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Query: d2z76a_ d.17.4.3 (A:) Hypothetical protein Rv0760c {Mycobacterium tuberculosis H37Rv [TaxId: 83332]}, from SCOP207

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130
# Score Template Links and tools%idFirst QSPALIASQSSWRCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAANRLTVTCEETFPSSSPDEIAHILVLHSEFDGGFTSEVRGVFTYRVNKAGLITNMRGYWNLDMMTFGLast
1 -76.100d2z76a_ d.17.4.3 (A:) Hypothetical protein Rv0760c {Mycobacterium tuberculosis H37Rv [TaxId: 83332]}  ali model 3D-neighbors  100  1QSPALIASQSSWRCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAANRLTVTCEETFPSSSPDEIAHILVLHSEFDGGFTSEVRGVFTYRVNKAGLITNMRGYWNLDMMTFG 131
2 -57.300d1oh0a_ d.17.4.3 (A:) Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI {Pseudomonas putida [TaxId: 303]}  ali model 3D-neighbors follow..  19  4AQEVQGLMARYIELVDVGDIEAIVQMYADDATVEDPFGQPP-------IHGREQIAAFYRQGLGGGK-VRACLTGPVRASHNGCGAMPFRVEMVWNGQPCALDVIDVMRFDEHGRIQTMQAYWSEVNLSV. 125
3 -56.800d5cxoa1 d.17.4.0 (A:1-128) automated matches {Streptomyces albus [TaxId: 1888]}  ali model 3D-neighbors follow..  18  4EQKRKEIVAEYFRKVNEGDVDAIVEMFTENATIEDPVGKDV-------REGRAAQREYFNSNVTAEV-TIEPGHLSAGQDGKSVAVALAAEMTDPNRTRVKINAVDVFTLTPEGKIDSMRVFWGMTDIGV. 128
4 -54.500d1ohpa_ d.17.4.3 (A:) Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI {Comamonas testosteroni, also known as Pseudomonas testosteroni [TaxId: 285]}  ali model 3D-neighbors follow..  22  4PEHMTAVVQRYVAALNAGDLDGIVALFADDATVENPVGSEP-------RSGTAAIREFYANSLKLPLAV----TQEVRAVANEAAFAFIVSFE-YQGRKTVVAPIDHFRFNGAGKVVSMRALFGEKNIHAG 124
5 -53.000d3rgaa1 d.17.4.0 (A:1-133) automated matches {Streptomyces lasaliensis [TaxId: 324833]}  ali model 3D-neighbors follow..  18  4ETVRKEVALEYCRRVNAGELEGVLQLFAPDARLVDPLGTEP-------VVGRAALAARLAPALRGAV-HEEPGRPYAAHDGTSVVLPATVTVGAPPQRRGRTRVMGVIEVGEDGLIREMRVMWGVTDSSW. 128
6 -50.500d1z1sa1 d.17.4.10 (A:1-129) Uncharacterized protein PA3332 {Pseudomonas aeruginosa [TaxId: 287]}  ali model 3D-neighbors follow..  18  2..NAKEILVHSLRLLENGDARGWCDLFHPEGVLEFPYAPP---GWKTRFEGRETIWAHMRLFPEHLTVRFTDVQFYETADPDLAIGEFHGDGVAVSGGKLAQDYISVLRTR-DGQILLYRDFWNPLRHALG 129
7 -49.300d3rgaa2 d.17.4.0 (A:134-280) automated matches {Streptomyces lasaliensis [TaxId: 324833]}  ali model 3D-neighbors follow..  19  3EERRKELAREHCLRINDGDVDGLLKLYSPRIRFEDPVGSWT-------RTGLEALRAHATMAVGSNV-RETAGLTVAGQDGRHAAVTVSATMDYPHRALIGIEYVMVIGVDADGLIDEMRAYWGATDVS.. 143
