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Query: TM0014 TM0014 281895 Purified-2001-01-30, from T.maritima

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MREREIVDKLTSAFFAENTIISFTSQLDEALTRKLRRMQRRIEEVKERFVNLNRLFQELVGDFQAKSDQLVSVIQDMEKISENIMEELKKSGTNVDQIVERVKEASSQIGETLENIRSIEKLIQNIMRIARETNILALNATIEAARAGEAGKGFMIVANEVQNLSNETNEVTKQIVEKAREILESSQRSLENLEFMANLFETVGKTLQNMVRFMENNVKLLQEVRNSLDTSKESLSEKSAEIDSATKVLEETAGGFTTINRVINSVITAQRKLKDLKILast
1 -4.910PB050904 Q64SA2_BACFR/1-230 PB050904; Pfam-B_50904;  ali follow..  7  41...............................................................NELINGQIEKQIKGQTQTALLQNSIATEFNQIHKWEKQYNSYLKTASGYASSLKACTHLYNDGVRIFLT-----LGKLGKAIQNNPQGIVASMNMNNLIETATELVSVFTLLNDAVNENMLTGAERSKTLWALNDQLSDFSRKLHLLYLSIR............................................................... 192
2 -4.170PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8]  ali follow..  8  8.........................................................................VQAEQQRLEAVTAQVADVEQSLEKTKAAAEKQKKKLEALQKETKAARATALTVQDIEA------------MGKKATFGNNITLTPDECRTLKDYAVSSKLKYKQKYEQAEKSASVWKRRFEALNEKYLELKKKAQPYLDALEIASEKVRAFLDAV.................................................. 156
3 -3.940PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;  ali follow..  11  64.........................EAKEACVTAADTVRNNANEYNALLNGDAADAAAVKAEQVKDSKTVESLGKELKASAPEYEGCVAENAQGLDAAAVKLNEQADWYE---THEKSLSKAVRAVVESKAAKRL-NLTAKLDEASKDSDGK----VADN...................................................................................................................... 198
4 -3.770HGC00921 gi|162841401|dbj|BABA01003308.1|3.0 TMP01242;  ali follow..  10  36..........................................LKTLGEARIFLSKFETAHSYYVHCYGEQSRNSKKHQANVKTARLYISHFIQVLNLAVIRME-----IKESHKALYGLPVDNFSVPDLSSEASLAEWGQKIIEGERKRTSQGGIPIYNPTIAKVKVHYDIFMEGYEKQKSLQSLTNRSLEQLASMR---VQADRLILDIWNQVEAKFQDVSPNEKRLEKCRD............................................. 218
5 -3.760PB000520 Q9RVX4_DEIRA/1-194 PB000520; Pfam-B_520;  ali follow..  8  15.........................................................................................................PVLLSGAVTLKRMPQPVTALLAAMITPAVLISGAGTLIMSTSTRVGR----ATDRVRGLTSRFKQLVSAEGQNEPLAREEKRLIIRQLPRLSRRTRFLMRALQAFYTSV................................................................ 119
6 -3.690PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946;  ali follow..  12  237..........................................................................................................ESIDEYYNEGKTQGICVFGSGYYKKDTLILSARETVEVD------RTLEVV--QCHGKHNQDTEYHERIIDLVNKNANLIRERMKA...................................................................................... 322
7 -3.610PB034679 gi|150005530|ref|YP_001300274.1| hypothetical protein BVU_3014 [Bacteroides vulgatus ATCC 8482]gi|149933954|gb|ABR40652.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]  ali follow..  10  5................................................................RSIHEIINTIFVAKGLLVEMFEKRKVLSFRYSDALALLKEDENRLKILIEKEARFLDFFELLLEANEEINTATVEENIEYLHQSRKESYVRNIKITFQKLARVTIRNIINLQHNIDNAEPTYQIKIAKLQNLDKKRINIQRLIDSTEHLILHEERDFFRQATD-EELTRILLELRQELQLSAHSLIRAQQDIINYLNQIKNQVILVEKIRKVK. 242
8 -3.040HGC00803 gi|163280588|dbj|BABD01030100.1|2.0 TMP01051;  ali follow..  18  33.........................................................................VDKVKDELQKVIDLLESGETDTEVIQETLDEAVCGINDLQEEFDENDSEIETVDCIGVTVAYILIPIDIEEA..................................................................................................................................... 110
9 -2.490PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791;  ali follow..  11  23........................................................................................................................NLLLVLLLIIYNTTTSNLKDKYKRLVKGTDGKNIESVLMQHIEKVEEAQVEVEKVHKRLDIINNRMSFCIQKVGMVRNAFADMGSDLSYSYALLDENNNGM--IITGI-YGRSETVTYAKPVKDGKSNYSLSVEELQALQRAKEN............. 165
10 -2.170HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;  ali follow..  12  6............................................................................................................................................................VSHQLKKLNNSSSLTKKNMTMEENTVHPARK........................................................................................... 36
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.