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Query: TM0016 TM0016 281897 Purified-2001-08-24, from T.maritima

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRMSLKSWKEIPIGGVIDKPGTAREYKTGAWRVMRPILHKEKCIDCMFCWLYCPDQAIIQEGGIMKGFNYDYCKGCGLCANVCPKQAIEMRPETEFLSEEGLast
1 -6.970PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890;  ali follow..  22  1...................................................................MDPPVCSGCYLLLFACPIIFASIMKKE....... 32
2 -5.310PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;  ali follow..  13  33......................................ETDASTQYNDLFSYCHFG--------------EDKPACKHCPIHC.................. 70
3 -4.330HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;  ali follow..  14  3.......................VDTKLINLKLWGYITMKKMIAYCGLDCEKCDAYIATINDNQEILPEHINCQGCVFCDNMCGIRQCALEKGVATCGD.. 101
4 -4.080PB012386 gi|82541244|ref|XP_724876.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii str. 17XNL]gi|23479680|gb|EAA16441.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii]  ali follow..  13  138..............................................................ENFEGYSYKKIYKCDFCDDIYDNLREATKHENSHFQHD. 175
5 -4.010PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;  ali follow..  11  22.....................................APRTDCPKREQCLRASAYDGVLARGLQKITVNPLIPTSEQGCKAFADNTPVLFAHGITHLYDE. 85
6 -2.870PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]  ali follow..  5...............FVEREAAAYDEAAVMANKQARLDAEKSINMVGSGVMHCPGSMARSIFRRPAAASGEAVQASSYEQAAVECVQNTTDKTVNQQAGDI 98
7 -2.770PB004588 Q64QH1_BACFR/1-389 PB004588; Pfam-B_4588;  ali follow..  11  1...................................................MCTTNAVNEKISYTINMDTQKVSCFLLLAGACDNSDRIETETQA...... 54
8 -2.670PB035451 Q3Z7G7_DEHE1/1-135 PB035451; Pfam-B_35451;  ali follow..  12  29..............................................GACPFFKAGDEFILKRTPEQDDFYHLMDG-KFCGEACNDGTQPVIFKIERIDIPE 113
9 -2.670PB002589 gi|91201099|emb|CAJ74158.1| hypothetical protein [Candidatus Kuenenia stuttgartiensis]  ali follow..  22  446..........................................................ARRQQGLYQLFKDFCESCNKCA..................... 471
10 -2.600PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276;  ali follow..  44.............GIQMSFNQLTMDSTFQSIAPVKKFLQIDYCIEGCYEVEYQNGTVSFLGEGDLCVTDLSRQVFVSSRLPLRKYRGVTLFLEVEKAQH.. 129

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 6 2 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.