8 -49.200d3er7a1 d.17.4.24 (A:5-122) Uncharacterized protein Exig0174 {Exiguobacterium sibiricum 255-15 [TaxId: 262543]}  ali model 3D-neighbors follow..  14  1.....TTLDRYFDRTDEKAFDDLISLFSDEITFVLN---------GQEQHGIDAWKQFVRMVFTANQDKHMYAGWVPSETGDTMETRWAVCGKSADGSVFTQDGTDIARLNADGKIVYLANVPDDT..... 118
9 -49.100d3i1va2 d.17.4.0 (A:174-311) automated matches {Synechocystis sp. [TaxId: 1148]}  ali model 3D-neighbors follow..  16  18EGVTNATVLNYMDNLNANDFDTLIELFTSDGALQPPFQRP--------IVGKENVLRFFREECQNLKLIPERGVTEPAEDGFTQIKVTGKVQTPWFGGNVGMNIAWRFLLNPEGKIFFVAIDLLAS..... 135
10 -48.400d1s5ac1 d.17.4.10 (C:1-142) Hypothetical protein YesE {Bacillus subtilis [TaxId: 1423]}  ali model 3D-neighbors follow..  16  6FEKACETLRKFMAYMLEKDMKSWTELWDENAVFEFPYAPE---GSPKRIEGKAAIYDYIKDYPKQIHLSFTAPTVYRSADSNTVIAEFQCDGHVETGLPYRQSYISVIETR-DGRIVRYRDYWNPLVVK.. 132
11 -46.400d1nwwa_ d.17.4.8 (A:) Limonene-1,2-epoxide hydrolase {Rhodococcus erythropolis [TaxId: 1833]}  ali model 3D-neighbors follow..  14  17STPDEKIVLEFMDALTSNDAAKLIEYFAEDTMYQNMPLPP--------AYGRDAVEQTLAGLFTVMS-IDAVETFHIGSSNGLVYTERVDVLRAPTGKSYNLSILGVFQLT-EGKITGWRDYFDLREFAVD 140
12 -46.300d3dmca1 d.17.4.10 (A:1-133) Uncharacterized protein Ava2261 {Anabaena variabilis [TaxId: 1172]}  ali model 3D-neighbors follow..  15  10LKVAHQGFEFFTQGLATGEWQKFLDMLTEDFTFWFPMG-----EFHGLNVGKERAKEFFTYVSESFHTIQISSLDRVTSNETTVVFEFRDEGLF-LGKPYKNRVAVSFDVR-GDKICSYREYFGSDGKS.. 132
13 -46.100d3ebta1 d.17.4.9 (A:1-131) Uncharacterized protein BPSS0132 {Burkholderia pseudomallei [TaxId: 28450]}  ali model 3D-neighbors follow..  17  2.SNNMQTVRESYEAFHRRDLPGVLAALAPDVRWTHP-DGMSPYGLGGTKHGHDEVIAFIRHVPTHIA-EMRLAPDEFIESGERIVVLGTRRVTAVNGRSATLKFVHVWRFE-NGRAVTFEDHFDTAEMI.. 126
14 -45.100d2bnga1 d.17.4.8 (A:13-144) Uncharacterized protein Mb2760 {Mycobacterium tuberculosis [TaxId: 1773]}  ali model 3D-neighbors follow..  16  2TTEAIRAVEAFLNALQNEDFDTVDAALGDDLVYENVGFSR--------IRGGRRTATLLRRMQGRVG--FEVKIHRIGADGAAVLTERTDALII-GPLRVQFWVCGVFEVD-DGRITLWRDYFDVYDMF.. 118
15 -44.600d1tuha_ d.17.4.11 (A:) Hypothetical protein egc068 from a soil-derived mobile gene cassette {uncultured organism [TaxId: 155900]}  ali model 3D-neighbors follow..  13  3AEQNAETVRRGYAAFNSGDMKTLTELFDENASWHTP----GRSRIAGDHKGREAIFAQFGRYGGETGGTFKAVLLHVLKSDDGRVIGIHRNTAERGGKRLDVGCCIVFEFK-NGRVIDGREHFYDLYAW.. 126
