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Query: d2pspa2 g.16.1.1 (A:54-106) Pancreatic spasmolytic polypeptide {Pig (Sus scrofa) [TaxId: 9823]}, from SCOP207

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50
# Score Template Links and tools%idFirst ESEECVMQVSARKNCGYPGISPEDCAARNCCFSDTIPEVPWCFFPMSVEDCHYLast
1 -34.000d2pspa2 g.16.1.1 (A:54-106) Pancreatic spasmolytic polypeptide {Pig (Sus scrofa) [TaxId: 9823]}  ali model 3D-neighbors  100  1ESEECVMQVSARKNCGYPGISPEDCAARNCCFSDTIPEVPWCFFPMSVEDCHY 53
2 -28.500d2pspa1 g.16.1.1 (A:1-53) Pancreatic spasmolytic polypeptide {Pig (Sus scrofa) [TaxId: 9823]}  ali model 3D-neighbors follow..  36  5ACRCSRQDPKNRVNCGFPGITSDQCFTSGCCFDSQVPGVPWCFKPLPAQ.... 53
3 -17.600d2qmja1 b.30.5.11 (A:7-269) N-terminal subunit of Maltase-glucoamylase (NtMGAM), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  23  1......VNELERINCIPQPPTKATCDQRGCCWNPQGASVPWCYYSKNHSYHV. 48
4 -5.800d1iarb1 b.1.2.1 (B:1-96) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  19  5QEPTCVSDYMSISTCEWKMNGPTNCEAHTCIPENNGGAGCVCHLLMD...... 66
5 -5.050d1w6sb_ a.137.2.1 (B:) Methanol dehydrogenase, light chain {Methylobacterium extorquens [TaxId: 408]}  ali model 3D-neighbors follow..  24  4......................TKCKAAGNCWEPKPG------FPEKIAGSKY 28
6 -4.960d1l6pa_ b.1.17.1 (A:) Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  12  76DRLTLPVTINQASAGATLTVTYQGCADAGFCYPPETKTVP............. 115
7 -4.860d5ufta1 d.224.1.0 (A:1-143) automated matches {Brucella abortus [TaxId: 359391]}  ali model 3D-neighbors follow..  12  33HSKLCGSTVTVYLKMRDGVVTDFAHEVKACALGQASSSV.............. 71
8 -4.720d1bgca_ a.26.1.1 (A:) Granulocyte-colony stimulating factor (G-CSF) {Cow (Bos taurus) [TaxId: 9913]}  ali model 3D-neighbors follow..  7  44.RHSLGIPQAPLSSCSSQSLQLRGCLNQ......................... 70
9 -4.640d2k9fb1 b.1.17.1 (B:2-128) Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) {Neisseria meningitidis [TaxId: 491]}  ali model 3D-neighbors follow..  14  96...................LTYQGSAEAGVCYPPVDTEFD............. 116
10 -4.610d3coqa1 g.38.1.1 (A:8-48) Gal4 {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  17  1.EQACDICRLKKLKCSKEKPKCAKCLKNNCRYSPKTKRSP............. 41
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.