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Query: TM0002 TM0002 281883 Purified-2001-08-29, from T.maritima

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40
# Score Template Links and tools%idFirst MSPEDWKRLICFHTSKEVLKQTLDDAQQNISDSVSIPLRKYLast
1 -2.140HGC00518 gi|162728471|dbj|BAAY01000490.1|2.0 TMP00574;  ali follow..  18  2...............DEAVAMAQDAIGLMLEDCEVCP.... 23
2 -1.780PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;  ali follow..  35  172.............DAKTNLTAKLDEASKLLADS........ 191
3 -1.460HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709;  ali follow..  6............NNDDVLVKKFFSENRIDVPDD........ 26
4 -1.300HGC00857 gi|162620543|dbj|BAAW01002606.1|2.0 TMP01139;  ali follow..  13  12IQQEIYARMIMYNFVQMITSHVVIVKKQR............ 40
5 -0.858PB030138 Q7MX14_PORGI/1-113 PB030138; Pfam-B_30138;  ali follow..  22...........YDQRRDELEKRIERIRREVE.......... 41
6 -0.731HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833;  ali follow..  12  77SLPDTFGNQI---INEWFASKGLSGEEITPLDRLC...... 108
7 -0.721PB004718 Q5LIA4_BACFN/1-189 PB004718; Pfam-B_4718;  ali follow..  14  40..................RATMYGVGYTNVFDTYLSPQE.. 60
8 -0.634PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890;  ali follow..  41  1MDPSPWGRFGCY............................. 15
9 -0.615HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;  ali follow..  17  1MTPHQLKKL---NNSSSLTKKNMTMEENTVHPARKLLLGQL 42
10 -0.557HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066;  ali follow..  15.......TVLVVEPMKAPYVKHIPNELEDLQQAVG...... 42

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 5 5 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Lesley SA, Kuhn P, Godzik A., Deacon AM, Mathews I, Kreusch A, Spraggon G, Klock HE, McMullan D, Shin T, Vincent J, Robb A, Brinen LS, Miller MD, McPhillips TM, Miller MA, Scheibe D, Canaves JM, Guda C, Jaroszewski L, Selby TL, Elsliger MA, Wooley J, Taylor SS, Hodgson KO, Wilson IA, Schultz PG, Stevens RC. Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline. Proc Natl Acad Sci U S A. 2002 Sep 3;99(18):11664-9. Epub 2002 Aug 22.