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Query: d2y71a_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Mycobacterium tuberculosis [TaxId: 1773]}, from SCOP207

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140
# Score Template Links and tools%idFirst LIVNVINGPNLGRLGRREPAVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPIATGVIVGLGIQGYLLALRYLAEHLast
1 -81.800d2y71a_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Mycobacterium tuberculosis [TaxId: 1773]}  ali model 3D-neighbors  100  1LIVNVINGPNLGRLGRREPAVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPIATGVIVGLGIQGYLLALRYLAEH 141
2 -72.400d2c4wa_ c.23.13.1 (A:) automated matches {Helicobacter pylori [TaxId: 210]}  ali model 3D-neighbors follow..  36  10MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQLDVELEFFQTNFEGEIIDKIQESVGEYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNI 153
3 -7.530d1tz9a1 c.1.15.6 (A:2-353) Mannonate dehydratase UxuA {Enterococcus faecalis (Streptococcus faecalis) [TaxId: 1351]}  ali model 3D-neighbors follow..  15  184.........................NLRYFLERVIPVCEEENIKMGIHPDDNLADLKRILSLVDSPANGITFCTGSLGADP--LPTMIREIGHRINFVHFRNVKYLGEHRFEETA------HPSVAGSLDMAELMQALVD. 306
4 -7.270d3up8a1 c.1.7.0 (A:1-275) automated matches {Sinorhizobium meliloti [TaxId: 266834]}  ali model 3D-neighbors follow..  13  1MHAVSSNGANIPALGFGTFRMSGAEVLRILPQALKLGFRHVDTAQIY---GNEAEVGEAIQKSGIPRADVFLTT-RHDAFIASVDESLRKLRTDHVDLHWPGSDVPMAERIGALNEVRNAGKVRHIGISNFNTT....... 140
5 -7.230d2q4qa2 c.103.1.1 (A:2-122) Hypothetical protein PTD015 (C11orf67) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  13  53VKEVVEKGVQTLVIGR------GMSEALKVPSSTVEYLKKHGIDVRVLQTEQAVKEYNALVAQGVRVGGVFH..................................................................... 118
6 -7.070d5u8ja2 a.4.5.0 (A:85-171) automated matches {Enterobacter cloacae [TaxId: 550]}  ali model 3D-neighbors follow..  16  19ITTLLLRGAQPGELRTRASRMHEFADMQEVEQTLDGLATREDGPYVVRLAREPGK...................................................................................... 74
7 -6.710d2nwqa_ c.2.1.0 (A:) automated matches {Pseudomonas aeruginosa [TaxId: 287]}  ali model 3D-neighbors follow..  14  2.STLFITGATSG-FGEACARRFAEARLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLR-GLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVA........... 140
8 -6.640d3ntxa_ c.88.1.1 (A:) automated matches {Yersinia pestis [TaxId: 214092]}  ali model 3D-neighbors follow..  15  4.SIYVAYGGTIGMQRSDNGYIPVSGHLQRQLALMPEFHRPEMPDFTIHEYAPL-HIANDIQQNYDLYDGFVILHGTMAFTASALSFMLENLAKPVI............................................. 112
9 -6.250d4hgxa_ c.1.15.4 (A:) Putative cytoplasmic protein STM4435 {Salmonella typhimurium [TaxId: 90371]}  ali model 3D-neighbors follow..  10  96.....VGARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPLGFRVSSLQLIREAGSPFKVLLDTFHHHLYEEAEKEFASRIDISAIGLVHLSGVEDTRP---TEALADEQRIMLSEKDVMQNYQQVQRLEN. 234
10 -6.230d5jlaa_ c.2.1.0 (A:) automated matches {Burkholderia xenovorans [TaxId: 266265]}  ali model 3D-neighbors follow..  14  8.AIAVVTGAGSGILSRSGANVIVADRDIEAATRVARATGGKTLVLDVGEDASVTAAANEVRARYGVAD-VLVNCAGVLQRTLPPGELAQREWDVVSRIDLRGTYPMADRRRGSIVNIASVAGMRSGPLHAYGPAKAGVIS. 160

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.