Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: d3e1za_ b.1.26.1 (A:) Chagasin {Trypanosoma cruzi [TaxId: 5693]}, from SCOP207

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .
# Score Template Links and tools%idFirst SHKVTKAHNGATLTVAVGELVEIQLPSNPTTGFAWYFEGGTKESPNESMFTVENKYFPPDSKLLGAGGTEHFHVTVKAAGTHAVNLTYMRPWTGPSHDSERFTVYLKANLast
1 -60.900d3e1za_ b.1.26.1 (A:) Chagasin {Trypanosoma cruzi [TaxId: 5693]}  ali model 3D-neighbors  100  1SHKVTKAHNGATLTVAVGELVEIQLPSNPTTGFAWYFEGGTKESPNESMFTVENKYFPPDSKLLGAGGTEHFHVTVKAAGTHAVNLTYMRPWTGPSHDSERFTVYLKAN 109
2 -57.100d2c34a1 b.1.26.1 (A:1-113) Inhibitor of cysteine peptidases, ICP {Trypanosome (Leishmania mexicana) [TaxId: 5665]}  ali model 3D-neighbors follow..  26  2IAPLSVKDNDKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLILEVVCKYTPTPSSTPMVGVGGIYVVLVKPRKRGHHTLELVYTRPFEGIKPENERYTLHLNVK 113
3 -9.930d4uyba3 b.132.1.0 (A:275-400) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  8  1.....KTQYEHSVQINRGSSHQVEYELFPGCVLRWQFSSDGADIGFGVFLKTKMGERQRAGEMTAHMVPEDGNLTCSEAGVYVLRFDNTYSF-----HAKKVSFTVEVL 110
4 -9.310d3bwza_ b.2.2.2 (A:) Cellulosomal scaffoldin adaptor protein B, ScaB {Acetivibrio cellulolyticus [TaxId: 35830]}  ali model 3D-neighbors follow..  17  4SIEIVLDKT----TASVGEIVTASINIKNITGCQLNMKDLEKGILNFSKAYVSLDDYRTAAAPEQTGTVAVVKFKVLKEETSSISFE...................... 129
5 -9.080d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]}  ali model 3D-neighbors follow..  16  17TVEVRAAPDATSLSLPANTVVRLDFQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADAAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYL................ 128
6 -9.070d5k39a1 b.2.2.0 (A:4-163) automated matches {Ruminiclostridium thermocellum [TaxId: 1249482]}  ali model 3D-neighbors follow..  13  2HIALELDKT----KVKVGDVIVATVKAKNMTGIQVNIKDINSGIINYASCYVYWDSYRESGVSESTGIIGKVGFKVLKAANTTVKLE...................... 129
7 -9.010d4knua2 b.6.1.0 (A:154-309) automated matches {Nitrosomonas europaea [TaxId: 228410]}  ali model 3D-neighbors follow..  18  41...VHDSEATSWLQAKPGERVRIYFVNAGPNAGIWDRVYPSGNPK--------NVQYALQSYLIGAGDAATLDLISPVEGANAI......................... 121
8 -9.000d1xaua_ b.1.1.4 (A:) B and T lymphocyte attenuator, Btla {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  10  8.......KRNSKHSAWTGELFKIECPCVHRPNVTWC--KHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGS------YSCSTNFNSQVINSHSVTIHVR 104
9 -8.960d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car), domain 1 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  10  2ARSLSITTPEEMIEKAKGETAYLPCKFTLSP-IEWLISPADNQKVDQVIILYSGD-KIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTVANKKIHLVVLV. 124
10 -8.850d1hnfa1 b.1.1.1 (A:4-104) CD2, first domain {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  15  1.......TNALETWGALGQDINLDIPSDDIDDIKWEKTS-DKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIY-----DTKGKNVLEKIFDLKIQ 100
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;