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Query: d1noga_ a.25.2.2 (A:) Hypothetical protein Ta0546 {Thermoplasma acidophilum [TaxId: 2303]}, from SCOP207

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst SPVVEVQGTIDELNSFIGYALVLSRWDDIRNDLFRIQNDLFVLGEDVSTGGKGRTVTREMIDYLEARVKEMKAEIGKIELFVVPGGSVESASLHMARAVSRRLERRIVAASKLTEINKNVLIYANRLSSILFMHALISNKRLNIPEKIWLast
1 -70.600[S] COG2096 Uncharacterized conserved protein  ali follow..  40  33DLRVEAYGTVDETNSAIGIARLHTSGETLDAMLFRIQNDLFDLGADLATPDNGEPIVESQVMRLENEIDELNAALEPLTSFVLPGGSAAAANLHMARTVCRRAERLMVELSVTEIVSPAALKYANRLSDFLFVAARFTNEA-GRADILW 190
2 -35.500[E] COG4812 Ethanolamine utilization cobalamin adenosyltransferase  ali follow..  14  107DPRLGFRAVLDSTIALAVWLQIELA-EPWQPWLADIRSRLGNIMRADALGEGCQAIVGLSDEDLHRLSHQPLRYLDHDHLVPEASHGRDAALLNLLRTKVRETETVAAQVFITRSLRPDILQALNRLSSTVYVMMILSVTKQPLTVKQI 259
3 -6.800[K] KOG4552 Vitamin-D-receptor interacting protein complex component  ali follow..  17  6STKERLLLLIDDIEMIAKELIEQAHQKISSTELVDLLDLLVAKDEEFRKM-EEQAKVEEAMDQLRAKVEVHDREIQKLQKSLKDAELILSTAIFQARQKLASINQ-----ANKRPVSEELIKYAHRISSANAVSA.............. 139
4 -6.480[O] KOG0448 Mitofusin 1 GTPase, involved in mitochondrila biogenesis  ali follow..  10  77..KVAFFGRTSSINAMLWDKVLPSGIGHITNCFLSVEKTVNQLAHALHMDKDLKAGCLVRVFWPKAKCALLRDDLVLVDS---PGTDVTTELDSWIDKFCLDADVFVLVANSESTLMNTEKHFFHKVNPNIFILNNRWDASASEPEYM. 249
5 -6.370[R] COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase  ali follow..  18  11.............................................................NVLEAAQERIMWTLETLPRVCVSGGKDSGLMLHLTATLARKMNKKIHVLFIDWEAQSCTITYIESLREYY.................. 83
6 -5.840[S] COG2237 Predicted membrane protein  ali follow..  63.....IVGREANVRAAVALGIADPEDSDTNTIFGGIRDELLEKGAEIVSFAGDKNVGVISDQKIAEQLELYLQMNEVKRAVFVSDGAEDETLVPIVQSRMKIDSVKRIVVMQSENLESTYYILKHVFSD.................... 190
7 -5.560[R] KOG4678 FOG: Calponin homology domain  ali follow..  13  304......HSTAEELQATL-------------QELSDQQQMVQELTAENEKLVDEKTILETSFHQHRERAEQLSQENEKLMNLLQERVKNEEPTTQEGKII--ELEQKCTGILEQGRFEEKLLNIQQQLTCSLRKVEEENQGALEMIKRL. 431
8 -5.330[S] COG4472 Uncharacterized protein conserved in bacteria  ali follow..  20  1.........MGFTEETVRFKLDDSNKKEISETLTDVYASLNDKG----------------------------NPINQIVGYVLSGDPAYVPRYNNARNQIRKYERDEI-------VEELVRYYLKG....................... 83
9 -5.010[T] KOG4244 Failed axon connections (fax) protein/glutathione S-transferase-like protein  ali follow..  200.................................SALLRRITGSDIGFHSREDIINIGSEDLKAISKYLGN--------KHYFHPTKVDACIFSHLCQIYYAPYTSEHRDLIDGE---KNLAEYVERIKNRFY................. 291
10 -5.010[K] KOG3404 G10 protein/predicted nuclear transcription regulator  ali follow..  1..............................................MPKVKRSRKAPQDGWELIEPTLDQLDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAYSRELLDICEGLADKNLL................ 89

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10.