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Query: TM0013 TM0013 281894 Purified-2001-08-24, from T.maritima

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MFENEILFDNGQHKFMFLGWEEKEEEIVQTNQYLILDGNEGILLDPGGAHVFPRVMSNVAEVVDLSSIRHIFYTHQDPDVTSGILLWLSICENAKIYISSLWVRFLPHFGIYDQKRIVPISDKGTKIKLLSGNELEILPAHFLHSTGNFVLYDPVAKILFSGDIGAAVFEKGKRYRYVDDFERHLPLMEAFHKRYMSSNAACKKWVDMVSKKKIDMIAPQHGAVFRGESVKKFLEWFRNLKCGVDLIDNLYSLLast
1 -37.900sp|Q53H82|LACB2_HUMAN Beta-lactamase-like protein 2 OS=Homo sapiens GN=LACTB2 PE=1 SV=2  ali follow..  20  30............................GTNTYLVGTGPRRILIDTGEPAI-PEYISCLKQALTEFAIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPRNPQREEIIGNGEQQYVYLKDGDVIKTEGATLRVLYTP-GHTDDHMALLLEEENAIFSGDCILGEGTT-----------------------VFEDLYDYMNSLKELLKIKADIIYPGHGPVIHNAKIQQYISHRNIREQQILTLFR.... 229
2 -36.700sp|Q68D91|MBLC2_HUMAN Metallo-beta-lactamase domain-containing protein 2 OS=Homo sapiens GN=MBLAC2 PE=1 SV=3  ali follow..  12  8...AHKSLGDGIFWIQ----ERFYESGNRANIWLVRGSEQDVVIDTGLG--LRSLPEYLYSSGAARRPLLAVATHVHFDHSGGLYQFDRVAAEAEALARGDNFETVTWLSDSEVVRTPTLILQDGDVINLGDRQLTVMHMP-GHSRGSICLHDKDRKILFSGDVVYDGSLIDWLPYS--------------------RISDYVGTCERLIELLVEKVLPGHFNTFGAERLFRLASNYISKAGICHKVST.... 259
3 -28.800sp|A4D2B0|MBLC1_HUMAN Metallo-beta-lactamase domain-containing protein 1 OS=Homo sapiens GN=MBLAC1 PE=2 SV=1  ali follow..  18  66...........................GGAEAALEEAARGPILVDTGGPWAREALLGALAGQVAPGDVTLVVGTHGHSDHIGNLGLF----PGAALLVSHDFCLPGGRYLPHGLGEGQPLRLGPG---------LEVWATP-GHGGQRDVS------VVVAGTALGTVVVAGDVFERDGDEDSWQA--------LSEDPAAQERSRKRVLVV-ADVVVPGHGPPFR........................... 236
4 -25.900sp|O95571|ETHE1_HUMAN Protein ETHE1, mitochondrial OS=Homo sapiens GN=ETHE1 PE=1 SV=2  ali follow..  18  33...........................SCTFTYLLGDREEAVLIDPV-LETAPRDAQLIKEL----RLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADLH------------IEDGDSIRFGRFALETRASP-GHTPGCVTFVLNDHSMAFTGDALLIRGCGRTDFQQGC------------------AKTLYHSVHEKIFTLPGDCIYPAHD............................... 196
5 -22.500sp|Q6PII5|HAGHL_HUMAN Hydroxyacylglutathione hydrolase-like protein OS=Homo sapiens GN=HAGHL PE=2 SV=1  ali follow..  12  14...............................MYLVIETREAVAVDVAVPKRLLEIVGREG------SLTAVLTTHHHWDHARGNPELARLRPGLAVLGADERIFSLTR------------RLAHGEELRFGAIHVRCLLTP-GHTAGHMSYFCPDPPALFSGDALSVAGCG---------------------SCLEGSAQQMYQSLAELGTLPPETVFCGHEHTLSNLEFAQKVE.................. 186
6 -22.400sp|Q8N490|PNKD_HUMAN Probable hydrolase PNKD OS=Homo sapiens GN=PNKD PE=1 SV=2  ali follow..  16  127...........................LSDNSYLIIDAQLAVAVDPSDPRAVQASIEKEG------TLVAILCTHKHWDHSGGNRDLSRRHRDCRVYGSP-----------QDGIPYLTHPLCHQDVVSVGRLQIRALATP-GHTQGHLVYLYKGPSCLFSGDLLFLSGCG---------------------RTFEGNAETMLSSLDTVLGLGDDTLWPGHEYAEENLGFAGVVE.................. 305
