCVVHTHGGG----------LTAADANYSRWRS-AATGLVVVGVEFRNAA-------GALGNHPFPALHDCADAAK--VASNREALGISTLIMSGESGGGNLSLATTMLAKKLDMKTMGAMVKPYDPTGENASNPLAWPYHASLEDLAGLPPHVISVNELDPLRDEGLAHYRKLLK----------AGVSTVGRTVHGTCHAA................. 328
63 -10.700d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]}  ali model 3D-neighbors follow..  15  1.....................................................................................................................................TALPAFNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGG-SITTPTANMKSWSGNQIASVANLGQRKIYMWTGSSDTTVNVMNQLKAQLGNFD--------NSANVSYVTTTGAVHTFPT............... 139
64 -10.600d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]}  ali model 3D-neighbors follow..  13  1......MVNAIRTPDQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAE--DVFLCLHGEPTWSYLY-------RKMIPVFAESG------VIAPDFFGFGKSDK-----------PVDEEDYTFEFHRNFLLALRLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACL................................................................................................ 151
65 -10.600d5uroa1 c.69.1.0 (A:1-335) automated matches {Hypocrea jecorina [TaxId: 431241]}  ali model 3D-neighbors follow..  13  19....................................QIRGKTYSYILGEPAGPKLETVVLVHGWPDMAFGW-------RHQIPYLMSLG------VVAPNGTDAPRDLSQFTKSVSADIAELARS-------------FVGQDGQIVLGGHDWGGAVVWRTAYYHPELVKAVFSVC................................................................................................... 140
66 -10.500d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]}  ali model 3D-neighbors follow..  13  83........................................INVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNG------TQVIQASD-DVIVFVTFNYRVG-----ALGFLASEKVRQNGDLNAGLLDQRKALRWVKQDPDHIVIHGVSAGAGSVAYHLSKDEGLFIGAIVESSFWPTQRTVSEMEFQFERFVNDTGCSSARDSL................................................................... 249
67 -10.500d3vvma_ c.69.1.0 (A:) automated matches {Streptomyces lavendulae [TaxId: 58340]}  ali model 3D-neighbors follow..  13  15..........................PDGFAMRRGGALYGARIYETFGSLNAARDNAVLVLTALSGDAHAASRPDDPTPGWWEAMVGPGKPDLWHVICVNGSTGPASTDPRTGEPYRLSFPELSIEDIADAAAHTVRALGISR--ACVVGASMGGMSALALLARHPELARTHISLSGA................................................................................................. 175
68 -10.500d4x00a_ c.69.1.0 (A:) automated matches {Burkholderia cenocepacia [TaxId: 216591]}  ali model 3D-neighbors follow..  10  1.....................................ARDYTVTAPDGVVGDPEGSPIIFIHGLLGSRLNW-----------SKQLQDPRLQHYRLITYDLRGHGLSGKP-GRRWADDLAAIIES----------------HARKPVLVGWSLGGAVISNYLAAYGDGIAGAVYVDGVIELKPDQIVAHPEVYRDMIASDLQTHLDGLLLLYGAQDALVKAKPSIARAKSLNPRIRSE-----------LYADSGHEPERFNRDLSDFVRMALSR 273
69 -10.400d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]}  ali model 3D-neighbors follow..  16  17................................................YEDHGTGQPVVLIHGFPLSGHSW-------ERQSAALLDAG------VITYDGQSSQPTTGYDYDTFAADLNTVLET----------------DLQDAVLVGFSTGTGEVAYVSSYGTARIAKVAFLASL................................................................................................. 125
70 -10.400d3pe6a_ c.69.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  14  1...................PRRTPQSIPYQDLPHLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEH-------SGRYEELARMLMGLD----LLVFAHDHVGHGQSEGERMHVFVRDVLQHVDSMQKDYPGLP-------------LLGHSMGGAIAILTAAERPGHFAGMVLISPLV................................................................................................ 143
71 -10.300d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]}  ali model 3D-neighbors follow..  5...............................YPPLAAYDSGWLDTGDGHRNPNGKPAVFI-HGGPGGGISP----------HHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMA-----------GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFT................................................................................................ 137
72 -10.300d4nmwa_ c.69.1.26 (A:) automated matches {Salmonella enterica [TaxId: 99287]}  ali model 3D-neighbors follow..  15  6.................................................TYGEGNCHLVLLHGWGLNAEVW-------HCIREELGSHFTL--HLVDLPGYGRSSGFGAMTLEEMTAQVA-------------------KNAPDQAIWLGWSLGGLVASQMALTHPERVQALVTVASS................................................................................................. 106
73 -10.300d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]}  ali model 3D-neighbors follow..  100........................................INVVRPPGTKAGANLPVMLWIFGGGFEIGS--PTIFPPAQMVTKSVLMGK--PIIHVAVNYRVA-----SWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADDPSKVTIFGESAGSMSVLCHLIWN----GDNTYKGKPLFRAGIMQSGAMVPSDPVDGTYGNEIYDLFVSSAGCGS-----ASDKLACLRSAS.......................................... 282
74 -10.200d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]}  ali model 3D-neighbors follow..  11  1.................SVQNVVLFDTQPLTLMLGGKLSYINVYQTYGTLNDEKNNAVLICHALTGDAEP--YFDDGRDGWWQNFMGAGLADRYFFISSNGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISH--KAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSS................................................................................................. 168
75 -10.000d4hs9a_ c.69.1.18 (A:) Lipase A {Proteus mirabilis [TaxId: 584]}  ali model 3D-neighbors follow..  24  2...................................................STKYPIV-LVHGLAGFSEIVGFPYFY--GIADALTQDG----HQVFTASLSAFNSNEVR-----GKQLWQFVQTILQ-----------ETQTKKVNFIGHSQGPLACRYVAANYPDSVASVTSING.................................................................................................. 104

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.