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Query: d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}, from SCOP207

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHGHGGEPARPEGVDSVRHERAGAVATAVEGDGLLQLHLRRPLWRLDDVLALYAPLRLDLVLVEGYKQERHPKVVLVRSEEDWASLQHLANIRAVIAWEPLEGPLAHPVFSLADDDEYIPWLMNEVRTRLast
1 -82.100d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}  ali model 3D-neighbors  100  1MNVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHGHGGEPARPEGVDSVRHERAGAVATAVEGDGLLQLHLRRPLWRLDDVLALYAPLRLDLVLVEGYKQERHPKVVLVRSEEDWASLQHLANIRAVIAWEPLEGPLAHPVFSLADDDEYIPWLMNEVRTR 165
2 -71.800d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  23  2IPLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDK-PGKDSYELRKAGAAQTIVASQQRWALMTETPDEDLQFLASRMDTSKLDLILVEGFKHEEIAKIVLFRDGAGHRPEELVIDRHVIAVASDVPLNLDVALLDINDVEGLADFVVEWMQKQ 168
3 -70.100d2f1ra1 c.37.1.0 (A:4-161) automated matches {Archaeoglobus fulgidus [TaxId: 2234]}  ali model 3D-neighbors follow..  24  1..ILSIVGTSDSGKTTLITRMMPILRERGLRVAVVKRHAHGDFEIDKEGKDSWKIYNSGADVVIASPVKLAFIRRVSEEENDLDWIYERYLSDYDLVITEGFSKAGKDRIVVVKKPEEVEHF-RQGRILAVVCDERVD---GHKWFRRDEVERIAEFILSLLR.. 158
4 -15.700d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}  ali model 3D-neighbors follow..  17  24..VLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHTLQWDVEWLTHQLFRQLKASHQLTLPFYDHETDTHSKRTVYLSDSDMIMIEG................................................................ 132
5 -14.800d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  9  1ARHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFGGRRIGFDVVTLSGTRGPLSRVGLEPPPGKRECRVGQYVVDLTSLPVLRNADCSSGPGQRVCVIDLFIQAVRQTLSTPGTIILGTIPVPKGKPLALVEEIRNRKDVKVFNVTKENRNHLLPDIVTCVQS. 186
6 -14.100d1nksa_ c.37.1.1 (A:) Adenylate kinase {Sulfolobus acidocaldarius [TaxId: 2285]}  ali model 3D-neighbors follow..  13  1MKIGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLSVEK---------QKKLQIDAAKGIAEEARAGGEGYLFIDTHAVIRTPSGYLPGLPSYVITEINPSVIFLLEADPKI............................ 128
7 -13.900d4ixna1 c.37.1.10 (A:1-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  12  4IAVTLLTGFLGAGKTTLLRHILN--EQHGYKIAVIANEFGEVSVDDGDRATQIKTLTNGCIAASRSNELEDALLDLLDNLDKGN-------IQFDRLVIEGM-ADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKT... 160
8 -13.800d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}  ali model 3D-neighbors follow..  12  6..IISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAFTFSHFSYEANEVFREYGETGQGRTRTYVHDDAEAARTGVAPGNFTDWRDFDSDSHLLFYEGLHGAVVNSEVNIAGLADLKIGVVPVINLEWI................................. 162
9 -12.900d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  13  29..FIFFSGPQGSGKSFTSIQIYNHLMEKEKSIGYA-------------SIDDFYLTHEDQLKLNEQFKNNKLLQGRGLPGTHDMKLLQEVLNTIDIFILEGW............................................................... 157
10 -12.500d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}  ali model 3D-neighbors follow..  10  1MKII-ITGEPGVGKTTLVKKIVERLGKRGFWTEEVRDPETK-IITTEGKKKIFSSKFFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDRRKVIIIDGKMELFSKKFIMHDPNVNVVATIPIRDVHPLVKEIRRLPGAVLIELTPENRDVILEDILSLLER. 178
11 -12.500d1khta_ c.37.1.1 (A:) Adenylate kinase {Methanococcus voltae [TaxId: 2188]}  ali model 3D-neighbors follow..  12  2.KVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVS------------FGSVMFEVAKEENLVSDRDQMRKMDPETQKRIQKMAGRKIAEMAKESPVAVDTH............................................................... 90
