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Query: d1b0ba_ a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) [TaxId: 244486]}, from SCOP207

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140
# Score Template Links and tools%idFirst SLSAAQKDNVKSSWAKASAAWGTAGPEFFMALFDAHDDVFAKFSGLFSGAAKGTVKNTPEMAAQAQSFKGLVSNWVDNLDNAGALEGQCKTFAANHKARGISAGQLEAAFKVLAGFMKSYGGDEGAWTAVAGALMGMIRPDMLast
1 -47.100[C] COG1017 Hemoglobin-like flavoprotein  ali follow..  15  2.LDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFNM-----------SNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGTHLLATLDEMFN-LDAWGKAYGVLANVFIHR. 134
2 -27.800[C] KOG3378 Globins and related hemoproteins  ali follow..  10  258RITERQKHIFTETFPVIFKEYKRNGLVLFAKYFSEFPHYKNIWPQ-FRTLQDSALLASNELANHCSVYMSGLKV.................................................................... 330
3 -7.100[R] COG2346 Truncated hemoglobins  ali follow..  6  33.................DATVRALTRRFYELM-DTLPEAARCRA-----------IHPADLSGSEAKFYDYLTGYLGGPPVYVE-----PMLRRRHFVAPIGPAERDEWLLCFRRAMDETIENAKLREIIWAPVERL..... 139
4 -5.830[R] KOG2343 Glucose-repressible protein and related proteins  ali follow..  16  9.................................NESEDVSKTFFKLCDGLRLGELVTTEHFR-----LSDVMSAI--ELGEP-KMDVGVGSKHIKTLKEAISGGLYADDYPFQLAIMDSTLAMVVAWLEGSALGSTVWT... 106
5 -5.700[S] COG3148 Uncharacterized conserved protein  ali follow..  8  129..KPPLFIMLDGTWPEAR------------KMFRKCPYLDHLPVISVDLSRLSAYRLREIHAEGQYCTAEVAIALLDLAGDTEAATSLGEHF.................................................. 206
6 -5.640[KL] KOG2074 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB1  ali follow..  8  68ALAKCEEEPNKLVVLTPAEQLSMAEFELRFKLLRENSELQKLHKQFVESLGKDSIRKSKQQMGLKSMMVSGIKPSTDGRTNRVTFNEIIFQI-----------AEKPAVRQAFINYVPKKMTEKDFWTKYFR.......... 207
7 -5.580[A] KOG1914 mRNA cleavage and polyadenylation factor I complex, subunit RNA14  ali follow..  8  1.MSGLSMRNPERAWREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELR---------SKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEKVGMDVQAYSIFTEYIAFLKKV..... 141
8 -5.480[IOVE] KOG1047 Bifunctional leukotriene A4 hydrolase/aminopeptidase LTA4H  ali follow..  8  275CLTFVTPTLLAGDKSLSNVIAHEISHSWTGNLVTNK--LNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYEK-GFALLFYLEQLLGGPEIFLGFLKAYVE...... 413
9 -5.480[A] COG5107 Pre-mRNA 3`-end processing (cleavage and polyadenylation) factor  ali follow..  5  43...........LSYFQLIQYLETQEREVYEQFHNTFPFYSPAWTLQL------KGELARDEFETVEKILAQCLSGKLENNDLSLWSTYLDYIRRKNNLITGGQEARAVIVKAFQLVMQFEPKSSSFWNEYLNFLEQW..... 171
10 -5.330[S] COG4275 Uncharacterized conserved protein  ali follow..  10  3TRSRPKIDRIACPW-LIRRFVDPRARFLYVTPAEVEAVGERFWSHRGEECTFDTMVKEFGLSFPA---LEHVARIVRGADEAAGLLAVSLGLSRMYADDLEQLEAGMTIYDALYRWARDATQEKHDWVS............. 146
FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 2 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.