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Query: d3c7bb4 d.58.36.2 (B:4-122) Dissimilatory sulfite reductase subunit beta, DsrB {Archaeoglobus fulgidus [TaxId: 2234]}, from SCOP207

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst EGVKTDFGPPYFRDLLHPVIAKNYGKWKYHEVVKPGVIKRVAESGDVIYVVRFGTPRLLSIYTVRELCDIADKYSDGYLRWTSRNNVEFFVTDESKIDDLINEVQERVGFPCGGTWDAVLast
1 -57.500d3c7bb4 d.58.36.2 (B:4-122) Dissimilatory sulfite reductase subunit beta, DsrB {Archaeoglobus fulgidus [TaxId: 2234]}  ali model 3D-neighbors  100  1EGVKTDFGPPYFRDLLHPVIAKNYGKWKYHEVVKPGVIKRVAESGDVIYVVRFGTPRLLSIYTVRELCDIADKYSDGYLRWTSRNNVEFFVTDESKIDDLINEVQERVGFPCGGTWDAV 119
2 -36.600d1zj8a2 d.58.36.1 (A:10-161) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]}  ali model 3D-neighbors follow..  15  18EELKKAGNPLDVRERIENIYAKTQREQGYDGTWTGDDNIDKLEAKYFMMRVRCD-GGALSAAALRTLGQISTEFARDTADISDRQNVQYHWIEVENVPEIWRRLDDVGLQTTEAC.... 152
3 -32.500d3b0ga1 d.58.36.0 (A:18-174) automated matches {Tobacco (Nicotiana tabacum) [TaxId: 4097]}  ali model 3D-neighbors follow..  12  53............KIPIEEIDQSKLTKDDIDVRLKWLGLFHRRKNQYGRFMMRLKLPGVTTSAQTRYLASVIRKYGEGCADITTRQNWQIRGVVLPDVPEILKGLAEVGLTSLQSG.... 157
4 -30.700d3b0ga3 d.58.36.0 (A:346-429) automated matches {Tobacco (Nicotiana tabacum) [TaxId: 4097]}  ali model 3D-neighbors follow..  19  1.............................KQWERRDYLGVHPQKQEGYSFIGLHIPGRVQADDMDELARLADEYGSGEIRLTVEQNIIIPNIETSKIEALLKEPVLSTFSP........ 83
5 -29.500d1zj8a1 d.58.36.1 (A:327-406) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]}  ali model 3D-neighbors follow..  12  6.....................................VGVQRLKNGLNAVGVAPIAGRVSGTILTAVADLMARAGSDRIRFTPYQKLVILDIPDALLDDLIAGLDALGLQS........ 79
6 -25.400d4g38a1 d.58.36.0 (A:81-145) automated matches {Escherichia coli K-12 [TaxId: 83333]}  ali model 3D-neighbors follow..  12  1.................................................LLRCRLPGVITTKQWQAIDKFAGENTYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDAL....... 65
7 -19.800d4g38a3 d.58.36.0 (A:346-425) automated matches {Escherichia coli K-12 [TaxId: 83333]}  ali model 3D-neighbors follow..  20  1.....................................IGWVKGIDDNWHLTLFIENGRILDYPARPLLEIAKIHK-GDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVT..... 80
8 -15.600d3mmca2 d.58.36.2 (A:1-166) Dissimilatory sulfite reductase subunit alpha, DsrA {Archaeoglobus fulgidus [TaxId: 2234]}  ali model 3D-neighbors follow..  18  95..............................................HTMRINQPSGWFYSTKALRGLCDVWEKWGSGLTNFGSTGDIIFLGTRSEYLQPCFEDLGNLEIFDIGGSG... 166
9 -8.040d1eexg_ a.23.2.1 (G:) Diol dehydratase, gamma subunit {Klebsiella oxytoca [TaxId: 571]}  ali model 3D-neighbors follow..  16  44.........................................................RITPETLRLQASIAKDAGRDRLAMNFERAAELTAVPDDRILEIYNALR.............. 91
10 -7.050d1bd0a1 b.49.2.2 (A:2-11,A:245-382) Alanine racemase {Bacillus stearothermophilus [TaxId: 1422]}  ali model 3D-neighbors follow..  13  30....................................................VSYGATYTAQTEEWIGTIPIGYADGWLRRLQHFHVLVDGQKAPIVGRICMDQCMIRLPGPLPVGTKV 96

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang Y, Stec B, Godzik A. Between order and disorder in protein structures: analysis of "dual personality" fragments in proteins. Structure. 2007 Sep;15(9):1141-7.