12 -12.300d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}  ali model 3D-neighbors follow..  14  3...IIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKEWKNHKIIDMPGERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRELDIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIIPISAKFGDNIERLKNRIFEVIRER 184
13 -12.200d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}  ali model 3D-neighbors follow..  17  2..LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSV----AADIAAEALHGEHGDLASSVYAMATLFALDRAGAVHTIQ-GLCRGYDVVILDRYVASNA.......................................................... 101
14 -12.100d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  14  4..LIGVSGGTASGKSSVCAKIVQLLGQNEVQVVILSQDSFYRVLTSEQ-KGQFNFDHPDAFDNELILKTLKEITEGKTVQSHSRKEETVTVYPADVVLFEGILAFYSQEV....................................................... 127
15 -11.900d2qm8a_ c.37.1.10 (A:) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}  ali model 3D-neighbors follow..  17  54..RVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSILGDKTRMARLAIDRNAFIRPSPSSGTLGGVAAKTRETMLLCEAAGFDVILVE--------TVGVGQSETAVADLTDFFLVLMLPGAGDELQGIKKGIFELADMIAV........... 197
16 -11.800d4basa_ c.37.1.0 (A:) automated matches {Trypanosoma brucei [TaxId: 185431]}  ali model 3D-neighbors follow..  18  5...VVMCGLDNSGKTTIINQVKHITATVGYNVETFEKGRVAFTVFDMGGAKKFRYDNIDAVIFVVDSSDHLRLCVVKSE--------IQAMLKHEDIRRELPGGGRVP-FLFFANKMDAAGAKTAAELVEILDLTTLMGDHPFVIFASTGVHEGFSWLQETASRQ 175
17 -11.700d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}  ali model 3D-neighbors follow..  12  4.RMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGV................................................................................................................................... 36
18 -11.700d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}  ali model 3D-neighbors follow..  16  12..LWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLV-------------AADTQR---PAAREQLRLLGEKVGVDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSVARAF--DEKVGVTGLVLTKL... 159
19 -11.400d2yvua_ c.37.1.0 (A:) automated matches {Aeropyrum pernix [TaxId: 272557]}  ali model 3D-neighbors follow..  14  8..VVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLDRTTVSEGAGFTREERLRHLKRIAWIARLLARNGVIVICSFVSPYKQARNMVRRIVEEEGIPFLEIYVKASLEEVI--RDPKGLYKKALKGELENFTGITDPYEPPENPQLVLDTIEHNVSYLYSLVKAV 177
20 -11.200d1j2ia1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}  ali model 3D-neighbors follow..  18  3...ILMVGLDAAGKTTILYKLVTTIPTIGFNVETVEYKNISFTVWDVGGLDKIRFQNTQGLIFVVDSNDRERVNEARE----------------ELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRQATCATSGDGLYEGLDWLSNQLRNQ 163
21 -11.200d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}  ali model 3D-neighbors follow..  21  1MKLIFLSGVKRSGKDTTADFIMSNYSAVKYQLAPIKD................................................................................................................................ 38
22 -11.100d4gi7a_ c.37.1.6 (A:) automated matches {Klebsiella pneumoniae [TaxId: 507522]}  ali model 3D-neighbors follow..  13  83..IISIAGSVAVGKSTTARVLQALLSRWPEHRHVELITTDGFLHPNSVLKERGLMKKKGFPQSLKSGVPQATAPVYSHLIYDVIPDGDKTVAQPDILILEG................................................................ 193
23 -10.900d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}  ali model 3D-neighbors follow..  13  16...LVFLGLDNAGKTTLLHMLGQHVPTLHPTSEELTIAGMTFTTFDLGGHIQARLPAINGIVFLVDCADHERL--LESKEELDSLMTDETIANVPILILGN................................................................ 122