16 -43.500d2k54a1 d.17.4.29 (A:1-123) Uncharacterized protein Atu0742 {Agrobacterium tumefaciens [TaxId: 358]}  ali model 3D-neighbors follow..  13  2NSEIELPVQKQLEAYNARDIDAFMAWWADDCQYYAF-------PATLLAGNAAEIRVRHIERFKE--PDLYGELLTRVIVGNVVIDHETVTRN-FPEGKGEVDVACIYEVE-NGRIAKAWFKIGEPRIV.. 119
17 -42.600d3dm8a1 d.17.4.20 (A:1-135) Uncharacterized protein Rpa4348 {Rhodopseudomonas palustris [TaxId: 1076]}  ali model 3D-neighbors follow..  14  3EHSLWRFSRALHRALNDRQTEELATIIDDNIDWAIY-GPIDMFPFFGARQGKAAVLEVCRQIADSVR-IYRYHRESVMLGIDSAASMVRYSLTAGTNRPISVRMALFTQFQ-NGRLTNLRMVLDTFDLV.. 129
18 -41.200d3en8a1 d.17.4.20 (A:1-127) Uncharacterized protein BxeB2092 {Burkholderia xenovorans [TaxId: 36873]}  ali model 3D-neighbors follow..  14  3EEKIREALNAHWQASAAGDFDAEHDIYDDDAICDYPQS-------GERILGRMNLQALRSHHPGKPA---GFEVRRIQGEGNLWITEYSI-----SYNGRPAYTVSIMEFR-NGKVVHETQYFSDPFEA.. 115
19 -40.300d3grda_ d.17.4.0 (A:) automated matches {Bacillus cereus [TaxId: 222523]}  ali model 3D-neighbors follow..  14  2PKANLEIIRSTYEGSASSNAKHLAEALSEKVEWTEAEG----FPYGGTYIGVEAIMENVFSRLGSEDYKASVNMYHEVSGKDVIIAEGMYSGVYDTGKSFEAEFVHVWQLE-NGKIVKFKQYVDSHLVR.. 128
20 -39.700d3fgya1 d.17.4.0 (A:1-128) automated matches {Burkholderia xenovorans [TaxId: 266265]}  ali model 3D-neighbors follow..  15  3TQENVQIVKDFFAAMGRGDKKGLLAVSAEDIEWIIP----GEWPLAGTHRGHAALAALLQKASEMVE-ISYPEPPEFVAQGERVLVVGFATGRVSTNRTFEDDWVFAITVR-KSKVTSIREYIDTLALARA 128
21 -39.400d3g8za_ d.17.4.0 (A:) automated matches {Xanthomonas campestris [TaxId: 340]}  ali model 3D-neighbors follow..  18  2..NTIDIAKSYITAIQTGDHATLGSIISPDVIWHQP----GNHQFSGTHRGMAVVGPMLGKMMEVSNGTFISRADDYMASGDWVAITLEFSGQ-ANGVTLKQAGVDLLRIE-DGKIVEVRLFSADQTQE.. 123
22 -38.800d3ec9a1 d.17.4.10 (A:10-139) Uncharacterized protein BTHI0051 {Burkholderia thailandensis [TaxId: 57975]}  ali model 3D-neighbors follow..  12  2.RTPYQIVADHYAASDRHDPAAMMADIAPAIEWTEMAG----FPCAGTYRSADEIVRNVFRRLGEEWDGYTFKLDALHDAGDTVIGVGRYSGTYRTGKSFECRVAHVWRVD-AGKIVHFEQFTDTLLVA.. 125
23 -38.300d3ecfa1 d.17.4.21 (A:2-129) Uncharacterized protein Ava4193 {Anabaena variabilis [TaxId: 1172]}  ali model 3D-neighbors follow..  2TEKYHEILKKYFLSFETGDFSQV--QFSCNLEFLSPISGNT-------LKGTEEVIPFLKGVTTRVA---EVNIMSTTVEYPRASGVWQMRTTKGT----LYTLHNFFRL-DEEGIVYVWPMFDPKAVME. 114
24 -36.300d3dxoa1 d.17.4.19 (A:1-117) Uncharacterized protein Atu0744 {Agrobacterium tumefaciens [TaxId: 358]}  ali model 3D-neighbors follow..  14  2.TQHLTIAQTYLAAWNEEDNERVGQAWAENTRYVDPLMQ---------GEGQQGIAAMIEAARQKFPGYRFVLAGTPDGHGNFTRFSWRLI---SPDGDDVAGGTDVVSLNTEGRIDNVVGFLDG...... 117
