| | | | | | . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . |
| # |
Score |
Template |
Links and tools | %id | First |
LGLRRAGVRKALHDPFEDGALVLYEPPAISAHDLIKADKEKLPVHVVVDPVLSKVLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPSSLVRNWYNEVGKWLGGRVQPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRLKNSDNQTYLALNSMNAQRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKRFEIPILKGRDADASDKDRAAGEQKLQELISIVNRCLIRR | Last |
| 1 | -115.000 | d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebrafish (Danio rerio) [TaxId: 7955]} |
ali model 3D-neighbors |
100 | 1 | LGLRRAGVRKALHDPFEDGALVLYEPPAISAHDLIKADKEKLPVHVVVDPVLSKVLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPSSLVRNWYNEVGKWLGGRVQPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRLKNSDNQTYLALNSMNAQRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKRFEIPILKGRDADASDKDRAAGEQKLQELISIVNRCLIRR |
298 |
| 2 | -66.200 | d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]} |
ali model 3D-neighbors follow.. |
28 | 2 | ............................................QLLEPYNIKANLRPYQIKGFSWM-----RFMNKLGFGICLADDMGLGKTLQTIAVFSDAKKENE-----LTPSLVICPLSVLKNWEEELSKFAPHLRFAVFHEDRSKIKLED--------------YDIILTTYAVLLRDTR-LKEVEWKYIVIDEAQNIKNPQTKIFKAVKELKSKYRIALTGTPIENKVDDLWSIMTFLNPGLLGSYSEFKSKFATPIKKGD------------NMAKEELKAIISPFILRR |
218 |
| 3 | -21.300 | d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]} |
ali model 3D-neighbors follow.. |
19 | 50 | ..................................IEFVDNAADPIPTPYFDAEISLRDYQEKALERWLV---------DKRGCIVLPTGSGKTHVAMAAINEL-----------TPTLIVVPTALAEQWKERLGIFGEEYVGEF--------------------GRIKELKPLTVSTYDSAYVNAEKLGN-RFMLLIFDEVHHL--PAESYVQIAQMSIAPFRLGLTATF.................................................................... |
205 |
| 4 | -21.100 | d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]} |
ali model 3D-neighbors follow.. |
12 | 113 | ......................................................EPHWYQKDAVFEGLV---------NRRRILNLPTSAGRSLIQALLARYYLENYE------GKILIIVPTALTTQMADDFVDYRLFSHAMIKKIGGGASKDDKY----------KNDAPVVVGTWQTVVKQPKEWFS-QFGMMMNDECHLAT-GKSISSIISGLNNCMFKFGLSGSLRDGKANIVGMFGEIFKP................................................... |
282 |
| 5 | -15.900 | d1yksa1 c.37.1.14 (A:187-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]} |
ali model 3D-neighbors follow.. |
15 | 3 | ............................................................................KKGMTTVLDFHPGAGKTRRFLQILAECARRR-------LRTLVLAPTRVV---LSEMKEAFHGLDVKFHTQAFSAHGSGREV--------------IDAMCHATLYRMLEPTRVVNWEVIIMDEAHFLDPASIAARGWAAHRARANEILMTATP.................................................................... |
137 |
| 6 | -13.800 | d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]} |
ali model 3D-neighbors follow.. |
14 | 11 | ........................................................RIYQEVIYA----------KCKETNCLIVLPTGLGKTLIAMMIAEYRLTKYG------GKVLMLAPTKLVLQHAESFRRLFNLPPEKIVALTGEKSPEER--------SKAWARAKVIVATPQTIENDLGRISLEDVSLIVFDEAHRAVGNYVFIAREYKRQAKNPLVILTASPGSTKIMEVINNLGIEHIEYRSENSPDVRPYVK.................................... |
200 |
| 7 | -12.800 | d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]} |
ali model 3D-neighbors follow.. |
17 | 79 | ..................................................SLPFKLTNAQKRAHQ---EIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAG--------QTAFMVPTSILIQHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNG---QIDVVIGTHALIQ---EDVHFKNLGLVIIDEQHRF--GVKQREALMNKGKMVDTLVMSATPIPRSMA---TVIDEMPP................................................... |
264 |
| 8 | -12.200 | d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]} |
ali model 3D-neighbors follow.. |
17 | 24 | .....................................................EELFPPQAEAVEKVFS---------GKNLLLAMPTAAGKTLLAEMAMVREAIKG-------GKSLYVVPLRALAGEKYESFKKWEKIGLRIGISTGDYESRDEHLGDC----------DIIVTTSEKADSLIRNRASKAVSCLVVDEIHLLDSEKEILVTKMRRMNKALRVIGLSATAPN----VTEIAEWLDADYYVS.............................................. |
199 |
| 9 | -11.900 | d1gkub1 c.37.1.16 (B:6-250) Helicase-like "domain" of reverse gyrase {Archaeoglobus fulgidus [TaxId: 2234]} |
