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Query: d2ouxa2 d.37.1.1 (A:136-262) Magnesium transporter MgtE {Enterococcus faecalis [TaxId: 1351]}, from SCOP207

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst ETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVNDDDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDEAASLast
1 -71.300d2ouxa2 d.37.1.1 (A:136-262) Magnesium transporter MgtE {Enterococcus faecalis [TaxId: 1351]}  ali model 3D-neighbors  100  1ETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVNDDDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDEAAS 127
2 -37.300d2yzqa2 d.37.1.1 (A:1-122) Uncharacterized protein PH1780 {Pyrococcus horikoshii [TaxId: 53953]}  ali model 3D-neighbors follow..  29  2.RVKTIMTQNPVTITLPATRNYALELFKK-----YKVRSFPVVNKEGKLVGIISVKRILVNPDEEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEK 122
3 -36.300d1vr9a3 d.37.1.1 (A:1-121) Hypothetical protein TM0892, CBS tandem {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  21  2.KVKKWVTQDFPMVEESATVRECLHRMRQ-----YQTNECIVKDREGHFRGVVNKEDLLDLDLDSSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIE.... 118
4 -35.400d5ks7a_ d.37.1.0 (A:) automated matches {Listeria monocytogenes [TaxId: 1639]}  ali model 3D-neighbors follow..  31  4.QVAQIMNTNPVSITADKSLQAAITVMKE-----KRVDTLLVVDEGNVLKGFIDVEQIDLNRTATSVMDIIEKNVFYVYEDTLLRDTVQRILKRGYKYIPVVDKDKRLVGIVTRASLVDIVYDS... 122
5 -32.100d2yzqa1 d.37.1.1 (A:123-278) Uncharacterized protein PH1780 {Pyrococcus horikoshii [TaxId: 53953]}  ali model 3D-neighbors follow..  20  5.EIEPYYQRYVSIVWEGTPLKAALKALLL-----SNSMALPVVDSEGNLVGIVDETDLLRD-PNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVL...... 155
6 -32.000d3kpba_ d.37.1.0 (A:) automated matches {Methanocaldococcus jannaschii [TaxId: 2190]}  ali model 3D-neighbors follow..  25  2.LVKDILSKPPITAHSNISIMEAAKILIK-----HNINHLPIVDEHGKLVGIITSWDIALAQNKKTIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLF...... 118
7 -31.500d3ddja1 d.37.1.1 (A:136-276) Uncharacterized protein SSO3205 {Sulfolobus solfataricus [TaxId: 2287]}  ali model 3D-neighbors follow..  13  3.PVKVFMSTKVQTIYKEVRLDQAVKLMLR-----RGFRRLPVIDDDNKVVGIVTVVNAIKQ-YGKVVKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHH.... 131
8 -30.800d3sl7a1 d.37.1.0 (A:76-232) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}  ali model 3D-neighbors follow..  25  3.TVGDFMTQNLHVVKPSTSVDDALELLVE-----KKVTGLPVIDDNWTLVGVVSDYDLLALDSGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQ.... 154
9 -30.200d1pvma4 d.37.1.1 (A:1-142) Hypothetical protein Ta0289 {Thermoplasma acidophilum [TaxId: 2303]}  ali model 3D-neighbors follow..  23  4.RVEKIMNSNFKTVNWNTTVFDAVKIMNE-----NHLYGLVVKDDNGNDVGLLSERSIIKRPDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSRASIT 131
10 -30.000d2o16a3 d.37.1.1 (A:20-158) Hypothetical protein VC0737 {Vibrio cholerae [TaxId: 666]}  ali model 3D-neighbors follow..  22  3.KVEDMMTRHPHTLLRTHTLNDAKHLMEA-----LDIRHVPIVDANKKLLGIVSQRDLLAAQEETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA-KDVLVGIITDSDFVTIAIN.... 132
11 -29.800d2p9ma_ d.37.1.0 (A:) automated matches {Methanocaldococcus jannaschii [TaxId: 243232]}  ali model 3D-neighbors follow..  22  5.KVKDVMTKNVITAKRHEGVVEAFEKMLK-----YKISSLPVIDDENKVIGIVTTTDIGYNTLETTIGDVMTKDVITIHEDASILEAIKKMKEEIINQLPVVDKNNKLVGIISDGDIIRTISK.... 132
12 -29.700d3ddja2 d.37.1.1 (A:1-135) Uncharacterized protein SSO3205 {Sulfolobus solfataricus [TaxId: 2287]}  ali model 3D-neighbors follow..  19  2.NIETLMIKNPPILSKEDRLGSAFKKINEGG-----IGRIIVAN--EKIEGLLTTRDLLST-STTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKD.... 132
