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Query: d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]}, from SCOP207

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDGLast
1 -76.900d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors  100  1MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDG 119
2 -65.100d4htla1 c.55.1.0 (A:1-119) automated matches {Listeria monocytogenes [TaxId: 169963]}  ali model 3D-neighbors follow..  23  1MKIAAFDIGGTALKMGVVLPHGEIILTKSAEISGSDG-DQILAEMKVFLAEN-TDVTGIAVSAPGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKG 117
3 -60.200d1woqa1 c.55.1.10 (A:11-139) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]}  ali model 3D-neighbors follow..  27  3.PLIGIDIGGTGIKGGIVDLKKGKLERFRVPTPQPATPESVAEAVALVVAELSARAAGSPVGVTFPGIIQHGVVHSAANVKSWLNTDIDALLTARLGRPVEVINDADAAGLAEARYGAG 127
4 -58.300d2hoea3 c.55.1.10 (A:72-199) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  21  5.YVLGIEVTRDEIAACLIDASMNILAHEAHPLPSQSDREETLNVMYRIIDRAKDKLSALTVAAPGPIDTERGIIIDPRNFP-LSQIPLANLLKEKYGIEVWVENDADMGAVGEKWYTK. 127
5 -57.700d3bp8a2 c.55.1.10 (A:82-210) Mlc protein {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  18  5.HYLSLRISRGEIFLALRDLSSKLVVEESQELAL-KDDSPLLDRIISHIDQFLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGAS 128
6 -56.300d2ap1a2 c.55.1.10 (A:1-117) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]}  ali model 3D-neighbors follow..  23  2..YYGFDIGGTKIALGVFDSTRRLQWEKRVPTPHT-SYSAFLDAVCELVEEADQRKGSVGIGIPGMPETEDGTLYAA-NVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAW.... 115
7 -55.600d2gupa1 c.55.1.10 (A:1-114) Hypothetical protein SP2142 {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}  ali model 3D-neighbors follow..  26  1MTIATIDIGGTGIKFASLTPDGKILDKTSISTP--ENLEDLLAWLDQRLSE--QDYSGIAMSVPGAVNQETGVIDGFSAVPYIHGFSWYEALSS-YQLPVHLENDANCVGLSELLAHP. 113
8 -53.700d3epqa1 c.55.1.10 (A:1-118) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]}  ali model 3D-neighbors follow..  25  2..LGGIEAGGTKFVCAVGREDGTIIDRIEFPTKMPDETIEKVIQYFS-----QFSLQAIGIGSFGPVDNDKTSTITATPKAGWRHYPFLQTVKNEMKIPVGFSTDVNAAALGEFLFGEA 117
9 -53.300d1z05a3 c.55.1.10 (A:81-208) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]}  ali model 3D-neighbors follow..  17  5.QFLSMRLGRGYLTIALHELGGEVLIDTKIDIH-EIDQDDVLARLLFEIEEFFQRVTSIAITLPGLVNSEQGIVLQMPHY-NVKNLALGPEIYKATGLPVFVANDTRAWALAEKLFGHS 127
10 -21.000d1sz2a2 c.55.1.7 (A:3-111) Glucokinase Glk {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  17  2.YALVGDVGGTNARLALCDIASGEISQAK--TYSGLDYPSLEAVIRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHT----WA----IAEMKKNLGFSLEIINDFTAVSMA....... 105
11 -19.500d1zbsa2 c.55.1.5 (A:1-107) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]}  ali model 3D-neighbors follow..  15  2..ILIGDSGSTKTDWCIAKEGKSLGRFQTSGINRNEIDTALRSEVLPAIGQKASSIRAVYFYGAGCTPAKAPM--------------LNEALDSMLCDRIEVAGDMLGAARA....... 104
12 -19.200d3bexa1 c.55.1.13 (A:1-118) Type III pantothenate kinase, CoaX {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  16  2..YLLVDVGNTHSVFSITE-DGKTFRRWRLSTGVFQTEDELFSHLHPLLGDAMREIKGIGVAVPTQNTVIERFSQKYFHISPIWVKAKNGCVKWNVKNPSEVGADRVANVVAFVEYG.. 118
13 -18.200d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  10  3AIYGGVEGGGTRSEVLLVSEDGKILAEADGLNHWLIGTDKCVERINEMVNRAKRKLRSLGLSLSGGDQEDAGRILI----------EELRDRFPYLSESYLITTDAAGSIAT....... 114
14 -17.100d1vhxa1 c.55.3.8 (A:2-138) Hypothetical protein YrrK (RuvX) {Bacillus subtilis [TaxId: 1423]}  ali model 3D-neighbors follow..  17  1.RILGLDLGTKTLGVALSDEMGWTAQGIETIKINEAEGDYGLSRLSELIKD--YTIDKIVLGFPKNMNGTVGPRGEASQ-------TFAKVLETTYNVPVVLWDERLTTMAAE...... 103
15 -16.800d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]}  ali model 3D-neighbors follow..  15  5.YLIGVDGGGTGTRIRLHASDGTPLAMAE-ASALSQGIAKSWQAVLSTLEAA--------FQQAGLPAAPASACAIGLGLSGVHNRQWAGEFESQAPARLSLATDGYTTLLG....... 110