25 -36.000d2imja1 d.17.4.23 (A:5-159) Hypothetical protein PFL3262 {Pseudomonas fluorescens [TaxId: 294]}  ali model 3D-neighbors follow..  13  12RESAIEKIRLAEDGWNSRDPERVSLAYTLDTQWRNR---------AEFAHNREEAKAFLTRKWAKEL-DYRLIKELWAFTDNRIAVRYAYEWHDDSGNWFRSYGNENWEFDEQGLMARRFACINDMPIK.. 130
26 -30.400d1sjwa_ d.17.4.9 (A:) Nogalonic acid methyl ester cyclase SnoaL {Streptomyces nogalater [TaxId: 38314]}  ali model 3D-neighbors follow..  12  1.SRQTEIVRRMVSAFNTGRTDDVDEYIHPDYLNPATLEH-------GIHTGPKAFAQLVGWVRATFSEEARLEEVRIEERGPWVKAYLVLYGR-PTDRRFSGEQVHLMRI-VDGKIRDHRDWPDFQGTLLG 132
27 -26.700d3d9ra1 d.17.4.27 (A:3-134) Uncharacterized protein ECA1476 {Pectobacterium atrosepticum [TaxId: 29471]}  ali model 3D-neighbors follow..  13  7LAVIEAAAIAYLTAFNRADIPAVIATYTDDGVLMGPGRPA--------AVGKDELAEVYLSVFETVGFDMAYEIKEVQTSADWAFVRSATEGTEATGVVTPAQELFLLRKSATGSWQTARYCTSKIS.... 131
28 -26.600d2geya1 d.17.4.9 (A:2-145) Putative hydroxylase AclR {Streptomyces galilaeus [TaxId: 33899]}  ali model 3D-neighbors follow..  10  3.AERKALCLEMVAAWNRWDLSGIIKHWSPDIVHYSEDNE----------VSSADMVKLMEGGLKAFPD-LQLEVKSIMAEEDRVALRITVTAT-PTGQRVSWHLVEELRF-VDGKVVEHWDVINMRPLLLG 130
29 -26.000d2gxfa1 d.17.4.22 (A:1-128) Hypothetical protein YybH {Bacillus subtilis [TaxId: 1423]}  ali model 3D-neighbors follow..  14  2EQQLKDIISACDLAIQNEDFDTLMNYYSEDAVLVVKPGMI--------ARGKEEIKKAFITIANYFNIVPTQGKMILLEAGDTVLVLSQTLLDSDKKYAMERRATYVFKKNAQGEWLCVIDNSYGTDLI-G 128
30 -24.600d3bb9a1 d.17.4.16 (A:27-147) Uncharacterized protein Sfri1973 {Shewanella frigidimarina [TaxId: 56812]}  ali model 3D-neighbors follow..  14  2DSAAGNVVKQFHAALQMGNEAIVRQSLAANVQIYEG---------GKVERSLTEYANHHMLADMAYGLTITPKEHQITITGDIAISTSISHAQEYKGKSIDSMTTLVLIKQADGRWKITHVHWS....... 121
31 -22.600d2owpa1 d.17.4.18 (A:1-128) Hypothetical protein BxeB1374 {Burkholderia xenovorans [TaxId: 36873]}  ali model 3D-neighbors follow..  11  9VAQVQAAFVEYERALVENDIEAMNALFWHTPETVRYGI-------AEVQHGGEAIRAWRERCEPVPKSRKLHRTVVTTFGTDFATVSTEFTSDATPLLGRQMQTWARLSPADGWKIVAAHV.......... 122
32 -22.100d2ux0a1 d.17.4.7 (A:387-521) Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  11  10KQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEAL------GNLVEGMDFHKFYFENLLSKNSIHTTILNPHVHVIGEDAACIAYIRLTQGQGRPRTSQSEETRVWRRDGKWLNVHYHCSGA..... 135