24 -10.800d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}  ali model 3D-neighbors follow..  12  5.NILLLSGHPGSGKSTIAEALANLPGVPKVHFHSYIKHGRIDPWLPQSHQQNRMIMQIAADVAGRYAKEGYFVILDGVVRPDWLPAFTALARPLHYIVLRTTAAEAIERCL--RGGDSLSDPLVVADLHSQFADLGAFEHHVLPVSGKD-TDQALQSAINALQSG 171
25 -10.800d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  17  3...VLFVGLCDSGKTLLFVRLRDTQTSITDSSAIYKNRGNSLTLIDLPGHESLRKSSARAVVFVVDSAAFQREVKDVAEFLYQ-------------VLIDSMALKNSPSLLIACNKQDIAMAKSAKLIQQQL................................. 133
26 -10.700d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Norway rat (Rattus norvegicus) [TaxId: 10116]}  ali model 3D-neighbors follow..  13  4..LIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVKTYKSFEF---------FLPDNEEGLKIRKQCALAALNDVRKFLSEEGGHVAVFDATNTTRERRAMIFNFGEQ............................................... 110
27 -10.600d2g0ta1 c.37.1.10 (A:1-338) Hypothetical protein TM0796 {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  21  157IKVVGVFGTDVVGKRTTAVQLWERALEKGIKAGFLATGQTGILIGADAGYVILKLEKTGKEIVFVEGQGALR-----HPAYGQVTLGLLYGSNPDVVFL----FPEIPKKPDFEEERRLETLSNAKVIGGVSLNG--GFETDLPVYDPDDLDEMLERAMVW.... 338
28 -10.600d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  13  4.PSIIIAGPQNSGKTSLLTLLTTDSVRPTVVSSAADYDGSGVTLVDFPGHVKLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFL--VDILSITESSCENGIDILIACNKSELFTARPPSKIKDALESE.............................. 139
29 -10.600d3iija1 c.37.1.1 (A:1-172) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  9  3LPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDELDNQMREGGVIVDYHGCDFFPERWF--------VFVLRTDTNVLYERLETRGYNEKKLTDNIQCEIFQVLYEEATASYKEEIVHQLEELENNVDQILKWIEQ. 165
30 -10.500d1zd9a1 c.37.1.8 (A:17-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}  ali model 3D-neighbors follow..  14  6...LTLVGLQYSGKTTFVNVI-DMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRCRGVSAIVYMVDAADQEKI--EASKNELHNLLDKPQLQGIPVLVLGN................................................................ 113
31 -10.400d2yhsa2 c.37.1.10 (A:285-495) automated matches {Escherichia coli K-12 [TaxId: 83333]}  ali model 3D-neighbors follow..  18  11..VILMVGVNGVGKTTTIGKLARQFEQQGKSVMLA-------------AGDTFR---AAAVEQLQVWGQRNNITGADSASVIFDAIQAAKARNIDVLIAD----------TAGRLQNKSHLMEELKKIVRVMK................................ 121
32 -10.200d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  12  8AIKVAIVGRPNVGKSTLFNAILNK-TTRDPVDDEVFIDGRKYVFVDTAGLRRKSRVEPRTVEKYSNYRVVDSI--EKADVVVIVLDATQGITRQDQRMAGLMERRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSNIDRMIDAMNLAYASY 184
33 -10.200d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  17  4...YFVTG-TEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGNSDALALQRNSSLQLTFAEPTSPHIISAQEGRPIESLVMSAGLRALDWVLVEGAGGWFTP---LSDTFTFADWVTQEQLPVILVVGVKL............................ 149
34 -10.200d3kb2a1 c.37.1.1 (A:2-165) automated matches {Bacillus subtilis [TaxId: 1423]}  ali model 3D-neighbors follow..  7  1.TLIILEGPDCCFKSTVAAKLSKELKYPIIKGSSFELAKSGNEKLFEHFNKLADEDNVIIDRFVYSNLVYAKKFKDYSILTERQLRFIEDKIKAKAKVV--YLHADPSVIKKRLRVRGDEYIEGKDIDSILELYREVMSNAGLHTYSWDSSDEIAKDIIFLVE.. 164
35 -10.100d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}  ali model 3D-neighbors follow..  15  1MRQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKADSTR-KEGYGGIRCVESGGPEPGVGCAGRGIITSINMLEQLGAYT-----DDLDYVFYD--IREGKAQEIYIVASGEMMALYAANNISKGIQKYAKSGGVRLGGIICNSRKV............ 186
36 -10.100d1ihua2 c.37.1.10 (A:308-583) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  10  21.GLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAASRIDPHEETERYRQHVLETKGKELDEAGKRLLEEDLRSPCTEEIAVFQAFSRVRFVVMDTLLLLDATGAYHREIAKKMGEKGHFTTPMMLLQDPERTKVLLVTLTPVLEAANLQADLER..... 209