13 -29.600d1o50a3 d.37.1.1 (A:1-145) Hypothetical protein TM0935 {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  13  5.DVCKLISLKPTVVEEDTPIEEIVDRILE-----DPVTRTVYVARDNKLVGMIPVMHLLKVSGAKNASEIM-LDPVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWKGREK 145
14 -28.300d1zfja4 d.37.1.1 (A:95-220) Type II inosine monophosphate dehydrogenase CBS domains {Streptococcus pyogenes [TaxId: 1314]}  ali model 3D-neighbors follow..  22  1....NGVIIDPFFLTPEHKVSEAEELMQRYR-----ISGVPIVETNRKLVGIITNRDMRFISDAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAA 122
15 -28.000d2yzia1 d.37.1.1 (A:4-135) Uncharacterized protein PH0107 {Pyrococcus horikoshii [TaxId: 53953]}  ali model 3D-neighbors follow..  14  6.PIKVYMTKKLLGVKPSTSVQEASRLMME-----FDVGSLVVINDDGNVVGFFTKSDIIRRPYDIPVERIMTRNLITANVNTPLGEVLRKMAEHRIKHILIEE-EGKIVGIFTLSDLLEASRRRLET 131
16 -27.700d1y5ha3 d.37.1.1 (A:2-124) Hypothetical protein Rv2626c {Mycobacterium tuberculosis [TaxId: 1773]}  ali model 3D-neighbors follow..  18  2.TARDIMNAGVTCVGEHETLTAAAQYMRE-----HDIGALPICGDDDRLHGMLTDRDIVIKPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVIS-EHRLVGIVTEADIARHL...... 122
17 -27.500d2ef7a1 d.37.1.1 (A:1-127) Uncharacterized protein ST2348 {Sulfolobus tokodaii [TaxId: 111955]}  ali model 3D-neighbors follow..  23  5.IVKEYMKTQVISVTKDAKLNDIAKVMTE-----KNIGSVIVVDG-NKPVGIITERDIVKASLETKAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDM... 126
18 -26.300d3ctua1 d.37.1.0 (A:1-143) automated matches {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}  ali model 3D-neighbors follow..  22  19.....TPAKNLAVLIDTHNADHATLLLSQMT-----YTRVPVVTDEKQFVGTIGLRDIMAY-ADTDIVHMTKTDVAVVSPDFTITEVLHKLVDESF--LPVVDAEGIFQGIITRKSILKAVNA.... 139
19 -26.200d3lqna_ d.37.1.0 (A:) automated matches {Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]}  ali model 3D-neighbors follow..  15  15.....ISSEKVAHVQIGNGLEHALLVLVKSG-----YSAIPVLDPMYKLHGLISTAMILDG-EEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKK... 137
20 -25.900d1b3ob4 d.37.1.1 (B:112-231) Type II inosine monophosphate dehydrogenase CBS domains {Human (Homo sapiens), type II [TaxId: 9606]}  ali model 3D-neighbors follow..  17  1....QGFITDPVVLSPKDRVRDVFEAKARHG-----FCGIPITDTGSRLVGIISSRDIDFLKEELEEIMTKREDLVVAPAGITLKEANEILQRSKKGKLPIVNEDDELVAIIARTDLK......... 117
21 -25.500d2nyca1 d.37.1.1 (A:181-320) Nuclear protein SNF4 {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  18  10.DLNIITQDNMKSCQMTTPVIDVIQMLTQ-----GRVSSVPIIDENGYLINVYEAYDVLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYI...... 137
22 -24.900d2riha_ d.37.1.1 (A:) Uncharacterized protein PAE2072 {Pyrobaculum aerophilum [TaxId: 13773]}  ali model 3D-neighbors follow..  19  2.RTSELLKRPPVSLPETATIREVATELAK-----NRVGLAVLTDNPKRPVAVVSERDILRADLDGPAMPIA-NSPITVLDTDPVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERAILLE. 127
23 -24.600d3fhma1 d.37.1.0 (A:1-130) automated matches {Agrobacterium tumefaciens [TaxId: 176299]}  ali model 3D-neighbors follow..  17  13.......GRDVVTVGPDVSIGEAAGTLHA-----HKIGAVVVTDADGVVLGIFTERDLVAASLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEE-NGRLAGIISIGDVVKARIGE... 130
24 -23.700d2uv4a1 d.37.1.0 (A:182-324) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  21........ANIAMVRTTTPVYVALGIFVQ-----HRVSALPVVDEKGRVVDIYSKFDVISVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL...... 141