33 -22.000d3b7ca1 d.17.4.16 (A:1-121) Uncharacterized protein SO0125 {Shewanella oneidensis [TaxId: 70863]}  ali model 3D-neighbors follow..  3TDDIVQLLKGQEEAWNRGDLDAYMQGYWQNEQLMLISN-------GKFRNGWDETLAAYKKNYPDKESLGELKFTIKMLSNYAAMVVGRWDLKRLKDTPTGVFTLLVEKIDDRWVITMDHS.......... 119
34 -21.400d3cu3a1 d.17.4.28 (A:9-170) Uncharacterized protein NpunR1993 {Nostoc punctiforme [TaxId: 272131]}  ali model 3D-neighbors follow..  10  6ESAIRAFHRQMIDAWNRGSGEGFAAPFSETADFITFEGT--------HLKGRKEIAAFHQQAFDTVVKGTRLEGEVDFVNSQLALMLVVIRVILPGQTETSASRDSLPLYKGDEQIEGLLN.......... 126
35 -21.000d3ejva1 d.17.4.28 (A:2-160) Uncharacterized protein Saro2766 {Novosphingobium aromaticivorans [TaxId: 48935]}  ali model 3D-neighbors follow..  12  5ETIILNVLGQYTRAHDRRDPDAMAALFAPEATIEIVDAVGGASRSISRLEGRDAIRVAVRQMMAPHGSQNVVNAPIIVIEGDHAVLDFMVFSILAAEVPDGGWPTGTFGAQGRIVPIEAGQYRLTLRTVAD 141
36 -20.500d3cnxa1 d.17.4.17 (A:5-157) Uncharacterized protein SAV4671 {Streptomyces avermitilis [TaxId: 33903]}  ali model 3D-neighbors follow..  11  6VEQVGLANTAFYEAMERGDFETLSSLWLTPADLGVDEEYHDVHPGWPVLSGRGEVLRSYALIMANTEYQFFLTDVHVSVTGDTALVTCTENILSGGPPGQLVVATNVFRRTPDGKLWSHHA.......... 148
37 -19.400d2rgqa1 d.17.4.25 (A:1-133) Uncharacterized protein NpunR3134 {Nostoc punctiforme [TaxId: 272131]}  ali model 3D-neighbors follow..  12  8KLEIMELAARFEMSLDKEDVENYLATFASDGALQGF---------WGIAKGKEELRQGFYAMLDTFARGKRSSNAIIQGNYDEATMESYLTVVNREDLNRAGSA-QVRKINGKWYLILRQIEVD....... 127
38 -19.300d5ig0a_ d.17.4.0 (A:) automated matches {Salpingoeca rosetta [TaxId: 946362]}  ali model 3D-neighbors follow..  13  6AKAVLEVNDELLKAVASGDWDAYTTMVDPNVTCFEPEAA------GVLAKGLAFHKFFFDNRSPNADKKTTLHDPAVQMFGDTAIVTALRVVQFVADDTTRYEETRVWV-KDAAKLVHFH........... 127
39 -18.000d2chca1 d.17.4.25 (A:1-167) Uncharacterized protein Rv3472 {Mycobacterium tuberculosis [TaxId: 1773]}  ali model 3D-neighbors follow..  17  11ILRIQALCARYCLTINTQDGEGWAGCFTEDGAFEFD---------GWVIRGRPALREYADAHARVVRGRHLTTDLLYEVDGDVATGRSAS--------------VVTLATAAGYKILGSGEYQDRLIKQDG 118
40 -17.000d3b8la1 d.17.4.28 (A:1-144) Uncharacterized protein Saro3538 {Novosphingobium aromaticivorans [TaxId: 48935]}  ali model 3D-neighbors follow..  14  8RLAIQDLMIAYAHAVDTSDIDAVLDVFTEDAVFDLS------GIGLTPQVGHAGIREFFTNVFANMSHHAHYLTNFAVTEGDTASMRAYVIGVGKDGRAVTVNG-EVRRTEKGWKATRYT........... 129