37 -9.890d3enda_ c.37.1.0 (A:) automated matches {Rhodobacter sphaeroides [TaxId: 272943]}  ali model 3D-neighbors follow..  15  3.KVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDDVDFHPEELRPEDFVFEGFNGVMCVEAGGPAGTGCGGYVVGQTVKLLKQHHLLDDTDVVIFDVLGDVVCGGFAAPLQHADQAVVVTANDFDSIYAMNRI---AAVQAKSKNYKVRLAGCVANRSRAT 187
38 -9.860d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  14  7..FIAIVGRPNVGKSTLLNKLL------GQKISITS-----------RKAQTTRHRIVGIYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVILNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQNFLDIVPISAETGLNVDTIAAIVRKHL... 170
39 -9.840d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}  ali model 3D-neighbors follow..  9  3.KLYIITGPAGVGKSTTCKRLAAQLDNS-IEGDIINHMVVGGYRPPWESDELLNFLLAQNDVVL-------IAFPDEAEALAQTVQAKVDDVEIRFIILWTNREELLRRDA--LRKKDEQMGERCLELVEEFESKGIDERYFYNTSHLQ-PTNLNDIVKNLKTNP 171
40 -9.590d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}  ali model 3D-neighbors follow..  11  23LPEIALAGRSNVGKSSFINSLLARTSSKPGKTQTLNF-NDELHFVDVPG---------GFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLDVQMYEFLKYYGIPVIVIATKADKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKDEAWGAIKKMINR. 195
41 -9.540d4ac9a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}  ali model 3D-neighbors follow..  11  7..NLGIFGHIDHGKTTLSKVLLPESQKRGITIDIFKLENYRITLVDAPGHADLRAVVSAADIIDLA----VVDAKEGPKTQTGEHMLILDHFNIPIIVV-------ITKSDNAGTEEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDELKNLIITTLNN. 175
42 -9.480d2lkca1 c.37.1.0 (A:5-178) automated matches {Geobacillus stearothermophilus [TaxId: 1422]}  ali model 3D-neighbors follow..  18  5.PVVTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQHIG------------AYQVTVNDKKITFLDTPGHEAFTTMRARGAQVTDIVILVVAADDGVMINHAKAANVPIIVAINK.................................................. 112
43 -9.460d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}  ali model 3D-neighbors follow..  13  7AKTVAILGGESSGKSVLVNKLAAVFNWEYGREFVFEKLGGDEQAMQYSDYPQMALGHQRYIDYAVRHSHKIAFIDTD-GKAHPFLDSMIKEYPFDVTILKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLNEEEISELQN....................... 192
44 -9.460d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}  ali model 3D-neighbors follow..  8  3.KIILTIGCPGSGKSTWAREFIAKNPGF--------------------NRDDYRQSIMAHEERDEYKYTKKKEGIVTGMQFDTAKSILYGGDSVKGVIISDTNLNPERRLAWET-------FAKEYGWKVEHKVFDVPWTELVKRNSKRGTKAVPIDVLRSMYKS 142
45 -9.350d1u0ja1 c.37.1.20 (A:225-490) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}  ali model 3D-neighbors follow..  9  104.NTIWLFGPATTGKTNIAEAIAHTVPFYG----CVNWTNENFPFNDCVDKEGKMTAKVVESAKAILGGSKVRVDQKCKSSAQIDPTPVIVTSNTNMCAVIDGNSTTFEHQQPLQDR-------------MFKFELTRRLDHDFGKVTKQEVKDFFRWAKDHVVE. 255
46 -9.330d2iwra_ c.37.1.8 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  13  10...LGVLGDARSGKSSLIHRFLKTESEQYKKEMLVDGQTHLVLIREEAGAPDAKFSGWADAVIFVFSEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRISASSPRVVGDARARALCADMKRCSYYETCATYGL----------NVDRVFQEVAQKVVTL 170
47 -9.330d1e2da_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  13  5..LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSS-QKKSDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENPKPDLVLFRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSIEAVHEDIRV. 190
48 -9.260d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}  ali model 3D-neighbors follow..  23  6.INILITGTPGTGKTSMAEMIAAELDG.......................................................................................................................................... 31
