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Query: d5b1na_ a.30.2.1 (A:) automated matches {Escherichia coli [TaxId: 562]}, from SCOP207

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .
# Score Template Links and tools%idFirst ADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEECNAIIEQFIDYLRLast
1 -47.800d5b1na_ a.30.2.1 (A:) automated matches {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors  100  1ADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEECNAIIEQFIDYLR 59
2 -17.200d2c2aa1 a.30.2.1 (A:232-320) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  28  20...KTEFIANISHELRTPLTAIKAYAETILSTLKEFLEVIIDQSNHLENLLNELLDFSR 83
3 -4.770d2qamx1 a.2.2.1 (X:1-63) Ribosomal protein L29 (L29p) {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  10  14.......LNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNE...... 59
4 -4.600d2baya_ g.44.1.2 (A:) automated matches {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  25  24..EKSLLEQYVKDTGNDPITNEPLSIEEI.............................. 50
5 -4.480d1wgma1 g.44.1.2 (A:8-92) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  22  39..DRSTIARHLLSDQTDPFNRSPLTMDQI.............................. 65
6 -4.390d3jb9s1 g.44.1.2 (S:1-57) Pre-mRNA splicing factor Prp19 {Schizosaccharomyces pombe 972h- [TaxId: 284812]}  ali model 3D-neighbors follow..  14  24..EKRLIEQVIRETSKDPVTQQECTLEDL.............................. 50
7 -4.160d2q3qa2 d.129.3.1 (A:2-120) Hypothetical protein At1G24000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}  ali model 3D-neighbors follow..  15  45.VKKTMTIQMSGSEIQKYFKTLKGSIAVTPIGVGDHFEKVHKDIDDPHSIIDESVKYFK 110
8 -4.110d1p5xa_ a.124.1.1 (A:) Bacterial phosholipase C {Bacillus cereus [TaxId: 1396]}  ali model 3D-neighbors follow..  16  107.KQAFFYLGLSLHDVNQPM........................................ 127
9 -4.070d1k28a1 b.40.8.1 (A:6-129) Tail-associated lysozyme gp5, N-terminal domain {Bacteriophage T4 [TaxId: 10665]}  ali model 3D-neighbors follow..  17  1..NNLNWFVGVVEDRMDPLKLGRVRVRVVGLHPPQRAQGDVMGIPTEK........... 46
10 -4.030d5b7ga_ c.56.2.0 (A:) automated matches {Aeromonas hydrophila [TaxId: 380703]}  ali model 3D-neighbors follow..  12  192EEMETSSAALVAEAYKVPFVGIRVLSNTDLHGEEFDPQTAIHCQQFVIDYAKALIN... 247
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 9 1 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ginalski K, Grishin NV, Godzik A., Rychlewski L. Practical lessons from protein structure prediction. Nucleic Acids Res. 2005 Apr 1;33(6):1874-91.