41 -16.200d3ef8a1 d.17.4.28 (A:1-149) Uncharacterized protein Saro1465 {Novosphingobium aromaticivorans [TaxId: 48935]}  ali model 3D-neighbors follow..  11  9MRAIERMMFDYSYHLDMNHPEELAALFVEDCEVSY--------APNFGATGRDAYKKTLEGIGTFFRGTSH------------HNSNICIDFVSETEANVRSVVLAIHRYTKERPGILYGQYFDTVVKVDG 120
42 -15.700d2rfra1 d.17.4.28 (A:1-153) Uncharacterized protein Saro3722 {Novosphingobium aromaticivorans [TaxId: 48935]}  ali model 3D-neighbors follow..  10  17REEIRELIARYGPLADSGDAEALSELWVEDGEYA--------VVGFATAKGRAAIAALIDGQTHRALCAHFLGPATVTVEGDTATARCHSVVFRCVSGTFGSHRVSANRTPAGWRAVRRE........... 137
43 -15.300d3ebya1 d.17.4.4 (A:6-162) Putative hydroxylase subunit Saro3860 {Novosphingobium aromaticivorans [TaxId: 48935]}  ali model 3D-neighbors follow..  13  7QSAIDDFNAAYGLCLDDDRLEQWPTLFVDDCLYQVIARENVDNGLPAAVDSKGMLADRVVALRKANVFPEHFNRHLIGGDQVSAEASYVVFQTRNDGETRIYKYVDRFDLSGGTRLKSRTCIYDTLRI... 149
44 -14.000d3blza1 d.17.4.14 (A:3-126) Uncharacterized protein Sbal0622 {Shewanella baltica [TaxId: 62322]}  ali model 3D-neighbors follow..  8YHAIVEVLSKYNEGGKKADSTIMRPAFSSQATIFGVDVDNKLT--------GGPIQGLFDVIDNVFHPSPEAKAAIARIDIVGTAASARIDTDDISGFRF-TDFFNLLKVEGKWTVVS............. 116
45 -13.900d3duka1 d.17.4.0 (A:1-124) automated matches {Methylobacillus flagellatus [TaxId: 265072]}  ali model 3D-neighbors follow..  10IDGITEVLNVYMNAAESGTGEEMSAAFHKDATIFGYVGDKLA---------FNGPIKDLYDWHNSNGPAKNVQSRITNIDIVGTVAHARVEAENWTNFKF-SDLFLLLKLDGKWTIVN............. 117
46 -13.100d3gzyb_ d.17.4.4 (B:) automated matches {Comamonas testosteroni [TaxId: 285]}  ali model 3D-neighbors follow..  14  22QHQVEQFYYREAQLLDHHAFQAWFALLAEDIHYWMPIRTVRTAREQGLEYVPAGANAHFDDTHATMYGRI-----------RQKTSDLNWAEDPPSRTRHLVSNVIVREMDTPGTLEVASAF-RQVDVFAG 148
47 -11.900d2b1xb1 d.17.4.4 (B:513-679) Naphthalene 1,2-dioxygenase beta subunit {Rhodococcus sp. ncimb12038 [TaxId: 92694]}  ali model 3D-neighbors follow..  11  7VREITEWLYMEAELLDAGKYREWLALVTEDLSYVVPIRVTREREAVTDVVEGMTHMDDDADSMEMRVLRLETEYAWAEDPPSRFVTNVRVATGDSEDEFKVTSNLLLYRTRGDV---------ATYDVLSG 131
48 -11.900d3fsda_ d.17.4.0 (A:) automated matches {Rhodospirillum rubrum [TaxId: 269796]}  ali model 3D-neighbors follow..  13  1.DDIAFYEERLRAAMLTGDLKGLETLLADDLAFVDHTG--------CVKTKQTHLEPYRAGLLKLSRLDLSDAVVRAAGEDGRVVVVRAVTAGVYDGEAFTETLRFT--RRTQGP................ 107
49 -11.900d3e99a1 d.17.4.4 (A:1-163) Benzoate 1,2-dioxygenase beta subunit BenB {Burkholderia mallei [TaxId: 13373]}  ali model 3D-neighbors follow..  6LADIQAFLYRESRLLDDKAWDAWLDCYRADAVFWMPSWDDADALVTDPQREISLIERSSATVPDTRTSHNIANVERESADGDVHTVRFNWSYRYKTVSSYFGMSRYAIDFSGDAKIVSKYVVLKNDYI... 154