25 -23.600d1pbja3 d.37.1.1 (A:2-121) Hypothetical protein MTH1622 {Methanobacterium thermoautotrophicum [TaxId: 145262]}  ali model 3D-neighbors follow..  14  2..VEDVMVTDVDTIDITASLEDVLRNYVENAKGS------SVVVKEGVRVGIVTTWDVLEALAEVKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEE-DDEIIGVISATDILRAK...... 119
26 -23.600d3fv6a_ d.37.1.0 (A:) automated matches {Bacillus subtilis [TaxId: 1423]}  ali model 3D-neighbors follow..  21  12.QVKDFQSIP-VVIHENVSVYDAICTMFL-----EDVGTLFVVDRDAVLVGVLSRKDLLRALTSVPVHIIMTRNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDEVIGRVTKTNMTKILVSLSEN 142
27 -21.600d4o9ka_ d.37.1.0 (A:) automated matches {Methylococcus capsulatus [TaxId: 243233]}  ali model 3D-neighbors follow..  18  7.FVRDIMHTDTPVIGLEASVRDALLEMTA-----KKLGMTAIVDGAGTIQGVFTDGDLRRL-HATPITAVMTRSCVTVEGSLLAAEAVRIMEQKRINALPVVE-NGRLIGAINMHDLL......... 125
28 -21.200d2rc3a1 d.37.1.1 (A:23-149) Uncharacterized protein NE2398 {Nitrosomonas europaea [TaxId: 915]}  ali model 3D-neighbors follow..  23  14.........TVVAIGPDDSVFNAMQKMAA-----DNIGALLVMKD-EKLVGILTERDFSKPVKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLV......... 122
29 -21.000d2j9la1 d.37.1.1 (A:578-746) Chloride channel protein 5, ClC-5 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  22  10.KPRRNDPLLTVLTQDSMTVEDVETIISETTYS----FPVVVSRESQRLVGFVLRRDLIISPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQMANQ 161
30 -21.000d2d4za3 d.37.1.1 (A:527-606,A:691-770) Chloride channel protein, CBS tandem {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}  ali model 3D-neighbors follow..  17  12.QVGDIMVRDVTSIASTSTYGDLLHVLRQ-----TKLKFFPFVDTPDTNTLLGSIDRTEVNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIE..... 160
31 -19.100d2v8qe2 d.37.1.1 (E:23-181) 5`-AMP-activated protein kinase subunit gamma-1, AMPKg {Norway rat (Rattus norvegicus) [TaxId: 10116]}  ali model 3D-neighbors follow..  14  14.RCYDLIPTKLVVFDTSLQVKKAFFALVTNG-----VRAAPLWDKKQSFVGMLTITDFIIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDESGNTLYILTHKRILKFLKLFITE 159
32 -18.800d2qrde1 d.37.1.1 (E:3-181) automated matches {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}  ali model 3D-neighbors follow..  15  21.TSYDVLPTSLIVFDVTLFVKTSLSLLTLNN-----IVSAPLWDEANKFAGLLTMADFVNVREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDEMIVSVLTQYRILKFISMNCKE 174
33 -10.000d2dlxa1 c.47.1.24 (A:8-147) UBX domain-containing protein 7 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  13  9........ADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQCLN-RDVW---SNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPILDPRTVEWHQLDVSSFLDQVTG.... 126
34 -9.740d2kuca1 c.47.1.0 (A:1-119) automated matches {Bacteroides thetaiotaomicron [TaxId: 818]}  ali model 3D-neighbors follow..  15  48..............................................................KDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPFINSSGEVVGAEDAPELLKKVKLGVES 119
35 -9.540d2lsta1 c.47.1.0 (A:4-122) automated matches {Thermus thermophilus [TaxId: 262724]}  ali model 3D-neighbors follow..  15  40..............................................................SDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFEEVGRLFGSRPRAEFLKELRQVCVK 114
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 5 1 8   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Lukasz Jaroszewski, Zhanwen Li, S. Sri Krishna, Constantina Bakolitsa, John Wooley, Ashley M. Deacon, Ian A. Wilson, Adam Godzik, Exploration of Uncharted Regions of the Protein Universe. Plos Biology. 2009 Sep. 7(9):e1000205