ali model 3D-neighbors follow.. |
11 | 41 | .........................................................AIQKMWAKRILR---------KESFAATAPTGVGKTSFGLAMSLFLALKGK-------RCYVIFPTSLLVIQAAETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLRNFKIVITTTQFLSKHYRELGH--FDFIFVDDVDAILKASKNVDKLLHLLEARGCLMVSTATAKKGKKAE............................................................ |
216 |
| 10 | -11.600 | d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]} |
ali model 3D-neighbors follow.. |
16 | 12 | ..................................................................................HLHAPTGSGKSTKVPAAYAAQ-----------YKVLVLNPSVAA----------------TLGFGAYMSKAHGVDPNIRTGVRTITTGSPITYSTYGKFLADGGCSGG-AYDIIICDECHSTDATSILGIGTVLDQAETAGVLATATP.................................................................... |
136 |
| 11 | -10.600 | d2gk6a1 c.37.1.19 (A:295-324,A:416-702) Upf1 {Human (Homo sapiens) [TaxId: 9606]} |
ali model 3D-neighbors follow.. |
15 | 85 | .....................................................PDLNHSQVYAVKTVLQ------------SLIQGPPGTGKTVTSATIVYHLARQGN------GPVLVCAPSNIAVDQLTE--KIHQTGLKVVRLCAKSREAIDSPVSFLALERELLMNADVICCT--CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGA----KQLILVGDHCQ-----------------LG-----------PVVMCKKAAKAGLSQSLFERLVV............. |
306 |
| 12 | -10.500 | d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]} |
ali model 3D-neighbors follow.. |
17 | 58 | .........................................................PDQAQAIN---AVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNH-------KQVAVLVPTTLL---AQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIG--THKLLQSDVKFKDLGLLIVDEEHRF---GVRHKERIKAMRANVDILLTATPIPRTLN--MAMSGMRDLSIIAT.............................................. |
233 |
| 13 | -10.200 | d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]} |
ali model 3D-neighbors follow.. |
18 | 24 | .....................................................QQFRPGQEEIIDTVLS---------GRDCLVVMPTGGGKSLQIPALLLN------------GLTVVVSP--LISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIR----LLYIAPERLMLFLEHLAHWNPVLLAVDEGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQIS.............................................. |
206 |
| 14 | -9.950 | d2pl3a1 c.37.1.0 (A:47-278) automated matches {Human (Homo sapiens) [TaxId: 9606]} |
ali model 3D-neighbors follow.. |
13 | 18 | ...................................NVNEITRFSDFPLSKKTLKGLQEIQKQTIGLALQ---------GKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERINNI-------NILVCTPGRLLQHMDEFHATDLQMLVLDEADRILD-ADTMNAVIENLPKKRQTLLFSATQTKSVKDL............................................................ |
217 |
| 15 | -9.290 | d5y4za1 c.37.1.14 (A:178-481) automated matches {Zika virus (strain mr 766) [TaxId: 64320]} |
ali model 3D-neighbors follow.. |
14 | 1 | .....................................................................CFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVR------EAIKKRLRTVILAPTRVV---AAEMEEALRGLPVRYMTTAVNVTHSGTEI--------------VDLMCHATFSRLLQPIRVPNYNLNIMDEAHFTDPSSIAARGYISTRVEMGEIFMTATP.................................................................... |
142 |
| 16 | -9.260 | d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]} |
ali model 3D-neighbors follow.. |
14 | 12 | ........................................................................................GKGKTTAAFGTAARAVGHG-------KNVGVV--------------QFIKGTWPNGERNLLEPHGVEFQVMATGFTWETQNREADTAACMAVWQHGKRMLADPLLDMVVLDELTYMVAPLEEVISALNARPGHQTVIITGRGCHRDILDLADTVSELRP................................................... |
153 |
| 17 | -9.140 | d3iuya1 c.37.1.0 (A:213-439) automated matches {Human (Homo sapiens) [TaxId: 9606]} |
ali model 3D-neighbors follow.. |
13 | 55 | .............................................................................QGIDLIVVAQTGTGKTLSYLGFIHLDSQPISREQRNGPGMLVLTPTELALHVEAECSKYSYKGLKSICIYGGRNRNGQ--------IEDISKGVDIIIATPGRLNDLQMSVNLRSITYLVIDEADKMLD-EPQIRKILLDVRPDRQTVMTSATWPDTVRQL............................................................ |
214 |