7 -20.400sp|Q16775|GLO2_HUMAN Hydroxyacylglutathione hydrolase, mitochondrial OS=Homo sapiens GN=HAGH PE=1 SV=2  ali follow..  14  62...............................MYLVIDTKEAAIVDPVQPQKVVDAARKHG------KLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDDRIGALTH------------KITHLSTLQVGSLNVKCLATP-CHTSGHICYFGSEPPAVFTGDTLFVAGCG---------------------KFYEGTADEMCKALEVLGRLPPDTVYCGHEYTINNLKFARHVE.................. 235
8 -17.200sp|Q9UKF6|CPSF3_HUMAN Cleavage and polyadenylation specificity factor subunit 3 OS=Homo sapiens GN=CPSF3 PE=1 SV=1  ali   12  23...........................VGRSCIILEFKGRKIMLDCGIHPGLEGMDAPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKRARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQN.............. 259
9 -15.300sp|Q9BQ52|RNZ2_HUMAN Zinc phosphodiesterase ELAC protein 2 OS=Homo sapiens GN=ELAC2 PE=1 SV=2  ali   14  32.............EIIFLGTGSAIPMKIRSATLVNISPDTSLLLDCGEGTFGQLCRHYGDQVRVLGTLAAVFVSHLHADHHTGLPSILLQLHPLLVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCLQEGAEIEEFQTCLVRHCKHAFLVHTSGWKVVYSGDTLVRMGKDATLLIHEATLEDGLE-----EEAVEKTHSTTSQAISVGMRMNAEFIMLNH................................ 274
10 -14.500sp|Q6IQ20|NAPEP_HUMAN N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D OS=Homo sapiens GN=NAPEPLD PE=1 SV=2  ali follow..  11  130...........................LGHATVMVEMDELIFLTDPIFSSRASRFRRSPCTISELPPIDAVLISHNHYDHLNSVIALNERFGNELRWFVPLGLDWMQKCGCENVIEL-------EENCVPGHDKVTFVFTPSQHWCKSWSVLGPWNRFFFAGDTYCPAFEEIGKRFGPFDLAAIPIGAYEPRWFMKYQHVDPEEAVRIHTDVQTKKSMAIHWGTFALEPPVKLNEALERYGLNAEDFFVL... 378
11 -14.300sp|Q5TA45|INT11_HUMAN Integrator complex subunit 11 OS=Homo sapiens GN=CPSF3L PE=1 SV=2  ali follow..  12  15...........................VGRSCILVSIAGKNVMLDCGDDRRFPDFSYITQNGRLTDFLDCVIISHFHLDHCGALPYFSEMVGDGPIYMTHPTQAICPSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLITESTYATTIRDSKRDFLKKVHETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFS.... 268
12 -13.600sp|Q9H816|DCR1B_HUMAN 5` exonuclease Apollo OS=Homo sapiens GN=DCLRE1B PE=1 SV=1  ali follow..  15  1.............................MNGVLI--PHTPIAVDF--------------SLRRAGTARLFFLSHMHSDHTVGLSS------ARPLYCSPITAHLLHRHLQVSKQWIQALEVGESHVLPLGQETMTVTLLDANHCPGSVMFLFEGYTILYTGD------------------------FRYTPSMLKEPALTLGKQIHTL--LDNTNCNPALVLPSRQEAAHQIVQLIRKHPQHNIKIGLSLG. 185
13 -13.500sp|Q6PJP8|DCR1A_HUMAN DNA cross-link repair 1A protein OS=Homo sapiens GN=DCLRE1A PE=1 SV=3  ali   16  109......................................GTGFTVDA--------------QYGVVEGCTAYFLTHFHSDHYAGLSK------TFPVYCSEITGNLLKNKLHVQEQYIHPLPL--DTECIVNGVKVVLLDA---HCPGAVMILFYLPNILHTGDF---------------------------ADPSMERSLLADQKVHML--LDTTYCSPEYTFPSQQEVIRFAINTAFEANPHALVVCGTYSI 281