50 -11.700d2r4ia1 d.17.4.15 (A:1-122) Uncharacterized protein CHU142 {Cytophaga hutchinsonii [TaxId: 985]}  ali model 3D-neighbors follow..  13  4RDVILDCEKKLLTAIQNNDVESLEVLLHDDLLFIIPSG--------ETVTKETDIAAYSSGKIALRAVVPSDYIIRIIHDTVVVSVNIEIKGEYMEHTDNTFRYLRVWKLFDGN................. 110
51 -11.600d1of5b_ d.17.4.2 (B:) mRNA transport regulator MTR2 {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  3AQITATFTKKILAHLDDPDSNKVQLFNPNNCRI-----------NATPFAQATVFLQMWQNQVVQTQHALTGVDYHAIPGSGTLICNVNCKVRFDESGRDKMGQDATVPIQPNN................. 111
52 -11.600d1idpa_ d.17.4.1 (A:) Scytalone dehydratase {Fungus (Magnaporthe grisea) [TaxId: 148305]}  ali model 3D-neighbors follow..  8YLGLMTCVYEWADSYDSKDWDRLRKVIAPTLRID-----RSFLDKLWEAMPAEEFVGMVSSKQVLGDPTLRTQTRWEKVSEDEVIGYHQLRVP...................................... 101
53 -11.100d1jkgb1 d.17.4.2 (B:371-555) NTF2-like domain of Tip associating protein, TAP {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  13  14KSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIPFIPQNPARSSLHTRLNVVAFLNELPKTQHDVNSFVVDISAQTSTLLCFSVNGVFKEVDGKSRAFTRTFIAVPASNSGLCIVNDELFVRNAS.. 170
54 -11.000d1vqqa1 d.17.4.5 (A:27-138) Penicillin binding protein 2a (PBP2A), N-terminal domain {Staphylococcus aureus [TaxId: 1280]}  ali model 3D-neighbors follow..  1....DKEINNTIDAIEDKNFKQVYKDSSYIS---------------KSDNGEVEMTERPIKIYNSLGVK-IQDRKIKKVSKNKKRVDAQYKIKTNYGNIDRNVQFNFVKEDGMWKLD-----WDHSVIIPG 109
55 -10.200d1tp6a_ d.17.4.12 (A:) Hypothetical protein PA1314 {Pseudomonas aeruginosa [TaxId: 287]}  ali model 3D-neighbors follow..  12  1.CAYRREIHHAHVAIRDDALDALMARFAEDFSMVTPHG---------VVLDKTALGELFRSKGGTRPGRIEIDGESLLASGVDGATLAYREIQSDAAGRSERLSTVVLHRDDEGRLY.............. 116
56 -9.930d1gy7a_ d.17.4.2 (A:) Nuclear transport factor-2 (NTF2) {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  10  3NTLAQNFTQFYYNQFDT-DRSQLGNLYRNESMLTFE---------TSQLQGAKDIVEKLVSLPFQKVQHRITTLDAQPASPYGDVLVMITGDLLIDEEQNPQRFSQVFHLIPDG-----NSYYDIFRLNYS 121
57 -9.370d3q90a_ d.17.4.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  3LLVGREFVRQYYTLLNQ-APDMLHRFYGKNSSYVHG-GLDSNGKPADAVYGQKEIHRKVMSQFTNCHTKIRHVDAHATLNDGVVVQ---VMGLLSNNNQALRRFMQTFVLAPEGSVA--NKFYVHNDI... 124

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10.