49 -9.220d3hr7a_ c.37.1.0 (A:) automated matches {Helicobacter pylori [TaxId: 85962]}  ali model 3D-neighbors follow..  11  1MQHLVLIGFMGSGKSSLAQELGLALERVGLSVREI----------EELGEDNFRMFEKNLIDELKTLKTPHVIST-MHENLKGLGTTFYLKMDFETLIKRLNQKEREKRPLLNNLTQAKELFEKRQALYEKNASFIIDAR--------GGLNNSLKQVLQFI... 161
50 -9.220d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Methanobacterium thermoautotrophicum [TaxId: 145262]}  ali model 3D-neighbors follow..  18  6.PIVSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFLKKFSIRETLPG----LFFIDTPGHEAFTTLRKRGGALADLAILEGFKPQTQEALNILRMY-------RTPFVVAA.................................. 129
51 -9.180d3pr1a_ c.37.1.0 (A:) automated matches {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  11  22KGEVAFVGRSNVGKSSLLNALIAFVSKTPGKTRSINF-NSKYYFVDLPG---------GYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGDLMMVEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTISELLDLISTLLK.. 192
52 -9.150d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}  ali model 3D-neighbors follow..  15  7..FVAIVGKPNVGKSTLLNNLL------GVKVAPISP-----RPQTTRKRLRGILTEGRRQIVFVDTPGLHKPMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVAR................................................... 107
53 -9.140d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}  ali model 3D-neighbors follow..  13  34..AFLLGGQPGSGKTSLRSAIFEETQGNVIVI----------------DNDTFKQQHPNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEG................................................................ 116
54 -9.130d4edha_ c.37.1.0 (A:) automated matches {Pseudomonas aeruginosa, PA01 [TaxId: 208964]}  ali model 3D-neighbors follow..  17  4..FVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPG-------TPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIR--ALARGAVVLCDRFTDATY.......................................................... 101
55 -9.130d4v03a_ c.37.1.0 (A:) automated matches {Aquifex aeolicus [TaxId: 63363]}  ali model 3D-neighbors follow..  15  2.EVIVITGKGGVGKTTLTANIGTALAKLGKKVLLIDADIGLRNLDMILGEKALVKDKRGLSLWLLPANQRANKDVIDIEKWNKTVEEIKNSGNYDYILVDGIEKGFQ------------IAVSPADKALIVVNPEVS---------SIRDADRVIGLLES..... 162
56 -9.120d3w5ja1 c.37.1.0 (A:2-197) automated matches {Gallionella capsiferriformans [TaxId: 395494]}  ali model 3D-neighbors follow..  17  1.KRIALLGMPNTGKSTLFNRMTGGAARVGNWPGIT-------------ELLSGKILLGADMVEIIDLPGIYDLHGFSDDEQVVRHFLHDNVPDLALVILNATQIERQMSLLLQLKQLNMNIVVLLNMSDEAIDSRKMSELLQIPVFQLTGYQEALQAVTRALRYP 163
57 -9.100d1e8ca3 c.72.2.1 (A:104-337) UDP-N-acetylmuramyl tripeptide synthetase MurE {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  14  5LRLVGVTG--TNGKTTTTQLLAQWSQLLGEISAVMGTVGNGLLGKVIPTENTAGLVDQGATFCAMEVSSH-GLVQHRVAALKFAASVFTNLSRDHLDYHGDMEHYEAAKWLLYSEHHCGQAIINADD...................................... 139
58 -9.060d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  13  3...VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTDTCGVFDNPQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFLRKSTVDTILVANK.................................................. 118
59 -9.000d1yksa1 c.37.1.14 (A:187-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}  ali model 3D-neighbors follow..  9  6.MTTVLDFHPGAGKTRFLPQILAECARRRLRTLVLAPTRVVLSEMKEAFHGLDVKFHTQAFSAHGSGREVIDAMCH--ATLTYRMLEPTRVVNWEVIIMDEAHFLDPASIAARGWAAHRARANESATILMTAT................................ 136
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Damiano JS, Stehlik C, Pio F, Godzik A., Reed JC. CLAN, a novel human CED-4-like gene. Genomics. 2001 Jul;75(1-3):77-83.