14 -13.500sp|Q9P2I0|CPSF2_HUMAN Cleavage and polyadenylation specificity factor subunit 2 OS=Homo sapiens GN=CPSF2 PE=1 SV=2  ali   13  16...........................ESALCYLLQVDEFRFLLDCGWDEHFSDIIDSLRK--HVHQIDAVLLSHPDPLHLGALPYAVGKLGNCAIYATIPVYKMMYDLYQSRHNTEDFTLFTLDDVLKGKGHGLSITPLPAGHMIGGTIWKDGEEEIVYAVDF--NHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQ........... 252
15 -12.800sp|P78559|MAP1A_HUMAN Microtubule-associated protein 1A OS=Homo sapiens GN=MAP1A PE=1 SV=6  ali   20  49..............................DSALFAVNGFNILVDGGSDRKSCFWKLV-----HLDRIDSVLLTHIGADNLPGINGLLQRKVAELEEEQSQGSS..................................................................................................................................................... 118
16 -12.700sp|P46821|MAP1B_HUMAN Microtubule-associated protein 1B OS=Homo sapiens GN=MAP1B PE=1 SV=2  ali   16  121..............................DSALFAVNGFNMLINGGSERKSCFWKLI-----HLDRVDSILLTHIGDDNLPGINSMLQRKIAELEEEQ.......................................................................................................................................................... 185
17 -11.900sp|Q96SD1|DCR1C_HUMAN Protein artemis OS=Homo sapiens GN=DCLRE1C PE=1 SV=2  ali   13  1.............................MSSF-QMAEYPTISIDR-----------------ENLRARAYFLSHCHKDHMKGLRARLECSLKVYLYCSPVTKELLLTIISIEIETPTQISLVDEASGEKEEIVVTLLPA---HCPGSVMFLFQGNTVLYTGDLLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYL--FTNLSEELGVQVHV....... 229
18 -11.500sp|Q9BQ52|RNZ2_HUMAN Zinc phosphodiesterase ELAC protein 2 OS=Homo sapiens GN=ELAC2 PE=1 SV=2  ali   63.....................VAAGSRDSGAALYVFSEFNRYLFNCGEGVQ----RLMQEHKLKVARLDNIFLTRMHWSNVGGLSGMILTLPKCVLSGPPQLEKYLEIFSGPLKGIELAVRPHSAPEYEDETMTVYQIPIHSEQRRGKHQPWQSPERPL-RSSDSESNENEPHLPHGVSQRRGVRDSSLVVAFICKLHLKRGNFLVLKAKEMGLPVGTAAIAPIIDGKSIT...................... 285
19 -10.600sp|Q9H777|RNZ1_HUMAN Zinc phosphodiesterase ELAC protein 1 OS=Homo sapiens GN=ELAC1 PE=2 SV=2  ali follow..  18  4.............DVTFLGTGAAYPS--GASAVVLRCEGECWLFDCGEGTQ----TQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTIQPIEIYGPVGLRDFIWRT................................................................................................................................................ 106
20 -10.300sp|Q9BQ52|RNZ2_HUMAN Zinc phosphodiesterase ELAC protein 2 OS=Homo sapiens GN=ELAC2 PE=1 SV=2  ali   17  182.............EIIFLGTGSAIPMKIRSATLVNISPDTSLLLDCGEGQLCRHYGDQVDRVL--GTLAAVFVSHLHADHHTGLPSILLQRERALVVAPNQLKAWLQQY................................................................................................................................................ 291

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 8 0 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Jaroszewski L, Bierzynski A, Godzik A. Multiple model approach--dealing with alignment ambiguities in protein modeling. Pac Symp Biocomput. 1997;:328-39.