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Query: TM0002 TM0002 281883 Purified-2001-08-29, from T.maritima

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40
# Score Template Links and tools%idFirst MSPEDWKRLICFHTSKEVLKQTLDDAQQNISDSVSIPLRKYLast
1 -4.390IDP04003 50S ribosomal protein L18 [Bacillus anthracis str. Sterne] BAS0126 [Bacillus anthracis str. Sterne]  ali follow..  28  30.......RLNVFRSNQHIYAQVIDDVNGVTLVSAS...... 57
2 -3.860IDP04117 gene: spa13; spa13, component of the Mxi-Spa secretion machinery [Shigella flexneri] CAC05825 [Shigella flexneri]  ali follow..  20  41......KHIIQYQSERILLKGRIEEIQKDIDEANAS..... 70
3 -3.590IDP90768 gene: argG; argininosuccinate synthase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0665c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  24  323...........FSPERMMLQALIDESQIHANGRVKLELYK. 351
4 -3.370IDP05356 conserved domain protein [Bacillus anthracis str. Ames] BA_3897 [Bacillus anthracis str. Ames]  ali follow..  24  16............ETTTIPLKNPINKNFKNGSGTHTFPIKKH 44
5 -3.140IDP90545 gene: fabG; 3-ketoacyl-(acyl-carrier-protein) reductase [Yersinia pestis CO92] YPO1599 [Yersinia pestis CO92]  ali follow..  25  98MKDDEWQDIIVFRLSKAVMRAMMKKRFGRIITIGSV..... 139
6 -3.140IDP90557 gene: fabG; 3-ketoacyl-(acyl-carrier-protein) reductase [Vibrio cholerae O1 biovar eltor str. N16961] VC2021 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  30  102MKEEEWSDIMIFRLSKAVLRGMMKKRQGRIINVGSV..... 143
7 -3.140IDP91252 gene: fabG; fabG [Listeria monocytogenes] NT01LM1948 [Listeria monocytogenes EGD-e]  ali follow..  22  102MKEDEWDDVITFLCTKAVSRTMMKQRAGKIINMASV..... 143
8 -3.100IDP02724 gene: fabG; acetoacetyl-CoA reductase [Bacillus anthracis str. `Ames Ancestor`] GBAA1330 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  33  103LNREDWERVIVFNTTSAVLPYITEAEEGRIISISSI..... 144
9 -3.060IDP91297 gene: fabG; 3-ketoacyl-(acyl-carrier-protein) reductase STM1195 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  25  98MKDDEWNDIIVFRLSKAVMRAMMKKRCGRIITIGSV..... 139
10 -3.060IDP91290 gene: fabG; 3-ketoacyl-(acyl-carrier-protein) reductase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] SPA1656 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]  ali follow..  25  98MKDDEWNDIIVFRLSKAVMRAMMKKRCGRIITIGSV..... 139

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Lesley SA, Kuhn P, Godzik A., Deacon AM, Mathews I, Kreusch A, Spraggon G, Klock HE, McMullan D, Shin T, Vincent J, Robb A, Brinen LS, Miller MD, McPhillips TM, Miller MA, Scheibe D, Canaves JM, Guda C, Jaroszewski L, Selby TL, Elsliger MA, Wooley J, Taylor SS, Hodgson KO, Wilson IA, Schultz PG, Stevens RC. Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline. Proc Natl Acad Sci U S A. 2002 Sep 3;99(18):11664-9. Epub 2002 Aug 22.