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Query: TM0010 TM0010 281891 Purified-2005-03-03, from T.maritima

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPLTTNTILICAGGACISAGEKSVKDAFEEELRKYGLDEVVRVIETGCMGACTLGPIAVIYPESVFYQKLTPDAAREIVEEHILKGRIVEKYLYKASEGKPVPRVHEEVPFFKKQVRIVTRNLGVIDPTKIEEYIARDGYFALAKALQMKPEDVIKEIKDSGLRGRGGAGFPTGLKWELAARQKAEKKFVVCNADEGDPGAFMDRSVLEGDPHAVIEGMAIAAYAIGAQKGFVYVRAEYPLAIERLNIALNQAREYGFLGGNIMGTDFSFDIEIRIGAGAFVCGEETALMASIEGERGQPKVKPPYPVEKGLWGYPTVINNVETLANVPWIIRNGAKEFRKYGTENSPGTKVFALAGKVKNTGLVEVPMGITLRELIYEIGGGIAGDKKLKAIQTGGPSGGCIPAEYVDTPVDFESLQKLGAIMGSGGMIVMDEDDCMVDVARFFLEFTVEESCGKCTPCREGTKKMLEILEKITSGEGTEEDIEELEKLAHVVKDTSLCGLGQTAPNPVLSTLRYFRDEYLAHVKEKRCPSKKCKALISYVIDPEKCVGCTACARVCPVQCISGQVRQPHVIDQAECVRCGSCIEVCRFGAISKVTPALPVEEAVELast
1 -98.000sp|P49821|NDUV1_HUMAN NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Homo sapiens GN=NDUFV1 PE=1 SV=4  ali follow..  33  2.............................................................................LATRRLLGWSLPARVSV-RFSGDTTAPKKTSFGSLKDEDRIFTNLYGRHDW-RLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLRGRGGAGFPTGLKWSFMNKPSGRPKYLVVNADEGEPGTCKDREILRHDPHKLLEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQHQARQAAS.................................................................... 464
2 -13.300sp|P19404|NDUV2_HUMAN(removed signalp:1-11) NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Homo sapiens GN=NDUFV2 PE=1 SV=2  ali follow..  25  115.PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGETTPDKLFTLIEVECLGACVNAPMVQINDN--YYEDLTAKDIEEIIDELKAGKIP....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 203
3 -12.700sp|O00217|NDUS8_HUMAN(removed signalp:1-19) NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Homo sapiens GN=NDUFS8 PE=1 SV=1  ali follow..  22  3..................................................................................................................................................................................................................................................................................................................................................................................................................................PGGRSLHSSAVAATYKYVNMQDPEMDMKSVTDRAA-------------------------RTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRFRGEHA---------------LRRYPSGEERCIACKLCEAICPAQAITSRRTTRYDIDMTKCIYCGFCQEACPVDAIV............. 147
4 -11.000sp|Q12882|DPYD_HUMAN Dihydropyrimidine dehydrogenase [NADP+] OS=Homo sapiens GN=DPYD PE=1 SV=2  ali   15  11.........................................................................................................................................................................................................................................................................................................................................................................................................TYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSA---------NQDFTVIEDYCTGLKA---YLKSIEELQDWDGQSPATVSHQKGKPVPRIAELMDKKLPSFGPYLEQRKKIIAENKIRLVVAMIDEEMCINCGKCYMTCNYQAIQFDPETHLPTITDTCTGCTLCLSVCPIVDCIKMVSRTTPYEPKR 265
5 -10.500sp|Q16134|ETFD_HUMAN Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Homo sapiens GN=ETFDH PE=1 SV=2  ali   13  1.........................................................................................................................................................................................................................................................................................................................................................................................................................................................VRNIRPSC-HGVLG------GGMI-YTGIFYWILRGMEPWTLKHKGSDFERLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTLRDDSIPVNRNLSIYDGPEQRFCPAGVYEQGDGFRLQINAQNCVHCKTCDIKDPSQNINWVVPEG....... 158
6 -6.370sp|Q01196|RUNX1_HUMAN Runt-related transcription factor 1 OS=Homo sapiens GN=RUNX1 PE=1 SV=3  ali follow..  19  49............................................................................................................................................RSMVEVLADHPGELVRTDSPNFL-----SVLPT--HWR---------------CNKTLPIAFKVVALGD-----VPDGTLVTVMA-GNDENYS---AELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNP-PQVATYHRAIKITVDGPR-EPRRHRQ.............................................................................................................................................................................................................................................................................................................. 181
7 -6.240sp|Q13950|RUNX2_HUMAN Runt-related transcription factor 2 OS=Homo sapiens GN=RUNX2 PE=1 SV=2  ali follow..  19  100............................................................................................................................................RTMVEIIADHPAELVRTDSPNFL-----SVLPS--HWR---------------CNKTLPVAFKVVALGE-----VPDGTVVTVMA-GNDENYS---AELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNP-PQVATYHRAIKVTVDGPR-EPRRH................................................................................................................................................................................................................................................................................................................ 230
8 -5.960sp|Q2I0M5|RSPO4_HUMAN(removed signalp:1-19) R-spondin-4 OS=Homo sapiens GN=RSPO4 PE=1 SV=2  ali follow..  15  17...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCNGCSTCQQRLFLFIRREGIRQYGKCLHD-----------------CPPG------------YFGIRGQEVNRCKKCGAT-CESCFS----QDFCIRCGKCLPTCPPGTLAHQNTRECQGECELGPWWSPCTHNG................... 135
9 -5.910sp|B2RUY7|VWC2L_HUMAN(removed signalp:1-21) von Willebrand factor C domain-containing protein 2-like OS=Homo sapiens GN=VWC2L PE=2 SV=1  ali follow..  11  45..............................................................................................................................................................................................................................................................................................................................................................................................................................................................RFFPGHSNCPCV-CALDGPVC------------DQPECPKIHPKCTKVEHNGCCPECKEVKNFCEYHGKNYKIL--EEFKPSPCEWCRCEPSNEVHCVVADCA-CPVCKNGPNCFAGTTIIPAGIEVKVDECNIC-HCHNWKPAQCSKRECQ......... 196
10 -5.660sp|Q6UXX9|RSPO2_HUMAN(removed signalp:1-21) R-spondin-2 OS=Homo sapiens GN=RSPO2 PE=1 SV=2  ali follow..  17  19..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CKGCNGCSRCQQKLFFFLRREGMRQYGECLHS-----------------CPSG------------YYGHRAPDMNRCARCRIENCDSCFS----KDFCTKCGRCFDECPDG---------FAPLEETMECVEGCEVGH................... 128

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 5 5 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Doctor KS, Reed JC, Godzik A., Bourne PE. The apoptosis database. Cell Death Differ. 2003 Jun;10(6):621-33. Review.