16 -14.400d3djca1 c.55.1.0 (A:2-122) automated matches {Legionella pneumophila [TaxId: 272624]}  ali model 3D-neighbors follow..  17  1..ILCIDVGNSHIYGGVFD-GDEIKLRFRHTSKVSTSDELGIFLKSVLRENNCSPETIRKIAICSVVPQVDYSLRSACV-PFLLQAGVKTGLNIKYRNPVEVGADRIANAIAATHSFPN 121
17 -13.700d1nu0a_ c.55.3.8 (A:) Hypothetical protein YqgF (RuvX) {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  9  3GTLMAFDFGTKSIGVAVGQRITGTAR--PLPAIKAQDGTPDWNIIERLLKEW--QPDEIIVGLPLNMDGTEQPLTARAR-------KFANRIHGRFGVEVKLHDERLSTVEAR...... 104
18 -13.200d1iv0a_ c.55.3.8 (A:) Hypothetical protein, YqgF homologue {Thermus thermophilus [TaxId: 274]}  ali model 3D-neighbors follow..  15  1MRVGALDVGEARIGLAVGEEGVPLAS--GRGYLVRKTLEEDVEALLDFVRR--EGLGKLVVGLPLRTDLKESAQAGKVL-------PLVEALRA-RGVEVELWDE.............. 93
19 -12.900d2f9wa2 c.55.1.13 (A:1-114) Type III pantothenate kinase, CoaX {Pseudomonas aeruginosa [TaxId: 287]}  ali model 3D-neighbors follow..  11  2..ILELDCGNSLIKWRVIEGAARSVAGG-----LAESDDALVEQLTSQQALPVRACRLVSVRSEQETSQLVARLEQLFPVS--SSGKQLAGVRNGYLDYQRLGLDRWLALVAAH..... 110
20 -12.100d3f9ma1 c.55.1.0 (A:12-218) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  14  63..FLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSDYISECISDFLDKHQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKLRDAIKRRGDFEMAMVNDTVATMIS....... 201
21 -11.600d3smpa1 c.55.1.14 (A:233-381) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  8  4FPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYMHRFIQMGSEKNFSSLHTTLCATG-------------------AFKFEEDFRMIADLQLHKLDELDCLIQG....... 138
22 -11.600d2w40a1 c.55.1.0 (A:1-254) automated matches {Plasmodium falciparum [TaxId: 36329]}  ali model 3D-neighbors follow..  12  3.VILSIDQSTQSTKVFFYDEELNIVHSNNLNHEQKCLKTNLYNLMNEGIKVLKDKYTSVIIKCIGITNQRETVIIWDRI----TGKPLYNAI---------VWLDTRVEELVT...... 113
23 -11.100d3ezwa1 c.55.1.4 (A:3-253) Glycerol kinase {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  18  3.YIVALDQGTTSSRAVVMDHDANIISVSQREFEVEHDPMEIWATQSSTLVEVLAKISSDQIAAIGITNQRETTIV----------------WEKETGKPIIVWQCRRTAEICE...... 111
24 -10.300d1saza1 c.55.1.2 (A:1-172) butyrate kinase 2 {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  10  2FRILTINPGSTSTKLSIFEDERMVKMQNSHSPDELGRFQKILDQLEFREKIARQFVEETGYSLSSFSAFVSRGGLLDPIPGG--VYLVDGLMIKTLKSGKNGEHASNLGAI........ 111
25 -10.100d3o4wa1 c.55.1.0 (A:2-223) automated matches {Milk yeast (Kluyveromyces lactis) [TaxId: 28985]}  ali model 3D-neighbors follow..  18  81..FLALDLGGTNLRVVLVKLGGNHDFDTTQNK-RTGTSEQLWSFIAKCLKEFVDEWYPLGFTFSYPASQNSGVLQR--DIEGVEGHDVVPMLQEQIEKLVALINDTTGTLVA....... 216
26 -9.520d4czga1 c.55.1.0 (A:9-149) automated matches {Caulobacter vibrioides [TaxId: 155892]}  ali model 3D-neighbors follow..  12  5...IAIDLGTANTLIYQKGKGIVLNEPSVVALRNVGGRKVVHAVGIEAKQMLGRTPGHMEAIRPGVIADPKVIVCVPSGATAVERRAINDSCLNAGARRVGLIDEPMAAAI-----GAG 141
27 -9.480d5jica1 c.55.1.14 (A:2-267) automated matches {Staphylococcus aureus [TaxId: 196620]}  ali model 3D-neighbors follow..  13  2...VGIDAGGTLIKIVQEQDNQRTFKTEL-----TKNIDQVVEWLNQ------QQIEKLCLTGGN-----------------------AGVIAENINIPAQIFVEFDAASQG....... 76
28 -9.290d3sdwa_ c.121.1.0 (A:) automated matches {Coccidioides immitis [TaxId: 246410]}  ali model 3D-neighbors follow..  14  7..AIACDDAGVSYKEALLSDNPLVSSITDVGVTSTTDKTAYPHVAIQAAQLIKDGKVDRALMICG---TGLGVAISANKVPGIRAVTAHDTFSVERAIL---SNDAQVLCFGQRVIGI. 119
29 -9.010d2zgya1 c.55.1.1 (A:1-157) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  14  2..LVFIDDGSTNIKLQWQESDGTI-KQHISPNSFKREWAVSFGDKKVFNYTLNGEQYSFDPISPDAVVTTNIAWQYSDVNVVAVHHALLTSVDIVCTLPLTEYYDRN............ 111
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 3 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.