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Query: d3g46a_ a.1.1.2 (A:) Hemoglobin I {Ark clam (Scapharca inaequivalvis) [TaxId: 6561]}, from SCOP207

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .
# Score Template Links and tools%idFirst PSVYDAAAQLTADVKKDLRDSWKVIGSDKKGNGVALMTTLFADNQETIGYFKRLGDVSQGMANDKLRGHSITLMYALQNFIDQLDNPDDLVCVVEKFAVNHITRKISAAEFGKINGPIKKVLASKNFGDKYANAWAKLVAVVQAALLast
1 -48.700[C] COG1017 Hemoglobin-like flavoprotein  ali follow..  18  2.........LDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFNM--------SNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGTHLLATLDE-NPGQEVLDAWGKAYGVLANVF 131
2 -29.200[C] KOG3378 Globins and related hemoproteins  ali follow..  18  250IKMRQEMDRITERQKHIFTETFPVIFKEYKRNGLVLFAKYFSEFPHYKNIWPQFRTLSALLASNELANHCSVYMSGLKV................................................................... 330
3 -9.030[R] COG2346 Truncated hemoglobins  ali follow..  9  33.........................DATVRALTRRFYELM-DTLPEAARCRA--------IHPADLSGSEAKFYDYLTGYLGGPPVYVE-----PMLRRRHFVAPIGPAERDEWLLCFRRAMDETIENAKLREIIWAPVERLAFHM 143
4 -7.190[U] KOG3230 Vacuolar assembly/sorting protein DID4  ali follow..  7  28.ELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGKLPQIQKIMMEFERQAEIMDMKEE---MMNDAIDDAMGDEEDEEESDAVVSQVLDEL.... 171
5 -7.040[U] KOG3231 Predicted assembly/vacuolar sorting protein  ali follow..  10  27.AIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQDPQKTLQTMQNFQKENMKMEMTEE---MINDTLDDIFDGSDDEEESQDIVNQVLDEI.... 170
6 -6.790[U] KOG3232 Vacuolar assembly/sorting protein DID2  ali follow..  9  20.SLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYLRLASRLDAVVARLDTQAKMTTITKSMTNIVKSLENLQKMSETMDSFEKQFVNMEVQAE---FMENAMAGSTSLSTPEGEVNSLMQQVAD...... 161
7 -6.660[U] KOG3229 Vacuolar sorting protein VPS24  ali follow..  8  29.QLDRQIRSIQREEEKVKRSLKQAAQKNDRDTCVILAKEIVNARKAINRIYTSKAHLNSIQMQMKNQLSTLRVAGSLQKSTEVLQRYPELAGIMRDMSKEMMKAGIIEE---MLDETMDSLEESEELEEEASKEVDKVLW...... 170
8 -6.230[A] COG5107 Pre-mRNA 3`-end processing (cleavage and polyadenylation) factor  ali follow..  3  43...................LSYFQLIQYLETQEREVYEQFHNTFPFYSPAWTLQLKGELARDEFE---TVEKILAQCLSGKLENNDLSLWSTYLDYIRRKNNLITGGQEARAVIVKAFQLVMQKCAIFPKSSSFWNEYLNFLEQW. 171
9 -6.130[N] COG5491 Conserved protein implicated in secretion  ali follow..  10  31.ELEREKRKLELQDKKLVSEIKKSAKNGQVAAAKVQAKDLVRTRNYIQKFDNMKAQLQAISLRIQAVRSSDQMTRSMSEATGLLANLPQLQRISMEFEKQSDLMGQRQE---FMDEAIDNVMGDEVDEDEEADE............ 166
10 -6.080[A] KOG1914 mRNA cleavage and polyadenylation factor I complex, subunit RNA14  ali follow..  8  1.........MSGLSMRNPEDAWREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELRSKNFE------NVEKLFSRCLVSVLNIDLWKCYIHYVFETK---GQRDQYREEMAKAYDFALEKVGMDVQAYSIFTEYIAFLKKV. 141
FFAS is supported by the NIH grant R01-GM087218-01
1 4 3 9 1 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Alonso A, Sasin J, Bottini N, Friedberg I, Friedberg I, Osterman A, Godzik A., Hunter T, Dixon J, Mustelin T. Protein tyrosine phosphatases in the human genome. Cell. 2004 Jun 11;117(6):699-711. Review.