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Query: d2c2aa1 a.30.2.1 (A:232-320) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]}, from SCOP207

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MENVTESKELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLLast
1 -63.600d2c2aa1 a.30.2.1 (A:232-320) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors  100  1MENVTESKELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSL 89
2 -17.200d5b1na_ a.30.2.1 (A:) automated matches {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  28  4...................RTLLMAGVSHDLRTPLTRIRLATEMM--------SEQDGYLAESINKDIEECNAIIEQFIDYLR...... 59
3 -8.250d2h8ga_ c.56.2.0 (A:) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}  ali model 3D-neighbors follow..  22  179.................DMEGAAVAYVADLLKIPVVFLKAVTDLV-----DGDKPTAEEFLQNLTVVTAALEGTATKVIN......... 236
4 -6.790d4oy3a1 c.56.2.0 (A:2-230) automated matches {Helicobacter pylori [TaxId: 85963]}  ali model 3D-neighbors follow..  14  172.................EMEGASVAFVCQKFGVPCCVLRSISNNA-------DEKAGMSFDEFLEKSAHTSAKFLKSMVD......... 227
5 -6.600d4f1wa_ c.56.2.1 (A:) automated matches {Salmonella enterica [TaxId: 904139]}  ali model 3D-neighbors follow..  17  172.................EMEATAIAHVCHNFNVPFVVVRAISDVA-------DQQSHLSFDEFLAVAAKQSTLMVETLVQ......... 227
6 -6.380d1d8ia_ d.63.1.1 (A:) mRNA triphosphatase CET1 {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  14  233........DITKVENHNQNSKSRQSETTHEVELEINT-----------------PALLNAFDNITNDSKEYASLIRTFLNNGTIIRRKL 296
7 -6.310d1t94a1 d.240.1.1 (A:411-515) DNA polymerase kappa {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  14  6MSVERTFSEINKAEEQYSLCQELCSELAQDLQK--ERLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELLK......... 83
8 -6.000d2c0ga1 a.71.1.0 (A:1146-1251) automated matches {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}  ali model 3D-neighbors follow..  5............IKEFNEVLKNYANIPDAEQLKLIEKLQAKQEQLTDPEQQQNARAYLIYMRFLEEETKRLLRLKAGKVTEAKKEE... 86
9 -5.930d1f44a1 a.60.9.1 (A:20-129) Cre recombinase {Bacteriophage P1 [TaxId: 10678]}  ali model 3D-neighbors follow..  11  5.........RKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKLNNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHR... 81
10 -5.790d2qklb_ a.242.1.1 (B:) mRNA decapping enzyme Dcp2p, N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}  ali model 3D-neighbors follow..  16  11...............LDDLSARFILNLPAEEQSSVERL--YEDFIRAQNDQLPSLGLRVFSAKLFAHCPLLWKWSKVHEEA........ 84

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 1 4 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30.